CK933035

Overview
NameCK933035
Unique NameCK933035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3163 contig Csv1_Contig3163:69..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CBS_MOUSE (Cystathionine beta-synthase OS=Mus musculus GN=Cbs PE=2 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 7.909e-32
Identity = 84/207 (40.58%), Postives = 110/207 (53.14%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNVVD--GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            +I  D+   IG+TPMV +N +    G    + AK E      SVKDRI+  MI+DAE  G + PG T+ IE TSGNTGIGLA  AA +GY+ II+MP   S+E+  +LRALGAE+        F   E  V     + N  PN +IL Q+ N +NP  +Y+ T  EI     GK+D                R LKEK P  K+ G+
Sbjct:   72 KILPDILRKIGNTPMVRINKISKNAGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGNLKPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDDTAEEILQQCDGKLDMLVASAGTGGTITGIARKLKEKCPGCKIIGV 277          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CBS_RABIT (Cystathionine beta-synthase OS=Oryctolagus cuniculus GN=CBS PE=2 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 1.349e-31
Identity = 83/207 (40.10%), Postives = 110/207 (53.14%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNVVD--GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            +I  D+ + IG TPMV +N +    G    + AK E      SVKDRI+  MI+DAE  G + PG T+ IE TSGNTGIGLA  AA +GY+ II+MP   S+E+  +LRALGAE+        F   E  V     +    PN +IL Q+ N +NP  +Y+TT  EI     GK+D                R LKEK P  ++ G+
Sbjct:   75 KILPDILQKIGDTPMVRINKIGKNFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLRPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSLEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKQEIPNSHILDQYRNASNPLAHYDTTAEEILQQCDGKLDMLVASAGTGGTITGIARKLKEKCPGCQIIGV 280          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK1_SCHPO (Cysteine synthase 1 OS=Schizosaccharomyces pombe GN=cys11 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.491e-30
Identity = 79/188 (42.02%), Postives = 106/188 (56.38%), Query Frame = 2
Query:  194 IGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFE---GFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKN 748
            IG TP++ LN + +     I AK E   P  SVKDR AY +++DAE KG ++ G T+ +E T+GNTGIGLA IA +RGYK +I MP+T S  +   L+ LGAEV+   P   F     +  +       TPN     QF+N AN   +YETTGPEIW+ + G VD F              ++LKEK+
Sbjct:   21 IGRTPLIRLNTLSNETGCNILAKAEFQNPGGSVKDRAAYYVVRDAEKKGKLSRGGTI-VEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTLKFLGAEVHPV-PVAPFSNPLNYNHQARRHAESTPNASWTDQFDNVANLLSHYETTGPEIWDQTKGTVDGFTCSTGTGGTFAGVTKYLKEKS 206          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CBS_DICDI (Cystathionine beta-synthase OS=Dictyostelium discoideum GN=cysB PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.491e-30
Identity = 79/204 (38.73%), Postives = 109/204 (53.43%), Query Frame = 2
Query:  170 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            I  ++ + IG TP+V +N V       + AK E      SVKDRI + MI DAE+ G I  G T LIE TSGNTGIGLA  AA +GYK+II +P   S E+  +L+ALGAE+        F   E  +   +++ +  PN +IL Q+ NP+NP  +Y+ T  E+     GK+D                R +KE+ PN  V G+
Sbjct:   32 IMDNILDNIGGTPLVRVNKVSSDLECELVAKCEFFNAGGSVKDRIGHRMIVDAEESGRIKKGDT-LIEPTSGNTGIGLALTAAIKGYKMIITLPEKMSQEKVDVLKALGAEIIRTPTEAAFDAPESHIGVAKKLNSEIPNSHILDQYGNPSNPLAHYDGTAEELLEQCEGKIDMIVCTAGTGGTITGIARKIKERLPNCIVVGV 234          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSM_CAMJE (Cysteine synthase B OS=Campylobacter jejuni GN=cysM PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.340e-30
