CK933098
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933098 vs. ExPASy Swiss-Prot
Match: TCP6_ARATH (Transcription factor TCP6 OS=Arabidopsis thaliana GN=TCP6 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.392e-19 Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 2 Query: 242 KDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSII 397 KDRH KV GRGRRVR+PPLCAARI+QLT+ELGH+SDGET+EWLL+ AEPSI+ Sbjct: 69 KDRHLKVEGRGRRVRLPPLCAARIYQLTKELGHKSDGETLEWLLQHAEPSIL 120
BLAST of CK933098 vs. ExPASy Swiss-Prot
Match: PCF1_ORYSJ (Transcription factor PCF1 OS=Oryza sativa subsp. japonica GN=PCF1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.124e-19 Identity = 52/87 (59.77%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 137 PKSQPQLSNTYNY*VSSQN*TRHPRKRXXXXXXXTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSII 397 P P LS SS T PR+ + DRH+KV GRGRRVR+P + AAR+FQLTRELGHR+DGETIEWLLRQAEPSII Sbjct: 24 PNPNPDLSIAAAEPPSSDGAT--PRRVRPRKSPSSSDRHSKVAGRGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLRQAEPSII 108
BLAST of CK933098 vs. ExPASy Swiss-Prot
Match: TCP23_ARATH (Transcription factor TCP23 OS=Arabidopsis thaliana GN=TCP23 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.330e-19 Identity = 42/53 (79.25%), Postives = 50/53 (94.34%), Query Frame = 2 Query: 239 TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSII 397 +KDRH KV+GRGRR+RMP +CAAR+FQLTREL H+SDGETIEWLL+QAEP+II Sbjct: 55 SKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAII 107
BLAST of CK933098 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.961e-19 Identity = 42/52 (80.77%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 242 KDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSII 397 +DRHTKV GRGRR+RMP CAARIFQLTRELGH+SDGETI WLL+Q+EP+II Sbjct: 76 RDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAII 127
BLAST of CK933098 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.961e-19 Identity = 42/52 (80.77%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 242 KDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSII 397 +DRHTKV GRGRR+RMP CAARIFQLTRELGH+SDGETI WLL+Q+EP+II Sbjct: 76 RDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAII 127
BLAST of CK933098 vs. ExPASy Swiss-Prot
Match: TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.187e-18 Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 2 Query: 239 TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSII 397 +KDRHTKV GRGRR+RMP CAAR+FQLTRELGH+SDGETI WLL +AEP+II Sbjct: 57 SKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAII 109
BLAST of CK933098 vs. ExPASy Swiss-Prot
Match: TCP16_ARATH (Transcription factor TCP16 OS=Arabidopsis thaliana GN=TCP16 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12 Identity = 30/51 (58.82%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 242 KDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSI 394 KDRH K+ GR RR+R+PP A ++F+LT+ELG ++DGET+ WLL+ AEP+I Sbjct: 18 KDRHLKIGGRDRRIRIPPSVAPQLFRLTKELGFKTDGETVSWLLQNAEPAI 68 The following BLAST results are available for this feature:
BLAST of CK933098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933098 ID=CK933098; Name=CK933098; organism=Citrus sinensis; type=EST; length=734bpback to top |