CK933117

Overview
NameCK933117
Unique NameCK933117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYBB_HUMAN (Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.015e-22
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  VK YG   W  + K     R GK CR RW N+L P++K+  +T EE+  I   H++LGNRW+ IA  LPGRTDN +KN W++
Sbjct:   81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNS 178          

HSP 2 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 1
Query:  136 KGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNR-WSAIAARLPGRTDNEIKNVWHTH 429
            K  WT EED+ L   V+ +G  +W+ L       R  + C+ RW+  L PD+ +G +T+EE+  +I L +  G + W+ IA  L GR   + +  WH H
Sbjct:   31 KVKWTHEEDEQLRALVRQFGQQDWKFLASHFPN-RTDQQCQYRWLRVLNPDLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNH 128          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYBA_XENLA (Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.015e-22
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  V  YG   W  + K     R GK CR RW N+L PD+K+ ++T EE+  I + H+ +GNRW+ IA  LPGRTDN IKN W++
Sbjct:   84 LVKGPWTKEEDQRVIELVHKYGPKKWSIIAKHLKG-RIGKQCRERWHNHLNPDVKKSSWTEEEDRIIYSAHKRMGNRWAEIAKLLPGRTDNSIKNHWNS 181          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.938e-22
Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I +V+ YG   W  + K     R GK CR RW N+L P++K+ ++T EE+  I   H+ LGNRW+ IA  LPGRTDN +KN W++
Sbjct:   19 LNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNS 116          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.143e-22
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  V+ YG   W  + K     R GK CR RW N+L P++K+ ++T EE+  I   H+ LGNRW+ IA  LPGRTDN IKN W++
Sbjct:   85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNS 182          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.143e-22
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  V+ YG   W  + K     R GK CR RW N+L P++K+ ++T EE+  I   H+ LGNRW+ IA  LPGRTDN IKN W++
Sbjct:   85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNS 182          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYB98_ARATH (Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.717e-22
Identity = 50/102 (49.02%), Postives = 67/102 (65.69%), Query Frame = 1
Query:  118 EKMGLKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWH 423
            +K  L KG WT EED++LI  V+ YG   W  +  Q    R GK CR RW N+LRPDIK+  ++ EE+  +I  H+ +GN+W+ IA RLPGRT+N IKN W+
Sbjct:  211 KKSTLVKGQWTAEEDRVLIQLVEKYGLRKWSHIA-QVLPGRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNHWN 311          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYB_MOUSE (Myb proto-oncogene protein OS=Mus musculus GN=Myb PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.773e-22
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  V+ YG   W  + K     R GK CR RW N+L P++K+ ++T EE+  I   H+ LGNRW+ IA  LPGRTDN IKN W++
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNS 187          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYB_HUMAN (Myb proto-oncogene protein OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.773e-22
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  V+ YG   W  + K     R GK CR RW N+L P++K+ ++T EE+  I   H+ LGNRW+ IA  LPGRTDN IKN W++
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNS 187          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYB_CHICK (Myb proto-oncogene protein OS=Gallus gallus GN=MYB PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.773e-22
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  V+ YG   W  + K     R GK CR RW N+L P++K+ ++T EE+  I   H+ LGNRW+ IA  LPGRTDN IKN W++
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNS 187          
BLAST of CK933117 vs. ExPASy Swiss-Prot
Match: MYB_BOVIN (Myb proto-oncogene protein OS=Bos taurus GN=MYB PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.773e-22
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  130 LKKGPWTPEEDQILINYVKLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 426
            L KGPWT EEDQ +I  V+ YG   W  + K     R GK CR RW N+L P++K+ ++T EE+  I   H+ LGNRW+ IA  LPGRTDN IKN W++
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNS 187          
The following BLAST results are available for this feature:
BLAST of CK933117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MYBB_HUMAN3.015e-2250.51Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=... [more]
MYBA_XENLA3.015e-2250.51Myb-related protein A OS=Xenopus laevis GN=mybl1 P... [more]
MYB_AVIMB3.938e-2249.49Transforming protein Myb OS=Avian myeloblastosis v... [more]
MYBA_MOUSE5.143e-2250.51Myb-related protein A OS=Mus musculus GN=Mybl1 PE=... [more]
MYBA_HUMAN5.143e-2250.51Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=... [more]
MYB98_ARATH6.717e-2249.02Transcription factor MYB98 OS=Arabidopsis thaliana... [more]
MYB_MOUSE8.773e-2250.51Myb proto-oncogene protein OS=Mus musculus GN=Myb ... [more]
MYB_HUMAN8.773e-2250.51Myb proto-oncogene protein OS=Homo sapiens GN=MYB ... [more]
MYB_CHICK8.773e-2250.51Myb proto-oncogene protein OS=Gallus gallus GN=MYB... [more]
MYB_BOVIN8.773e-2250.51Myb proto-oncogene protein OS=Bos taurus GN=MYB PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_E09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933117 ID=CK933117; Name=CK933117; organism=Citrus sinensis; type=EST; length=863bp
GGGTCACATTGTATTCGTGCTTTGAGATCAAACAATTTGATCAGAGAGAA
TTAAAAAGATACATAGCAAAGTTAAATATACTGCGGTGGTCCAAAAATGG
TGAGAGCTCCATGCTGCGAGAAGATGGGATTGAAGAAAGGTCCATGGACT
CCTGAAGAAGATCAAATTTTAATCAATTACGTTAAACTTTATGGCCATGG
CAACTGGCGGGCACTTCCCAAACAAGCAGGTTTATTAAGATGTGGAAAGA
GTTGCCGGCTCCGGTGGATAAATTACTTGCGGCCGGATATTAAACGGGGA
AATTTCACCAGAGAAGAAGAGGACACTATCATCAACCTACATGAAATGCT
CGGAAATAGATGGTCAGCAATCGCAGCAAGACTACCGGGAAGAACGGACA
ACGAAATTAAAAATGTTTGGCACACCCACTTGAAAAAGCGTCTCAAGCAA
AAGCAACAACAAGAGCCCGTGATTAATAATCATAGTAACGCTAATCATGT
TACGGCGAGATCCGAGATCTGCAGCGGCGCCAGTACTCCCGATCGGCAGA
CTCGACTACTACTTCAAGCGACATGTCGTCCGTCACCTCCTCCGCGGCTA
ATAACGCTTGCGTGAAAACAGAGCCGTCGTCGTCCGAAAACAATCACGAC
AGCTTGGTTGAAATAGATGAGAATTTTTGGACGGAAGTGTTGTCGGCTGA
GAACTCGGGCATTAGTATTGAGGACAGCAATGATCGTTTTTCAGCGGTTG
GAAGCGCCGACCCACTGTCTATAGTTGAATTTCAATCATCACTCGATGAT
TTTAGACCAGGTTCTACTTTGTGTGATAACACCGACTTTTGGTTCAATCT
TTTCACCAAAGCT
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