CK933120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y3970_STRGG (UPF0678 fatty acid-binding protein-like protein SGR_3970 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=SGR_3970 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.539e-18 Identity = 49/160 (30.63%), Postives = 87/160 (54.37%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASKVREVS---RVFELVNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 +HP + P+++LLG W G G +P ++G+E+ F+H G+ + Y TW L P+ E+GYWR + D +EVV+A+ G++E+ G ++ I+L ++ V + S R++ V +L +V + AT + LRP++ A L+K+ Sbjct: 8 LHPDLVPLAFLLGNWAGAGVSDFPGAEKCNFGQEVTFSHD-GRDFLEYVSHTWVLDDEGKQVRPLETETGYWRIDKDRKVEVVMARDQGVIEIWYGELADQKPQIDLVTDAVARTAASGPYSGGKRLYGYVKSDLMWVGEKATPEV-ELRPYMSAHLKKV 165
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y452_FRASC (UPF0678 fatty acid-binding protein-like protein Francci3_0452 OS=Frankia sp. (strain CcI3) GN=Francci3_0452 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 53/170 (31.18%), Postives = 91/170 (53.53%), Query Frame = 3 Query: 42 VPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGS-------GEPMHAESGYWR--PNPDGS--IEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASKVREVS---RVFELVNG-ELRFVVQMATNHLTSLRPHLKAVLRKL 506 V +H ++ P+++L+GTWRG+G GGY ++ F YG+E+ F + G+P + Y TW G P+ E+G+WR P DG +EV++A G+ E+ GT I+L ++ + R+V+ R++ LV G +L + + M ++ HL A L ++ Sbjct: 21 VDLHASLLPLAFLVGTWRGEGVGGYEGLDGFHYGQEITFA-ADGRPALGYVSHTWWADEPRDGREPGSPLATETGFWRVQPGEDGKPVVEVMLAHPFGIAEIYVGTVTGTR--IDLDHNVLIRTATARDVTRSVRLYGLVEGCDLAYAIDMEAEG-KPMQSHLSARLHRV 186
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y373_SALAI (UPF0678 fatty acid-binding protein-like protein Sare_0373 OS=Salinispora arenicola (strain CNS-205) GN=Sare_0373 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 39 GVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGYWRP-----NPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASKVREVS---RVFELVNGELRFVVQM-ATNHLTSLRPHLKAVL 497 G +HPA+ + +G WRG+G GGYPTI FDYG+E+ +H G+P + Y + W L P E G+WRP G E ++ TG++E+ G + +E ++ V +EV+ R+F +V G L + +M A H L PHL A L Sbjct: 31 GPKLHPALDGLLPYVGVWRGRGRGGYPTIEDFDYGQEIRISHD-GRPFLCYESRAWLLDEQSRPIRPAGREMGWWRPVLAGDRATGEWEALMTTPTGVMELHLGKRTGTQ--LEFATDAVVRTPTAKEVTAGHRLFGIVEGALLYAQEMAAVGH--GLTPHLSARL 191
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y1365_STRAW (UPF0678 fatty acid-binding protein-like protein SAV_1365 OS=Streptomyces avermitilis GN=SAV_1365 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.443e-17 Identity = 53/155 (34.19%), Postives = 78/155 (50.32%), Query Frame = 3 Query: 51 HPAIAPISYLLGTWRGQGSGGYPTINA-FDYGEELNFTHSGGKPVIAYTQKTWKLGSGE----PMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSE---LVGNASKVREVSRVFELVNG-------ELRFVVQMATNHLTS 470 H + P+ LLG+W G+G GGYPT+ F Y +EL F+H G +P + Y + W L + + P E G+WR PDG +E +I Q TG+ E+ G A I+L + L A KV R + L + +L V Q +HL++ Sbjct: 23 HALLEPVLGLLGSWYGRGEGGYPTLTGDFGYAQELTFSHDG-RPFLRYEARAWLLDADDAPLRPSARECGWWRLQPDGRVEALITQPTGIAEIMVG--RATGNTIDLSTHEVALAPTAKKVNATRRRYTLTDDDTLTFHHDLEAVGQPMQHHLSA 174
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y310_SALTO (UPF0678 fatty acid-binding protein-like protein Strop_0310 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=Strop_0310 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16 Identity = 54/166 (32.53%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 39 GVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGYWRPNPDG-----SIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASKVREVS---RVFELVNGELRFVVQM-ATNHLTSLRPHLKAVL 497 G +HP + + +G WRG+G GGYPTI FD+ +E+ +H G+P + Y + W L P E G+WRP DG E +++ TG++E+ G + +E ++ V +EV+ R+F +V G L + +M A H L PHL A L Sbjct: 31 GPKLHPTLDGLLPYIGVWRGRGRGGYPTIEDFDFAQEIRISHD-GRPFLCYESRAWLLDEQSRPIRPAGREMGWWRPVLDGDRATNEWEALMSTPTGVMELHLGKRTGTQ--LEFATDAVVRTPTAKEVTAGHRLFGIVEGALLYAQEMAAVGH--GLTPHLSARL 191
