CK933132

Overview
NameCK933132
Unique NameCK933132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AZ_SHEEP (Histone H2A.Z OS=Ovis aries GN=H2AFZ PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 3 
Query:   90 AATKGGRGRSK-DTKPVSRSHKAGLQFPVGRVARFLKKGRYAQ-RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKK 449
            A  K G+   K  TK VSRS +AGLQFPVGR+ R LK    +  RVG+ +                   GNA++D K  RI PR +QLA++ DEE   L+   TIA GGV+P+IH++L+ KK
Sbjct:    2 AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AZ_RAT (Histone H2A.Z OS=Rattus norvegicus GN=H2afz PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 3 
Query:   90 AATKGGRGRSK-DTKPVSRSHKAGLQFPVGRVARFLKKGRYAQ-RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKK 449
            A  K G+   K  TK VSRS +AGLQFPVGR+ R LK    +  RVG+ +                   GNA++D K  RI PR +QLA++ DEE   L+   TIA GGV+P+IH++L+ KK
Sbjct:    2 AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AZ_PONAB (Histone H2A.Z OS=Pongo abelii GN=H2AFZ PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 3 
Query:   90 AATKGGRGRSK-DTKPVSRSHKAGLQFPVGRVARFLKKGRYAQ-RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKK 449
            A  K G+   K  TK VSRS +AGLQFPVGR+ R LK    +  RVG+ +                   GNA++D K  RI PR +QLA++ DEE   L+   TIA GGV+P+IH++L+ KK
Sbjct:    2 AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AZ_ONCMY (Histone H2A.Z OS=Oncorhynchus mykiss GN=h2afz PE=1 SV=4)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 3 
Query:   90 AATKGGRGRSK-DTKPVSRSHKAGLQFPVGRVARFLKKGRYAQ-RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKK 449
            A  K G+   K  TK VSRS +AGLQFPVGR+ R LK    +  RVG+ +                   GNA++D K  RI PR +QLA++ DEE   L+   TIA GGV+P+IH++L+ KK
Sbjct:    2 AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AZ_MOUSE (Histone H2A.Z OS=Mus musculus GN=H2afz PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 3 
Query:   90 AATKGGRGRSK-DTKPVSRSHKAGLQFPVGRVARFLKKGRYAQ-RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKK 449
            A  K G+   K  TK VSRS +AGLQFPVGR+ R LK    +  RVG+ +                   GNA++D K  RI PR +QLA++ DEE   L+   TIA GGV+P+IH++L+ KK
Sbjct:    2 AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AZ_HUMAN (Histone H2A.Z OS=Homo sapiens GN=H2AFZ PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 3 
Query:   90 AATKGGRGRSK-DTKPVSRSHKAGLQFPVGRVARFLKKGRYAQ-RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKK 449
            A  K G+   K  TK VSRS +AGLQFPVGR+ R LK    +  RVG+ +                   GNA++D K  RI PR +QLA++ DEE   L+   TIA GGV+P+IH++L+ KK
Sbjct:    2 AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AZ_CHICK (Histone H2A.Z OS=Gallus gallus GN=H2AFZ PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 3 
Query:   90 AATKGGRGRSKD-TKPVSRSHKAGLQFPVGRVARFLKKGRYAQ-RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKK 449
            A  K G+   K  TK VSRS +AGLQFPVGR+ R LK    +  RVG+ +                   GNA++D K  RI PR +QLA++ DEE   L+   TIA GGV+P+IH++L+ KK
Sbjct:    2 AGGKAGKDSGKTKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AZ_BOVIN (Histone H2A.Z OS=Bos taurus GN=H2AFZ PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 3 
