CK933117

Overview
NameCK933117
Unique NameCK933117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.595e-31
Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 1
Query:  118 EKMGLKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 429
            ++ G +KGPWT +ED +L+N+V L+G   W  + K +GL R GKSCRLRW+NYL P +KRG  T +EE  ++ LH   GNRWS IA +LPGRTDNEIKN W TH
Sbjct:    3 QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTH 106          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.595e-31
Identity = 60/99 (60.61%), Postives = 74/99 (74.75%), Query Frame = 1
Query:  133 KKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 429
            +KG W+PEED+ L +++  YGH  W  +P +AGL R GKSCRLRWINYLRP +KR   + EEE+TI+  H  LGN+WS IA  LPGRTDNEIKN WH+H
Sbjct:   11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSH 109          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.062e-31
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 1
Query:  133 KKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 429
            +KGPWT +ED +L+N+V L+G   W  + K +GL R GKSCRLRW+NYL P +KRG  T +EE  ++ LH   GNRWS IA +LPGRTDNEIKN W TH
Sbjct:    9 RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTH 107          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.950e-29
Identity = 58/100 (58.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 429
            ++KGPWT +ED  L+  V+L+G   W  + K +GL R GKSCRLRW+NYL P +KRG  +  EE  I+ LH   GNRWS IA RLPGRTDNEIKN W TH
Sbjct:    8 IRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTH 107          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.344e-29
Identity = 58/100 (58.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 429
            ++KGPWT +ED  L+  V+L+G   W  + K +GL R GKSCRLRW+NYL P +K G  + +EE  II LH   GNRWS IA RLPGRTDNEIKN W TH
Sbjct:    8 MRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTH 107          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 7.668e-26
Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 1
Query:  121 KMGLKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWH 423
            K    K  W PEED+IL +YV  YG   W  +PK+ GL     SCR RW+N+L+P +K+G FT EEE  ++ LH +LGN+WS +A   PGRTDNEIKN W+
Sbjct:   13 KKTFTKSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWN 113          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.076e-23
Identity = 50/99 (50.51%), Postives = 67/99 (67.68%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EED+ +I  VK YG  +W  + KQ    R GK CR RW N+L P++K+ ++T EE+  I   H++LGNRW+ IA  LPGRTDN +KN W++
Sbjct:   81 LVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRG-RMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNS 178          

HSP 2 Score: 77.411 bits (189), Expect = 1.148e-13
Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = 1
Query:  136 KGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNR-WSAIAARLPGRTDNEIKNVWHTH 429
            K  WTPEED+ L   VK +G G W+ +       R  + C+ RW+  L PD+ +G +T+EE++ +I L +  G + W+ IA +L GR   + +  WH H
Sbjct:   31 KVKWTPEEDETLKALVKKHGQGEWKTIASNLNN-RTEQQCQHRWLRVLHPDLVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQCRERWHNH 128          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYBB_CHICK (Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.036e-22
Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  VK YG   W  + K     R GK CR RW N+L P++K+ ++T EE+  I   H++LGNRW+ IA  LPGRTDN +KN W++
Sbjct:   81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWNS 178          

HSP 2 Score: 72.0182 bits (175), Expect = 4.825e-12
Identity = 36/105 (34.29%), Postives = 56/105 (53.33%), Query Frame = 1
Query:  118 EKMGLKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNR-WSAIAARLPGRTDNEIKNVWHTH 429
            ++ G  K  WT EED+ L   V+ YG  +W+ L       R  + C+ RW+  L PD+ +G +T+EE+  +I L +  G + W+ IA  L GR   + +  WH H
Sbjct:   25 QRDGRCKVKWTQEEDEQLKMLVRHYGQNDWKFLASHFPN-RSDQQCQYRWLRVLNPDLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNH 128          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.768e-22
Identity = 51/99 (51.52%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  V  YG   W  + K     R GK CR RW N+L P++K+ ++T EE+ TI   H+ LGNRW+ IA  LPGRTDN IKN W++
Sbjct:   87 LIKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNS 184          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYBB_MOUSE (Myb-related protein B OS=Mus musculus GN=Mybl2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.015e-22
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  VK YG   W  + K     R GK CR RW N+L P++K+  +T EE+  I   H++LGNRW+ IA  LPGRTDN +KN W++
Sbjct:   81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNS 178          