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: THAP4_HUMAN (THAP domain-containing protein 4 OS=Homo sapiens GN=THAP4 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16 Identity = 54/160 (33.75%), Postives = 90/160 (56.25%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASK---VREVSRVFEL-VNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 ++P + P+S++LGTW G+G YPT+ F Y EE++ +H G+P++ ++ ++ + +PMH E G+ R PD + V AQ+TG+VEV++G N +E I S + +K V +++R F L G+L V MAT + HL +K+ Sbjct: 418 MNPVVEPLSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHV-GQPMLNFSFNSFHPDTRKPMHRECGFIRLKPDTNKVAFVSAQNTGVVEVEEGEVNGQELCIASHSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHVTYKKV 575
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y4030_STRAW (UPF0678 fatty acid-binding protein-like protein SAV_4030 OS=Streptomyces avermitilis GN=SAV_4030 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15 Identity = 47/160 (29.38%), Postives = 85/160 (53.12%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASKVREVS---RVFELVNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 +H + P+++LLG W G G +P ++G+E++FTH G+ + Y TW L + P+ ESG+WR + +E V+ + G+VE+ G A++ I+L ++ V + S R++ V +L +V + T + LRP++ A L+K+ Sbjct: 8 LHKDLVPLAFLLGNWAGAGVHDFPGSEKCNFGQEVSFTHD-GRDFLEYHSHTWVLDADGNKVRPLETESGFWRVDAARKVEAVMTRDDGVVEIWYGELAAKKPQIDLVTDAVARTAAAGPYSGGKRLYGYVKSDLMWVGEKQTPEV-ELRPYMSAHLKKV 165
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: THAP4_RAT (THAP domain-containing protein 4 OS=Rattus norvegicus GN=Thap4 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15 Identity = 52/160 (32.50%), Postives = 91/160 (56.88%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASK---VREVSRVFEL-VNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 ++P + P+S++LGTW + G G +PT+ F Y EE++ +H G +P++ ++ ++ + +PMH E G+ R PD + V AQ+TG+VEV++G N +E + S + +K V++++R F L G+L V MAT + HL +K+ Sbjct: 410 LNPVVEPLSWMLGTWLSEPPGVGTFPTLQPFQYLEEVHISHVG-QPMLNFSFNSFHPETHKPMHRECGFIRLKPDTNKVAFVSAQNTGVVEVEEGEVNGQELCVSSHSISRISFAKEPHVQQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHITYKKV 567
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: THAP4_BOVIN (THAP domain-containing protein 4 OS=Bos taurus GN=THAP4 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15 Identity = 54/158 (34.18%), Postives = 86/158 (54.43%), Query Frame = 3 Query: 54 PAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASK---VREVSRVFEL-VNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 P + P+S++LGTW + G+G +PT+ F Y EE + +H G +P++ ++ + + +PMH E G+ R PD + V AQ+TG+VEV++G N +E I S + +K V +++R F L G L V MAT L HL +K+ Sbjct: 427 PVVEPLSWMLGTWLSEPPGAGTFPTLQPFRYLEEAHISHVG-QPMLNFSFNAFHPDTHKPMHRECGFIRLEPDTNKVAFVSAQNTGIVEVEEGEVNGQELCIASHSIARISFAKEPHVEQITRKFRLNSEGNLEQTVSMATT-TQPLTQHLHVTYKKV 582
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: THAP4_MOUSE (THAP domain-containing protein 4 OS=Mus musculus GN=Thap4 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 52/160 (32.50%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASK---VREVSRVFEL-VNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 ++P + P+S++LGTW G G +PT+ F Y EE++ +H G +P++ ++ ++ + +PMH E G+ R PD + V AQ+TG+VEV++G N +E + S + +K V +++R F L G+L V MAT + HL +K+ Sbjct: 410 LNPVVEPLSWMLGTWLSDPPGVGTFPTLQPFQYLEEVHISHVG-QPMLNFSFNSFHPETHKPMHRECGFIRLKPDTNKVAFVSAQNTGIVEVEEGEVNGQELCVSSHSVSRISFAKEPHVEQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHITYKKV 567 The following BLAST results are available for this feature:
BLAST of CK933120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933120 ID=CK933120; Name=CK933120; organism=Citrus sinensis; type=EST; length=673bpback to top |