CK933035

Overview
NameCK933035
Unique NameCK933035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3163 contig Csv1_Contig3163:69..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 2.971e-71
Identity = 130/201 (64.68%), Postives = 157/201 (78.11%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            I KDVTELIG+TP+VYLN V DGCV R  AKLE M+PCSSVKDRI YSMI DAE+KGLITPG +VLIE TSGNTGIGLAF+AA++GYKL + MP++ S+ERRIIL+A GAE+ L DP +G +G VKK EEI  +TPN YIL QFENPANP+I+YETTGPEIW  + GK+D                R+L+E+NPN+K+YG+
Sbjct:    8 IAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELVLTDPLLGMKGAVKKAEEIQAKTPNSYILQQFENPANPKIHYETTGPEIWKATAGKIDGLVSGIGTGGTITGTGRYLREQNPNVKLYGV 208          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK2_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.474e-70
Identity = 128/201 (63.68%), Postives = 159/201 (79.10%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            I  DVT LIG+TP+VYLN VVDGC A+IAAKLE+M+PCSSVKDRI YSMI DAE+KGLITPGK+VLIE TSGNTGIGLAF+AA++GYKLI+ MP++ S+ERRIIL+A GAE+ L DP +G +G ++K +E+  + PN YIL QFENPANP+I+YETTGPEIW  + GKVD                ++LKE+NP IK+YG+
Sbjct:    8 IASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLTDPLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKATAGKVDILVSGIGTGGTVTGTGKYLKEQNPEIKIYGV 208          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 4.290e-70
Identity = 126/201 (62.69%), Postives = 156/201 (77.61%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            I  +  +LIG TPMVYLNNVV GCVA +AAKLE+M+PC SVKDRI YSMI DAE+KGLITPGK+VL+E TSGNTGIGLAFIAAS+GYKLI+ MP++ S+ERR++LRA GAE+ L +PA G  G ++K EEIL +TPN Y+L QF+NPANP+I+YETTGPEIW D+ GK+D                RF+KE+ P +KV G+
Sbjct:   75 IADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEPAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIGTGGTITGVGRFIKERKPELKVIGV 275          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSKP_SPIOL (Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 2.780e-69
Identity = 128/201 (63.68%), Postives = 156/201 (77.61%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            I +DV++LIG TPMVYLNNV  G VA IAAKLE M+PC SVKDRI YSMI DAE KG+ITPGKT L+E TSGNTGIGLAFIAA+RGYK+ + MP++ S+ERR+IL+A GAE+ L DPA G +G V+K EEIL +TP+ Y+L QF+NPANP+I+YETTGPEIW D+ GKVD F              R+LKE+NP ++V GI
Sbjct:   67 IAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPASMSMERRVILKAFGAELVLTDPAKGMKGAVEKAEEILKKTPDSYMLQQFDNPANPKIHYETTGPEIWEDTKGKVDIFVAGIGTGGTISGVGRYLKERNPGVQVIGI 267          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3)

HSP 1 Score: 261.536 bits (667), Expect = 3.631e-69
Identity = 126/205 (61.46%), Postives = 157/205 (76.59%), Query Frame = 2
Query:  158 DKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            D   I  +V++LIG TPMVYLN++  GCVA IAAKLE+M+PC SVKDRI YSM+ DAE KG I+PGK+VL+E TSGNTGIGLAFIAASRGY+LI+ MP++ S+ERR++L+A GAE+ L DPA G  G V+K EEIL  TP+ Y+L QF+NPANP+I+YETTGPEIW+D+ GKVD F              RF+KEKNP  +V G+
Sbjct:  109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGV 313          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.024e-60
Identity = 114/201 (56.72%), Postives = 147/201 (73.13%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            I +DVT+LIG TPMVYLN V DGC+A IAAKLE M+PC SVKDRI  SMI +AE+ G ITP KTVL+E T+GNTG+G+AF+AA++GYKLI+ MP++ +IERR++LRALGAE+ L +P  G +G V K +EI+ +T N Y+  QF+N AN +I++ETTGPEIW D+ G VD F               FLK  N +IKV G+
Sbjct:   99 IAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKGLKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGGTVTGTGGFLKMMNKDIKVVGV 299          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 5.102e-47
Identity = 95/204 (46.57%), Postives = 132/204 (64.71%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNV--VDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            +I  ++TELIG TP+V LN +  ++GC A+I  KLE M P +SVKDRI  +MI  AE +GLI PGKT+LIE TSGNTGI LA +AA++GY+LI+ MP T S ERR +L+A GA++ L   + G  G +++ +E+    PN Y+L QF+NPANP+I+ +TT  EIW D+ G +D                  LKEK P+ +   +