HSP 2 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 1
Query:  136 KGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNR-WSAIAARLPGRTDNEIKNVWHTH 429
            K  WT EED+ L   V+ +G  +W+ L       R  + C+ RW+  L PD+ +G +T+EE+  +I L +  G + W+ IA  L GR   + +  WH H
Sbjct:   31 KVKWTHEEDEQLRALVRQFGQQDWKFLASHFPN-RTDQQCQYRWLRVLNPDLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNH 128          
The following BLAST results are available for this feature:
BLAST of CK933117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MYB48_ARATH1.595e-3156.73Transcription factor MYB48 OS=Arabidopsis thaliana... [more]
LAF1_ARATH1.595e-3160.61Transcription factor LAF1 OS=Arabidopsis thaliana ... [more]
MYB59_ARATH6.062e-3158.59Transcription factor MYB59 OS=Arabidopsis thaliana... [more]
MYBA2_ORYSJ1.950e-2958.00Myb-related protein MYBAS2 OS=Oryza sativa subsp. ... [more]
MYBA1_ORYSJ4.344e-2958.00Myb-related protein MYBAS1 OS=Oryza sativa subsp. ... [more]
MY104_ARATH7.668e-2651.49Transcription factor MYB104 OS=Arabidopsis thalian... [more]
MYBB_XENLA6.076e-2350.51Myb-related protein B OS=Xenopus laevis GN=mybl2 P... [more]
MYBB_CHICK1.036e-2250.51Myb-related protein B OS=Gallus gallus GN=MYBL2 PE... [more]
MYB_XENLA1.768e-2251.52Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1[more]
MYBB_MOUSE3.015e-2250.51Myb-related protein B OS=Mus musculus GN=Mybl2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_E09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933117 ID=CK933117; Name=CK933117; organism=Citrus sinensis; type=EST; length=863bp
GGGTCACATTGTATTCGTGCTTTGAGATCAAACAATTTGATCAGAGAGAA
TTAAAAAGATACATAGCAAAGTTAAATATACTGCGGTGGTCCAAAAATGG
TGAGAGCTCCATGCTGCGAGAAGATGGGATTGAAGAAAGGTCCATGGACT
CCTGAAGAAGATCAAATTTTAATCAATTACGTTAAACTTTATGGCCATGG
CAACTGGCGGGCACTTCCCAAACAAGCAGGTTTATTAAGATGTGGAAAGA
GTTGCCGGCTCCGGTGGATAAATTACTTGCGGCCGGATATTAAACGGGGA
AATTTCACCAGAGAAGAAGAGGACACTATCATCAACCTACATGAAATGCT
CGGAAATAGATGGTCAGCAATCGCAGCAAGACTACCGGGAAGAACGGACA
ACGAAATTAAAAATGTTTGGCACACCCACTTGAAAAAGCGTCTCAAGCAA
AAGCAACAACAAGAGCCCGTGATTAATAATCATAGTAACGCTAATCATGT
TACGGCGAGATCCGAGATCTGCAGCGGCGCCAGTACTCCCGATCGGCAGA
CTCGACTACTACTTCAAGCGACATGTCGTCCGTCACCTCCTCCGCGGCTA
ATAACGCTTGCGTGAAAACAGAGCCGTCGTCGTCCGAAAACAATCACGAC
AGCTTGGTTGAAATAGATGAGAATTTTTGGACGGAAGTGTTGTCGGCTGA
GAACTCGGGCATTAGTATTGAGGACAGCAATGATCGTTTTTCAGCGGTTG
GAAGCGCCGACCCACTGTCTATAGTTGAATTTCAATCATCACTCGATGAT
TTTAGACCAGGTTCTACTTTGTGTGATAACACCGACTTTTGGTTCAATCT
TTTCACCAAAGCT
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