CK933032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_HALLT (30S ribosomal protein S3Ae OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11 Identity = 54/193 (27.98%), Postives = 85/193 (44.04%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 WY + AP F + +G+TL + + R +LG+L + K+ + DV T F T D LRSLVR+ + +EA + V TTD++ +R+ + T T A SQ + IRR M + + A A +S V+ + + I IYPL+ V I+K+ + P Sbjct: 15 WYSVLAPEQFDRQELGETLAEEP-------DQVVGRTITTTLGELTGDSGANNTKLTFKITDVGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT---------TKKADRSQEKAIRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKLIYPLRRVEIQKLTLEARP 191
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_IGNH4 (30S ribosomal protein S3Ae OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11 Identity = 52/193 (26.94%), Postives = 82/193 (42.49%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 WY+I P F +VG+T + K+ + +++++ GD H Y +++ D + T F G D +RSL R+ + IE DV T D + LR+ FT QTSQ R IR+ +E++ L ++ + I EI IYP++ I K K+L P Sbjct: 18 WYEIITPDVFNNVSVGQT--PADEAWKLIGRTVDTTLYDIT-GDFTYVHVHVY--LQINKVDEEALKAYTIFKGHELARDYIRSLTRRKSSKIEGIFDVWTKDGYGLRITVDTFT---------AYRCQTSQKRAIRKIQKEVIEEMVPQMTLDEVINAMLFGDIAEEISNRARKIYPIRRTEIYKSKVLYMP 196
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_METJA (30S ribosomal protein S3Ae OS=Methanocaldococcus jannaschii GN=rps3Ae PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 45/159 (28.30%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 266 RVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 742 RV E SL DL + ++ + V G + ++G + T + ++S +R+ + I+A +DVKT D +R TK + R A T Q IR+KM EI+ A A V+ + + +I+ I+P++NV I K ++L K Sbjct: 53 RVAETSLRDLTGDPTKHMHRVYFKIFGVTGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDGHKIR------TKAMVLTAYR---ANTKQKSDIRKKMEEIIKAMAKEKTFPQYVQAMLFGEMAEKIKNECKKIFPIKNVIIYKSEVLSLAK 202 The following BLAST results are available for this feature:
BLAST of CK933032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933032 ID=CK933032; Name=CK933032; organism=Citrus sinensis; type=EST; length=770bpback to top |