Identity = 75/202 (37.13%), Postives = 108/202 (53.47%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            ++ + V+ELIG+TP+++L          + AK E + P  S+KDR A+ MIKDA D   I    T+ +E TSGNTGI LA I A  G K I +MP + S+ERR ++   GA + L    +G +G V K  EIL  TPN +++ QFEN +N   + + T  EI  D   ++D F                LKEK   + + G+
Sbjct:    2 KVHEKVSELIGNTPIIHLKKFG----INVFAKCEFLNPSHSIKDRAAFEMIKDALDSKKINQDTTI-VEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMITLFGARLELTPANLGMKGAVDKANEILLNTPNSFMVSQFENISNKNAHRKNTALEILRDLDNELDIFVAGFGTGGTISGVGEILKEKLEKVHIVGV 198          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSM_PSESY (Cysteine synthase B (Fragment) OS=Pseudomonas syringae pv. syringae GN=cysM PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.266e-29
Identity = 73/163 (44.79%), Postives = 94/163 (57.67%), Query Frame = 2
Query:  182 VTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGG 670
            + + +G+TP+V L  +       +  KLE   P  SVKDR A SMI  AE +G I PG T LIE TSGNTGI LA  AA +GY++I+IMP   S ER+  + A GAE+       G EG  +   E +     G +L QF N  NPE +Y +TGPEIW  +GG
Sbjct:    8 IADCVGNTPLVRLQRMAGNTSNTLLLKLEGNNPAGSVKDRPALSMITRAELRGQIHPGDT-LIEATSGNTGIALAMAAAIKGYRMILIMPDNSSAERKAAMTAYGAELISVSKDDGMEG-ARDLAERMQAEGRGKVLDQFANGDNPEAHYTSTGPEIWRQTGG 168          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CBS_YEAST (Cystathionine beta-synthase OS=Saccharomyces cerevisiae GN=CYS4 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.381e-28
Identity = 77/215 (35.81%), Postives = 116/215 (53.95%), Query Frame = 2
Query:  155 EDKCEIKKDVTELIGHTPMVYLNNVVD--GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWN-----DSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYG 769
            E + + + +V +L+G+TP++ L  +    G   +I AKLE+  P  S+KDRIA SM+++AE  G I P ++ LIE TSGNTGIGLA I A +GY+ II +P   S E+  +L+ALGAE+     A  +   E  +   +++    P   IL Q+ N  NPE +Y  TG EI       +    + A               ++LKE+N  I++ G
Sbjct:    5 EQQADSRHNVIDLVGNTPLIALKKLPKALGIKPQIYAKLELYNPGGSIKDRIAKSMVEEAEASGRIHPSRSTLIEPTSGNTGIGLALIGAIKGYRTIITLPEKMSNEKVSVLKALGAEIIRTPTAAAWDSPESHIGVAKKLEKEIPGAVILDQYNNMMNPEAHYFGTGREIQRQLEDLNLFDNLRAVVAGAGTGGTISGISKYLKEQNDKIQIVG 219          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSM_HELPY (Cysteine synthase OS=Helicobacter pylori GN=cysM PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.049e-28
Identity = 75/198 (37.88%), Postives = 106/198 (53.54%), Query Frame = 2
Query:  188 ELIGHTPMVYLNNVVDGCV---ARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            + IG TP+    N  D  +   + I AKLE + P  SVKDR+   +I +    G IT  KT +IE T+GNTGI LA +A     K I ++P  +S E++ I+RALGA V     + G  G +KK +E+    P+ Y+  QFENP NP  YY T  PEI  + G  + +F              R+LKE+ P I++ G+
Sbjct:    9 DAIGRTPVFKFTNK-DYPIPLNSAIYAKLEHLNPGGSVKDRLGQYLIGEGFKTGKIT-SKTTIIEPTAGNTGIALALVAIKHHLKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGTARYLKERIPAIRLIGV 204          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSM_HELPJ (Cysteine synthase OS=Helicobacter pylori J99 GN=cysM PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.182e-27
Identity = 69/174 (39.66%), Postives = 97/174 (55.75%), Query Frame = 2