Sbjct:    2 KIASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGLIEPGKTLLIEPTSGNTGIALAMVAAAKGYQLILTMPETMSQERRAMLKAYGAKLELTPGSEGMGGCIRRAQELAESLPNAYMLQQFDNPANPQIHQQTTALEIWQDTDGAIDFLVAGVGTGGTITGVASVLKEKKPSFQAIAV 205          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.096e-44
Identity = 93/194 (47.94%), Postives = 121/194 (62.37%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNP 751
            I +DVT+L+G+TP+V L  V +G +A + AKLE   P +SVKDRI  +MI  AE+ GLI P  TV++E TSGNTGI LA + A+RGY  ++ MP T SIERR++LRA GAE+ L   A G  G + K EE+       +I  QFENPANP I+  TT  E+W D+ GKVD F              R +KE+ P
Sbjct:    3 IAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIKPD-TVILEPTSGNTGIALAMVCAARGYHCVLTMPETMSIERRMLLRAYGAELILTPGADGMSGAIAKAEELAKSDKRYFIPQQFENPANPAIHAATTAEEVWRDTDGKVDIFVSGIGTGGTITGVARIIKERRP 195          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.536e-43
Identity = 90/201 (44.78%), Postives = 123/201 (61.19%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            I +D+T+LIG TP+V L  V DG VA I AKLE   P +SVKDRI  +M++ AE  GLI P  T+++E TSGNTGI LA + A+RGY+ ++ MP T S+ERR++LRA GAE+ L   A G  G + K EE+       ++  QFENPANP I+  TT  E+W D+ GKVD                + +KE+ P+ +   +
Sbjct:    3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAV 202          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.536e-43
Identity = 90/201 (44.78%), Postives = 123/201 (61.19%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            I +D+T+LIG TP+V L  V DG VA I AKLE   P +SVKDRI  +M++ AE  GLI P  T+++E TSGNTGI LA + A+RGY+ ++ MP T S+ERR++LRA GAE+ L   A G  G + K EE+       ++  QFENPANP I+  TT  E+W D+ GKVD                + +KE+ P+ +   +
Sbjct:    3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAV 202          
The following BLAST results are available for this feature:
BLAST of CK933035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK_MAIZE2.971e-7164.68Cysteine synthase OS=Zea mays PE=1 SV=2[more]
CYSK2_ORYSJ1.474e-7063.68Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSKP_ARATH4.290e-7062.69Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_SPIOL2.780e-6963.68Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKM_ARATH3.631e-6961.46Cysteine synthase, mitochondrial OS=Arabidopsis th... [more]
CYSK4_ARATH4.024e-6056.72Probable cysteine synthase, chloroplastic OS=Arabi... [more]
CYSK_SYNY35.102e-4746.57Cysteine synthase OS=Synechocystis sp. (strain PCC... [more]
CYSK_MYCLE3.096e-4447.94Cysteine synthase A OS=Mycobacterium leprae GN=cys... [more]
CYSK_MYCTU1.536e-4344.78Cysteine synthase A OS=Mycobacterium tuberculosis ... [more]
CYSK_MYCBO1.536e-4344.78Cysteine synthase A OS=Mycobacterium bovis GN=cysK... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_E03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933035 ID=CK933035; Name=CK933035; organism=Citrus sinensis; type=EST; length=780bp
GGGGGTGGATATGTATATATGTTTATCTTCAATGTCTGATGCATAATGTA
TTTCAGAGAAAAAATTACACCAGGAACTGGTATCTCCATTCAAACTGCCA
AGTGCTAGGCTGGCTGCTTGATTTTTTGAAAGTTTTTGGTGAAGTAGCTC
CATGGAGGACAAGTGTGAAATTAAGAAAGACGTTACGGAATTAATAGGCC
ATACACCGATGGTGTATCTCAATAATGTTGTGGATGGTTGTGTCGCCCGT
ATTGCTGCCAAGCTAGAAATGATGCAACCTTGCTCTAGCGTCAAAGACAG
AATTGCATATAGTATGATCAAAGATGCAGAGGATAAGGGCTTAATAACCC
CAGGGAAGACTGTCCTCATTGAGCTAACTAGTGGAAACACCGGCATTGGA
TTGGCCTTCATTGCAGCATCAAGGGGTTACAAACTTATCATTATAATGCC
ATCAACATACAGTATTGAGAGAAGAATAATTCTCAGAGCTTTGGGAGCTG
AGGTTTATCTTGCAGATCCAGCAGTGGGCTTTGAGGGGTTTGTTAAAAAG
GGTGAGGAGATACTAAACAGAACACCTAATGGTTATATTCTTGGACAATT
TGAAAATCCCGCGAATCCGGAGATTTATTACGAGACAACTGGCCCAGAGA
TATGGAACGACTCAGGAGGGAAGGTTGATGCTTTTATAGCAGGGATAGGA
ACTGGTGGTACTGTAACTGGTGCGGGGAGATTCCTTAAAGAAAAGAACCC
AAATATTAAGGTATATGGTATANNNNNATC
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