CK933090
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_MOUSE (60S ribosomal protein L11 OS=Mus musculus GN=Rpl11 PE=1 SV=4) HSP 1 Score: 236.113 bits (601), Expect = 1.781e-61 Identity = 116/166 (69.88%), Postives = 135/166 (81.33%), Query Frame = 2 Query: 104 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 601 NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_HUMAN (60S ribosomal protein L11 OS=Homo sapiens GN=RPL11 PE=1 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 1.781e-61 Identity = 116/166 (69.88%), Postives = 135/166 (81.33%), Query Frame = 2 Query: 104 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 601 NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_CHILA (60S ribosomal protein L11 OS=Chinchilla lanigera GN=RPL11 PE=2 SV=3) HSP 1 Score: 236.113 bits (601), Expect = 1.781e-61 Identity = 116/166 (69.88%), Postives = 135/166 (81.33%), Query Frame = 2 Query: 104 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 601 NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_BOVIN (60S ribosomal protein L11 OS=Bos taurus GN=RPL11 PE=2 SV=3) HSP 1 Score: 236.113 bits (601), Expect = 1.781e-61 Identity = 116/166 (69.88%), Postives = 135/166 (81.33%), Query Frame = 2 Query: 104 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 601 NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_PIG (60S ribosomal protein L11 OS=Sus scrofa GN=RPL11 PE=2 SV=3) HSP 1 Score: 234.187 bits (596), Expect = 6.769e-61 Identity = 115/166 (69.28%), Postives = 135/166 (81.33%), Query Frame = 2 Query: 104 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 601 NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL +HR++KE+AM+WFQ K++G+IL Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKHDGIIL 175
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_ICTPU (60S ribosomal protein L11 OS=Ictalurus punctatus GN=rpl11 PE=2 SV=3) HSP 1 Score: 234.187 bits (596), Expect = 6.769e-61 Identity = 116/170 (68.24%), Postives = 135/170 (79.41%), Query Frame = 2 Query: 92 KKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 601 +K NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSD+G FGFGIQEHIDLGIKYDPS GIYG+DF+VVL +HR+ K +AM+WFQ KY+GVIL Sbjct: 6 EKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDSGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRKRGRIGFKHRIRKREAMRWFQQKYDGVIL 175
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_CHLRE (60S ribosomal protein L11 OS=Chlamydomonas reinhardtii GN=RPL11 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.730e-60 Identity = 110/167 (65.87%), Postives = 136/167 (81.44%), Query Frame = 2 Query: 110 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKS 610 MREI++ KLVLNI+V ESGDRL +AAKVLEQL+ Q PV+ +AR+TVRSF IRRNEKI+CYVTVRG+KA L++ GL VKE+EL+R+NFSDTG FGFGIQEHIDLG+KYDPSTGIYGMDF+V LE ++H+VTKEDA+KWFQ +++GV+LNK+ Sbjct: 1 MREIRISKLVLNIAVAESGDRLQKAAKVLEQLTSQVPVYGRARFTVRSFAIRRNEKISCYVTVRGEKAYDLVKRGLAVKEFELIRKNFSDTGNFGFGIQEHIDLGLKYDPSTGIYGMDFYVCLERRGYRVARRRKQKAHVGVKHKVTKEDAIKWFQQEFDGVVLNKA 167
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_NEUCR (60S ribosomal protein L11 OS=Neurospora crassa GN=rpl-11 PE=3 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 9.774e-60 Identity = 110/173 (63.58%), Postives = 136/173 (78.61%), Query Frame = 2 Query: 80 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVI 598 M++E+K NPMRE+++QKLVLNI VGESGDRLTRAAKVLEQLSGQTPV+SKARYTVR+FGIRRNEKI+ +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDP GIYGMDF+ + HR+T++D +KWF+ +++ ++ Sbjct: 1 MSTEQKAQNPMRELRIQKLVLNICVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKISVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPGIGIYGMDFYCCMTRPGERVSRRRRAKSRVGATHRITRDDTVKWFKSRFDAIV 173
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_ASHGO (60S ribosomal protein L11 OS=Ashbya gossypii GN=RPL11 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.411e-58 Identity = 111/171 (64.91%), Postives = 134/171 (78.36%), Query Frame = 2 Query: 95 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 607 K NPMRE+K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNEKIA +VT+RG K+ ++LE GLKVKEY+L +NFS+TG FGFGIQEHIDLGIKYDPS GIYGMDF+VV+ H+ +KED + WF+ +Y+ +L+K Sbjct: 4 KAQNPMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVHSKARYTVRTFGIRRNEKIAVHVTIRGPKSEEILERGLKVKEYQLRTKNFSETGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMGRPGGRVSRRKRCRSTVGNSHKTSKEDTIAWFKQRYDADVLDK 174
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11B_YEAST (60S ribosomal protein L11-B OS=Saccharomyces cerevisiae GN=RPL11B PE=1 SV=3) HSP 1 Score: 225.713 bits (574), Expect = 2.407e-58 Identity = 113/171 (66.08%), Postives = 132/171 (77.19%), Query Frame = 2 Query: 95 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 607 K NPMR++K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNEKIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGI EHIDLGIKYDPS GI+GMDF+VV+ H+ TKED + WF+ KY+ +L+K Sbjct: 4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174 The following BLAST results are available for this feature:
BLAST of CK933090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933090 ID=CK933090; Name=CK933090; organism=Citrus sinensis; type=EST; length=819bpback to top |