Query:  251 IAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGI 772
            I AKLE + P  SVKDR+   +IK+A     IT   T +IE T+GNTGI LA +A     K I ++P  +S E++ I+RALGA V     + G  G +KK +E+    P+ Y+  QFENP NP  YY T  PEI  + G  + +F              ++LKE+ PNI++ G+
Sbjct:   31 IYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKIT-STTTIIEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGMAKYLKERIPNIRLIGV 203          
BLAST of CK933035 vs. ExPASy Swiss-Prot
Match: CYSK2_SCHPO (Cysteine synthase 2 OS=Schizosaccharomyces pombe GN=cys12 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.633e-27
Identity = 80/209 (38.28%), Postives = 108/209 (51.67%), Query Frame = 2
Query:  167 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKT-VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA--VGFEGFVKKGEE-ILNRTPN------GYILGQFENPANPEIYYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKV 763
            +I   V  LIG+T MV + ++       I AK E + P +S KDR+A  MI+ AE+ G + P ++  + E T+G+TGI +A +  S GY   I MPS  S E+  IL  LGA V    PA  V    FV        N T +      GY   QFENPAN + ++ +TGPEIW    GK+DAF              R+LK K+P+I V
Sbjct:   41 DIVNGVEGLIGNTKMVRIKSLSQATGCDILAKAEFLNPGNSPKDRVALQMIRTAEENGDLVPYQSNAVYEGTAGSTGISIAMLCCSLGYDSRIYMPSDQSKEKSDILELLGAHVQRVTPAPIVDPNHFVNTARRNAANHTVDESIPGKGYFANQFENPANWQAHFNSTGPEIWRQCAGKLDAFIAGSGTGGTIAGISRYLKSKDPSITV 249          
The following BLAST results are available for this feature:
BLAST of CK933035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CBS_MOUSE7.909e-3240.58Cystathionine beta-synthase OS=Mus musculus GN=Cbs... [more]
CBS_RABIT1.349e-3140.10Cystathionine beta-synthase OS=Oryctolagus cunicul... [more]
CYSK1_SCHPO1.491e-3042.02Cysteine synthase 1 OS=Schizosaccharomyces pombe G... [more]
CBS_DICDI1.491e-3038.73Cystathionine beta-synthase OS=Dictyostelium disco... [more]
CYSM_CAMJE4.340e-3037.13Cysteine synthase B OS=Campylobacter jejuni GN=cys... [more]
CYSM_PSESY6.266e-2944.79Cysteine synthase B (Fragment) OS=Pseudomonas syri... [more]
CBS_YEAST2.381e-2835.81Cystathionine beta-synthase OS=Saccharomyces cerev... [more]
CYSM_HELPY9.049e-2837.88Cysteine synthase OS=Helicobacter pylori GN=cysM P... [more]
CYSM_HELPJ1.182e-2739.66Cysteine synthase OS=Helicobacter pylori J99 GN=cy... [more]
CYSK2_SCHPO2.633e-2738.28Cysteine synthase 2 OS=Schizosaccharomyces pombe G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_E03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933035 ID=CK933035; Name=CK933035; organism=Citrus sinensis; type=EST; length=780bp
GGGGGTGGATATGTATATATGTTTATCTTCAATGTCTGATGCATAATGTA
TTTCAGAGAAAAAATTACACCAGGAACTGGTATCTCCATTCAAACTGCCA
AGTGCTAGGCTGGCTGCTTGATTTTTTGAAAGTTTTTGGTGAAGTAGCTC
CATGGAGGACAAGTGTGAAATTAAGAAAGACGTTACGGAATTAATAGGCC
ATACACCGATGGTGTATCTCAATAATGTTGTGGATGGTTGTGTCGCCCGT
ATTGCTGCCAAGCTAGAAATGATGCAACCTTGCTCTAGCGTCAAAGACAG
AATTGCATATAGTATGATCAAAGATGCAGAGGATAAGGGCTTAATAACCC
CAGGGAAGACTGTCCTCATTGAGCTAACTAGTGGAAACACCGGCATTGGA
TTGGCCTTCATTGCAGCATCAAGGGGTTACAAACTTATCATTATAATGCC
ATCAACATACAGTATTGAGAGAAGAATAATTCTCAGAGCTTTGGGAGCTG
AGGTTTATCTTGCAGATCCAGCAGTGGGCTTTGAGGGGTTTGTTAAAAAG
GGTGAGGAGATACTAAACAGAACACCTAATGGTTATATTCTTGGACAATT
TGAAAATCCCGCGAATCCGGAGATTTATTACGAGACAACTGGCCCAGAGA
TATGGAACGACTCAGGAGGGAAGGTTGATGCTTTTATAGCAGGGATAGGA
ACTGGTGGTACTGTAACTGGTGCGGGGAGATTCCTTAAAGAAAAGAACCC
AAATATTAAGGTATATGGTATANNNNNATC
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