CK933035

Overview
NameCK933035
Unique NameCK933035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3163 contig Csv1_Contig3163:69..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_NEIMB (Cysteine synthase OS=Neisseria meningitidis serogroup B GN=cysK PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.470e-43
Identity = 92/203 (45.32%), Postives = 126/203 (62.07%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYIL-GQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            +I   +TELIG+TP+V LN + +G  A +A KLE   P SSVKDRIA +MI+ AE  G I    TV++E TSGNTG+GLA + A+RGYKL I MP + S ER+++LRA GAE+ L   A G  G + K + +++  P+ Y +  QF+N ANPE++ +TT  EIW D+ GKVD F                LK+  P +KV  +
Sbjct:    2 KIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVKDRIAEAMIEGAEKAGKINKN-TVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKERKMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTAEEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAV 203          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.897e-42
Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK 739
            +I +D +  IGHTP+V LN + +G   RI AK+E   P  SVK RI  +MI DAE +G++ PG   L+E TSGNTGI LA++AA+RGYKL + MP T SIERR +L+ALGA + L + A G +G ++K EEI+   P  Y +L QF NPANPEI+ +TTGPEIW D+ G+VD F              R++K
Sbjct:    3 KIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK 190          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.897e-42
Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK 739
            +I +D +  IGHTP+V LN + +G   RI AK+E   P  SVK RI  +MI DAE +G++ PG   L+E TSGNTGI LA++AA+RGYKL + MP T SIERR +L+ALGA + L + A G +G ++K EEI+   P  Y +L QF NPANPEI+ +TTGPEIW D+ G+VD F              R++K
Sbjct:    3 KIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK 190          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.897e-42
Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK 739
            +I +D +  IGHTP+V LN + +G   RI AK+E   P  SVK RI  +MI DAE +G++ PG   L+E TSGNTGI LA++AA+RGYKL + MP T SIERR +L+ALGA + L + A G +G ++K EEI+   P  Y +L QF NPANPEI+ +TTGPEIW D+ G+VD F              R++K
Sbjct:    3 KIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIK 190          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.897e-42
Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY-ILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK 739
            +I +D +  IGHTP+V LN + +G   RI AK+E   P  SVK RI  +MI DAE +G++ PG   L+E TSGNTGI LA++AA+RGYKL + MP T SIERR +L+ALGA + L + A G +G ++K EEI+   P  Y +L QF NPANPEI+ +TTGPEIW D+ G+VD F              R++K
Sbjct:    3 KIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIK 190          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_BACSU (Cysteine synthase OS=Bacillus subtilis GN=cysK PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.542e-40
Identity = 95/203 (46.80%), Postives = 128/203 (63.05%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYIL-GQFENPANPEIYYETTGPEIWNDSG-GKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            +   +TELIG+TP+V LN + D   A +  KLE M P SSVKDRI  +MI+ AE +G +  G T+ IE TSGNTGIGLA +AA++G K I++MP T S+ERR +LRA GAE+ L   A G +G +KK EE+  +  +GY +  QF NP+NPEI+ +TTG EI    G  ++DAF                LKE  P+IK+Y +
Sbjct:    4 VANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGKLKAGNTI-IEPTSGNTGIGLAMVAAAKGLKAILVMPDTMSMERRNLLRAYGAELVLTPGAEGMKGAIKKAEELAEK--HGYFVPQQFNNPSNPEIHRQTTGKEIVEQFGDDQLDAFVAGIGTGGTITGAGEVLKEAYPSIKIYAV 203          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.041e-40
Identity = 89/189 (47.09%), Postives = 118/189 (62.43%), Query Frame = 2
Query:  179 DVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYI-LGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKE 742
            D ++ IG TP+V LN +V G  A + AK+E   P  SVK RI  +MI DAE +GL+ PGK  LIE TSGNTGI LAF+AA+RG  L + MP T S+ERR +L A GA++ L +   G  G V++ E+I    P+ Y+ L QF NPANP I+ +TTGPEIW D+GG +D                R++K+
