CK933087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933087 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.383e-35 Identity = 71/179 (39.66%), Postives = 108/179 (60.34%), Query Frame = 1 Query: 223 LSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQG---PTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNR--EQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCN 744 L LD+ +GSGF S Y G +KL +AG V A+Y S+ HDE+D EFLGN+ G+P+ TN++ G NR E+++ LWFDP++ FH YS++W P +IF VD++PIR E + +P+ +PM +Y+++W+A WAT GG D+T +PF + +++ CN Sbjct: 64 LLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQ-KPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCN 241
BLAST of CK933087 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.589e-30 Identity = 64/158 (40.51%), Postives = 104/158 (65.82%), Query Frame = 1 Query: 172 TWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWN 645 TWG + A + N L L+LD+ SGSGF+S+ Y G ++++K S G +T++YL S+ HDE+ F+ LG +G PY+L+TN++ G+G ++Q+F LWFDPT+++H+YS +W P ++F VD+ PIRV+ +++ V +P Q M + S+ N Sbjct: 31 TWGHQ-ALVINKTSELQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRSSRHDELCFQILGK-NGPPYLLNTNMYLYGEGGKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVY--SKNPDVYYPSVQTMFLMGSVQN 184
BLAST of CK933087 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12 Identity = 51/176 (28.98%), Postives = 86/176 (48.86%), Query Frame = 1 Query: 163 FDLTWGDKRAKIFNGGQL----LSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTH----DEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWN---ADDW 657 F+ TW N G+L S + ++ + ++S Y +G ++ +K + G V++++ + GP H DEID EFLG + + + N + G G E+ L FD ++ FHTY+ W+P ++ + VD V K+ + +P + P KI +LWN DDW Sbjct: 53 FNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMK--PAKNTGIVSSFFTYT-GPAHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDG----VLKHTATANIP---STPGKIMMNLWNGTGVDDW 215
BLAST of CK933087 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 54/179 (30.17%), Postives = 88/179 (49.16%), Query Frame = 1 Query: 157 QDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGF-----QSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTH----DEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWN---ADDW 657 Q F+ TW N G+L LSL + + F +S +Y +G ++ +K + G V++++ + GP+H DEID EFLG + + + N + G G E+ L FD + +FHTY+ W+P ++ + VD V K+ + +P + P KI +LWN D W Sbjct: 52 QMFNCTWRANNVNFTNDGKL-KLSLTSPANNKFDCGEYRSTNNYGYGLYEVSMK--PAKNTGIVSSFFTYT-GPSHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKIINLGFDASTSFHTYAFDWQPGYIKWYVDG----VLKHTATTNIP---STPGKIMMNLWNGTGVDSW 216
BLAST of CK933087 vs. ExPASy Swiss-Prot
Match: CRR1_YEAST (Probable glycosidase CRR1 OS=Saccharomyces cerevisiae GN=CRR1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.255e-12 Identity = 62/220 (28.18%), Postives = 98/220 (44.55%), Query Frame = 1 Query: 157 QDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGN--REQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPK-----NQPMKIYSSLW---------NADDWATRGGLVKTDWTKAP-------FTAYYRNFRAIPCNN 747 +DFD T + + G ++ + +GS S R +L+G+ +++K S G VTA+ L+S DEIDFE+LG G +N ++QG + R Q+F + D +HTY + W P +I+ VD R ++ P K PM++ ++W +WA GGL+ DW +P FTA+ P N Sbjct: 149 EDFDFTHSGYTSIEASSGNIVLAMPKKTTGSLITSTRSFLYGKASVRMKTAR--SRGVVTAFDLTSA--IGDEIDFEWLG---GDLMTAQSNYYSQGHLDYTRMQRFPVGADTWATYHTYEIDWDPDRIIWYVDGKIARTVLKKDTWD-PISKEYRYPQTPMRLEIAVWPGGSETNGPGTINWA--GGLI--DWENSPDIIEKGQFTAHVEQITVTPYQN 356
BLAST of CK933087 vs. ExPASy Swiss-Prot
Match: XYND_RUMFL (Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.997e-11 Identity = 59/204 (28.92%), Postives = 93/204 (45.59%), Query Frame = 1 Query: 175 WGDKRAKIFNGGQLLSLSLD-------------RVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHD----EIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKA-----PFTAYYR 720 W KR + N G L LS+D R SG F++ Y +G + ++ + D G V++++ + GP+ D EID E LG + Q + N + G+G E+ + L FD + +HTY W+P ++ + VD V++ + + PK P KI + W GL DW KA P TA+Y+ Sbjct: 601 WWYKRNAVINDG-CLQLSIDQKWTNDKNPDWDPRYSGGEFRTNNFYHYGYYECSMQAMKND--GVVSSFFTYT-GPSDDNPWDEIDIEILGKNTTQ---VQFNYYTNGQGKHEKLYDLGFDSSEAYHTYGFDWQPNYIAWYVDG--REVYRATQDI----PKT-PGKIMMNAW--------PGLTVDDWLKAFNGRTPLTAHYQ 782
BLAST of CK933087 vs. ExPASy Swiss-Prot
Match: GUB_ORPSP (Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 52/176 (29.55%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 163 FDLTWGDKRAKIFNGGQLLSLSLDRVSGSGF-----QSKRDYLFGRIDMQLKLVAGDSAGTVTAYYL---SSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWN---ADDW 657 F+ W K NG L L++DR GSG+ ++K Y +G + +K + + G V++++ S G DEID EFLG + + + N + G+G+ E YL FD ++ FHTY W + + VD + + +P + P KI + WN DDW Sbjct: 61 FNCRWTPNNDKFENGK--LKLTIDR-DGSGYTCGEYRTKNYYGYGMFQVNMKPIK--NPGVVSSFFTYTGPSDGTKWDEIDIEFLGYDTTK---VQFNYYTNGQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDGTAVYTAYD----NIP---DTPGKIMMNAWNGIGVDDW 221 The following BLAST results are available for this feature:
BLAST of CK933087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933087 ID=CK933087; Name=CK933087; organism=Citrus sinensis; type=EST; length=772bpback to top |