Query:   90 AATKGGRGRSK-DTKPVSRSHKAGLQFPVGRVARFLKKGRYAQ-RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKK 449
            A  K G+   K  TK VSRS +AGLQFPVGR+ R LK    +  RVG+ +                   GNA++D K  RI PR +QLA++ DEE   L+   TIA GGV+P+IH++L+ KK
Sbjct:    2 AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AV2_ORYSJ (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica GN=Os10g0418000 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 3 
Query:   75 MSSEAAATKGGRGRSKDTK--PVSRSHKAGLQFPVGRVARFLKKGRYAQ--RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKA 452
            ++++  A K    + KD K  PVSRS +AG+QFPVGR+ R L KGR +   RVG+ +                   GNA++D K  RI PR +QLA++ DEE   L+   TIA GGV+P+IH++L+ K A
Sbjct:   10 LAAKTTAAKAAADKDKDRKKAPVSRSSRAGIQFPVGRIHRQL-KGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTA 137
[Close]
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2AZ_DEBHA (Histone H2A.Z OS=Debaryomyces hansenii GN=HTZ1 PE=3 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.182e-16
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 3 
Query:  102 GGRGRSKDTKPVSRSH--KAGLQFPVGRVARFLKKGRYAQ-RVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPK 446
            GG+G+S +T   + SH  +AGLQFPVGR+ R+LK+    + RVGS S                   GNAA+D K  RI PR +QLA++ DEE   L+   TIA GGVLP+I++ LL K
Sbjct:    9 GGKGKSSETAKSTTSHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLI-KATIAFGGVLPHINKALLLK 125
The following BLAST results are available for this feature:
BLAST of CK933132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
H2AZ_SHEEP5.306e-1743.44Histone H2A.Z OS=Ovis aries GN=H2AFZ PE=2 SV=3[more]
H2AZ_RAT5.306e-1743.44Histone H2A.Z OS=Rattus norvegicus GN=H2afz PE=1 S... [more]
H2AZ_PONAB5.306e-1743.44Histone H2A.Z OS=Pongo abelii GN=H2AFZ PE=2 SV=3[more]
H2AZ_ONCMY5.306e-1743.44Histone H2A.Z OS=Oncorhynchus mykiss GN=h2afz PE=1... [more]
H2AZ_MOUSE5.306e-1743.44Histone H2A.Z OS=Mus musculus GN=H2afz PE=1 SV=2[more]
H2AZ_HUMAN5.306e-1743.44Histone H2A.Z OS=Homo sapiens GN=H2AFZ PE=1 SV=2[more]
H2AZ_CHICK5.306e-1743.44Histone H2A.Z OS=Gallus gallus GN=H2AFZ PE=1 SV=3[more]
H2AZ_BOVIN5.306e-1743.44Histone H2A.Z OS=Bos taurus GN=H2AFZ PE=1 SV=2[more]
H2AV2_ORYSJ5.306e-1741.54Probable histone H2A variant 2 OS=Oryza sativa sub... [more]
H2AZ_DEBHA1.182e-1644.92Histone H2A.Z OS=Debaryomyces hansenii GN=HTZ1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933132 ID=CK933132; Name=CK933132; organism=Citrus sinensis; type=EST; length=655bp
GCGGGGATCGCAAACCGCTTTGAATTTATNNNAAACTCCCAATCTTCCTC
NNAAGAAAAACCCATTTCTCAACCATGAGTTCAGAAGCTGCAGCAACCAA
GGGTGGGCGGGGCAGGTCCAAGGACACGAAACCGGTGTCCAGATCCCACA
AGGCCGGTCTCCAGTTCCCGGTTGGCCGTGTCGCTCGCTTCCTCAAGAAA
GGCCGATACGCCCAGCGCGTCGGATCCGGCTCTCCCGTCTATCTTTCCGC
CGTCCTTGAATACCTTGCTGCTGAGGTTTTGGAGTTGGCTGGGAACGCGG
CGAGGGACAACAAGAAGAACAGAATCATTCCAAGGCGCATTCAGTTGGCT
GTGAAAAACGACGAGGAGTTTAGCAAACTGCTTGGCTCTGTGACTATCGC
TAATGGTGGTGTGTTGCCTAACATTCATCAGAACTTGCTGCCGAAGAAAG
CTGCAGCACGGAAGGGCGAAATTGGATCCGTGTCTCAGGAGTTTTAGGGG
TTTAATTAGGGATCTGGAATCTTCGATTTCGGGTTATGTTTATAAGTATG
TAGTGAATTTGGGTTTTCACTTTCATATGTGTAAATCTCATTTTGGATAA
TTGAGTAAAAATCCTGGGTTTCTTCGCAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
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