Sbjct:   10 DNSQTIGKTPLVRLNRIVKGAPATVLAKIEGRNPAYSVKCRIGAAMIWDAEQRGLLGPGKE-LIEPTSGNTGIALAFVAAARGIPLTLTMPETMSLERRKLLAAYGAKLVLTEGVKGMTGAVRRAEDIAASDPDRYVLLQQFRNPANPAIHEQTTGPEIWEDTGGAIDILVSGVGTGGTITGVSRYIKQ 197          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_STAES (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.998e-39
Identity = 93/199 (46.73%), Postives = 126/199 (63.32%), Query Frame = 2
Query:  182 VTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYI-LGQFENPANPEIYYETTGPEIWND-SGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            VT++IG+TP+V L NVVD   A I  KLE   P  SVKDRIA +MI+ AE +G I PG T+ +E TSGNTGIGLAF+ A++GYK +  MP T S ERR +L+A GAE+ L   +   +G +KK +E+  +  +GY    QFENPANPEI+  TTGPE+     G ++DAF              + LK++ PN+++  I
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKEL--KEEHGYFEPQQFENPANPEIHELTTGPELVEQFEGRQIDAFLAGVGTGGTLSGVGKVLKKEYPNVEIVAI 204          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_STAEQ (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.998e-39
Identity = 93/199 (46.73%), Postives = 126/199 (63.32%), Query Frame = 2
Query:  182 VTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYI-LGQFENPANPEIYYETTGPEIWND-SGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            VT++IG+TP+V L NVVD   A I  KLE   P  SVKDRIA +MI+ AE +G I PG T+ +E TSGNTGIGLAF+ A++GYK +  MP T S ERR +L+A GAE+ L   +   +G +KK +E+  +  +GY    QFENPANPEI+  TTGPE+     G ++DAF              + LK++ PN+++  I
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKEL--KEEHGYFEPQQFENPANPEIHELTTGPELVEQFEGRQIDAFLAGVGTGGTLSGVGKVLKKEYPNVEIVAI 204          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK_STAAW (Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.916e-39
Identity = 92/200 (46.00%), Postives = 126/200 (63.00%), Query Frame = 2
Query:  179 DVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYI-LGQFENPANPEIYYETTGPEIWNDSGGK-VDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            ++T++IG TP+V L NVVD   A +  KLE   P  SVKDRIA +MI+ AE +G I PG T+ +E TSGNTGIGLAF+ A++GYK +  MP T S ERR +L+A GAE+ L   +   +G +KK +E+  +  +GY    QFENPANPE++  TTGPE+     GK +DAF              + LK++ PNI++  I
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKEL--KEEHGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAI 204          
The following BLAST results are available for this feature:
BLAST of CK933035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK_NEIMB4.470e-4345.32Cysteine synthase OS=Neisseria meningitidis serogr... [more]
CYSK_SALTY2.897e-4249.48Cysteine synthase A OS=Salmonella typhimurium GN=c... [more]
CYSK_SALTI2.897e-4249.48Cysteine synthase A OS=Salmonella typhi GN=cysK PE... [more]
CYSK_ECOLI2.897e-4249.48Cysteine synthase A OS=Escherichia coli (strain K1... [more]
CYSK_ECO572.897e-4249.48Cysteine synthase A OS=Escherichia coli O157:H7 GN... [more]
CYSK_BACSU3.542e-4046.80Cysteine synthase OS=Bacillus subtilis GN=cysK PE=... [more]
SRPG_SYNE76.041e-4047.09Cysteine synthase, plasmid OS=Synechococcus elonga... [more]
CYSK_STAES2.998e-3946.73Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
CYSK_STAEQ2.998e-3946.73Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
CYSK_STAAW3.916e-3946.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_E03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933035 ID=CK933035; Name=CK933035; organism=Citrus sinensis; type=EST; length=780bp
GGGGGTGGATATGTATATATGTTTATCTTCAATGTCTGATGCATAATGTA
TTTCAGAGAAAAAATTACACCAGGAACTGGTATCTCCATTCAAACTGCCA
AGTGCTAGGCTGGCTGCTTGATTTTTTGAAAGTTTTTGGTGAAGTAGCTC
CATGGAGGACAAGTGTGAAATTAAGAAAGACGTTACGGAATTAATAGGCC
ATACACCGATGGTGTATCTCAATAATGTTGTGGATGGTTGTGTCGCCCGT
ATTGCTGCCAAGCTAGAAATGATGCAACCTTGCTCTAGCGTCAAAGACAG
AATTGCATATAGTATGATCAAAGATGCAGAGGATAAGGGCTTAATAACCC
CAGGGAAGACTGTCCTCATTGAGCTAACTAGTGGAAACACCGGCATTGGA
TTGGCCTTCATTGCAGCATCAAGGGGTTACAAACTTATCATTATAATGCC
ATCAACATACAGTATTGAGAGAAGAATAATTCTCAGAGCTTTGGGAGCTG
AGGTTTATCTTGCAGATCCAGCAGTGGGCTTTGAGGGGTTTGTTAAAAAG
GGTGAGGAGATACTAAACAGAACACCTAATGGTTATATTCTTGGACAATT
TGAAAATCCCGCGAATCCGGAGATTTATTACGAGACAACTGGCCCAGAGA
TATGGAACGACTCAGGAGGGAAGGTTGATGCTTTTATAGCAGGGATAGGA
ACTGGTGGTACTGTAACTGGTGCGGGGAGATTCCTTAAAGAAAAGAACCC
AAATATTAAGGTATATGGTATANNNNNATC
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