CK933032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_NATPD (30S ribosomal protein S3Ae OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13 Identity = 51/194 (26.29%), Postives = 89/194 (45.88%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 742 WY + AP F +G+T E + R + +LG+L N+ K+ + DV T+F T D LRSL R+ + ++A+V V TTD++ +++ + +T T A SQ + IR M +++ AA L++ + + I +IYPL+ V I+K ++ +P+ Sbjct: 15 WYTVMAPEIFDRAELGETPADEP-------EQVYDRTVQTTLGELQNDPSENNTKLTFQISDVGSDTAYTDFVQHELTRDYLRSLTRRGTSKVDAFVTVLTTDDYRVQVQPVAYT---------TKSADRSQEQAIRSTMVDLVEESAADNTFADLIDSIVEGRLSSAIYNEAKTIYPLRRVEIQKTRLQASPE 192
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_SULSO (30S ribosomal protein S3Ae OS=Sulfolobus solfataricus GN=rps3Ae PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13 Identity = 56/205 (27.32%), Postives = 92/205 (44.88%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WY + P F ++G T +T+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + I + DV T D G+ R+ V T SQ IR+ + E + +A+ ++ + + EI +A IYPL+ I K K+LK P+ +LGK +E Sbjct: 17 WYSVITPKAFGEVSLGSTPAYDITQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETVSKKASELSFDDFTQEVVFGRLANEIFEAAKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_METM7 (30S ribosomal protein S3Ae OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13 Identity = 57/202 (28.22%), Postives = 92/202 (45.54%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WYDI P F G ++ +T A+ L R+ E+SL DL NE ++ + + V G N + F G + T + L+S VR+ + I A VDV+T D F LR+ + T A+ +IR KM +I+ A V + +G +I ++PL ++V+I K+ + GK++E Sbjct: 24 WYDIYTPQSF-----GGDVIGQTPANDPAT--LIGRISEISLRDLTNEHSKHMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVDVRTKDGFKLRVKALVLT---------AVRARDHHKTEIRVKMEQIIKDMAKETAFAEFVHAMLMGGLGSKIYGDCKKMFPL-----KRVEIFKSEVLEFGKVVE 204
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_HALWD (30S ribosomal protein S3Ae OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13 Identity = 54/194 (27.84%), Postives = 87/194 (44.85%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 742 WY I AP F +G T E + R EV+LGD+ ++ K+ + DV T F D LRSL+R+ + I+A + V+TTD++ ++L + FT T A SQ + IRR M +++ A L++ I + I +IYPL+ V ++K+ + P+ Sbjct: 15 WYSIIAPEQFDRSELGSTFADDP-------EKIHGRTLEVTLGDITGDQGENNTKLTFKVNDVTSDAAYTEFIKHELARDYLRSLIRRGASKIDAAITVRTTDDYRVQLQPVAFT---------TKKADRSQEQAIRRVMIDLVEDAADERTFADLIDAAIEGQLSSAIYGEAKTIYPLRRVEVKKLTLEARPE 192
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_METVS (30S ribosomal protein S3Ae OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13 Identity = 53/194 (27.32%), Postives = 88/194 (45.36%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 742 WY+I P F +G+T L R+ E+SL DL NE ++ + + V G N +T F G + T + L+S +R+ + I +DV+T D F +R+ + T V+ Y +T +IR KM +I+ A V + +G +I ++PL+ V I K ++L+ K Sbjct: 24 WYNIYTPQSFGGDVIGQTPANDPSA-------LMGRISEISLRDLTNEHSKHMTRMYFKVDGVSGNNAITQFVGHDTTREYLKSQIRRRRSKINVIIDVRTKDGFKVRVKALVLT-----AVRARDYHKT----EIRVKMEQIIKEMANETAFAEFVHAMVMGGVGSKIYSECKKMFPLKRVEIFKSEVLEFGK 201
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_METM6 (30S ribosomal protein S3Ae OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13 Identity = 57/202 (28.22%), Postives = 91/202 (45.05%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WYDI P F G ++ +T A+ L R+ E+SL DL NE ++ + + V G N + F G + T + L+S VR+ + I A VDV+T D F LR+ + T A+ +IR KM +I+ A V + +G +I ++PL ++V+I K+ + GK +E Sbjct: 24 WYDIYTPQSF-----GGDVIGQTPANDPAT--LIGRISEISLRDLTNEHSKHMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVDVRTKDGFKLRVKALVLT---------AVRARDHHKTEIRVKMEQIIKDMAKETAFAEFVHAMLMGGLGSKIYGDCKKMFPL-----KRVEIFKSEVLEFGKAVE 204
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_METS3 (30S ribosomal protein S3Ae OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12 Identity = 53/190 (27.89%), Postives = 90/190 (47.37%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKIL 730 WY IK P F + +G+T + L R EV++ +L + Y K+R ++V G T F G TTD +RS++R+ + I+A VKT D+ ++L + T R A++SQ + +R+ + +++ AA L++ + + E+ IYPL+ V I K K+L Sbjct: 19 WYTIKTPVNFEDKEIGETPARDP-------DYLIGRGVEVTMRELSGDFSKQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLAVTTR---------RAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYHNAKKIYPLKRVEIIKSKVL 192
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_STAMF (30S ribosomal protein S3Ae OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12 Identity = 53/195 (27.18%), Postives = 90/195 (46.15%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLK--HRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 WY++ AP F G ++ GT A + LK RV E +L D+ + + ++ + DV+ +T F G + D ++SL+R+ + I+ +V T D + LRL I T + +TSQ R IR+ M E + + L L+ + + + I + IYP++ V + K K+L P Sbjct: 18 WYEVIAPPVF-----GNIVI----GTTPADDPLKLIGRVMETTLYDITGDITQVHVRLYFQIIDVKENKAITRFKGHELSRDYIKSLIRRKSSKIQGIFNVVTKDGYHLRLTIIALT---------SYRCKTSQKRAIRKIMEEYVKERVPQLTLDELIHEMVFGKMSAVIAERARKIYPIRKVEVYKSKLLMIP 194
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_METM5 (30S ribosomal protein S3Ae OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12 Identity = 55/202 (27.23%), Postives = 90/202 (44.55%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WYDI P F G ++ +T A+ L R+ E+SL DL NE ++ + + V G N + F G + T + L+S VR+ + I A VDV+T D F +R+ + T A+ +IR M +I+ A V + +G +I ++PL ++V+I K+ + GK +E Sbjct: 24 WYDIYTPQSF-----GGDVIGQTPANDPAT--LIGRISEISLRDLTNEHSKHMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVDVRTKDGFKVRVKALVLT---------AVRARDHHKTEIRINMEQIIRHMAKETAFAEFVHAMLMGGLGSKIYGDCKKMFPL-----KRVEIFKSEVLEFGKAVE 204
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_METMP (30S ribosomal protein S3Ae OS=Methanococcus maripaludis GN=rps3Ae PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11 Identity = 54/202 (26.73%), Postives = 90/202 (44.55%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WYDI P F G ++ +T A+ L R+ E+SL DL NE ++ + + V G N + F G + T + L+S VR+ + I A V+V+T D F +R+ + T A+ +IR +M +I+ A V + +G +I ++PL ++V+I K+ + GK E Sbjct: 24 WYDIYTPQSF-----GGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSKHMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLT---------AVRARDHHKTEIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYGDCKKMFPL-----KRVEIFKSEVIEFGKAAE 204 The following BLAST results are available for this feature:
BLAST of CK933032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933032 ID=CK933032; Name=CK933032; organism=Citrus sinensis; type=EST; length=770bpback to top |