CK933132

Overview
NameCK933132
Unique NameCK933132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1534 contig Csv1_Contig1534:1..655. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A1_ORYSI (Probable histone H2A.1 OS=Oryza sativa subsp. indica GN=OsI_26380 PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34
Identity = 74/120 (61.67%), Postives = 87/120 (72.50%), Query Frame = 3
Query:  105 GRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARK 464
            G G +K  K  SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P                  GNAARDNKK RI+PR IQLAV+NDEE +KLLG  TIA+GGV+PNIHQ+LLPKKA + K
Sbjct:    9 GAGAAK--KATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126          
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34
Identity = 79/129 (61.24%), Postives = 87/129 (67.44%), Query Frame = 3
Query:   75 MSSEAAATKGG---RGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKA 452
            M + A   KG    +G     KPVSRS KAGLQFPVGR+ RFLKKGRYAQRVGSG+P                  GNAARDNKKNRIIPR + LAV+NDEE  KLL  VTIA+GGVLPNI+  LLPKKA
Sbjct:    1 MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKA 129          
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A3_ORYSJ (Probable histone H2A.3 OS=Oryza sativa subsp. japonica GN=Os08g0427700 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34
Identity = 73/116 (62.93%), Postives = 84/116 (72.41%), Query Frame = 3
Query:  111 GRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAA 458
            G S   K  SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P                  GNAARDNKK RI+PR IQLAV+NDEE S+LLG+VTIANGGV+PNIH  LLPKKA +
Sbjct:    9 GSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGS 124          
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A3_ORYSI (Probable histone H2A.3 OS=Oryza sativa subsp. indica GN=OsI_028288 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34
Identity = 73/116 (62.93%), Postives = 84/116 (72.41%), Query Frame = 3
Query:  111 GRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAA 458
            G S   K  SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P                  GNAARDNKK RI+PR IQLAV+NDEE S+LLG+VTIANGGV+PNIH  LLPKKA +
Sbjct:    9 GSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGS 124          
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A1_PICST (Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.149e-34
Identity = 78/132 (59.09%), Postives = 90/132 (68.18%), Query Frame = 3
Query:  102 GGRGR--SKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 491
            GG+G+  S +    SRS KAGL FPVGRV R L+KG YAQRVGSG+P                  GNAARDNKK+RIIPR +QLA++NDEE +KLLG VTIA GGVLPNIHQNLLPKK+    G+    SQE
Sbjct:    3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKS----GKSAKASQE 130          
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A_KLULA (Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33
Identity = 73/122 (59.84%), Postives = 85/122 (69.67%), Query Frame = 3
Query:   99 KGGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARK 464
            KGG+  S      SRS KAGL FPVGRV R L+KG YAQR+GSG+P                  GNAARDNKK RIIPR +QLA++ND+E +KLLG+VTIA GGVLPNIHQNLLPKK++  K
Sbjct:    4 KGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSKAK 125          
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33
Identity = 73/120 (60.83%), Postives = 86/120 (71.67%), Query Frame = 3
Query:  105 GRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARK 464
            G G +K  K  SRS K GLQFPVGR+ARFLK G+YA+RVG+G+P                  GNAARDNKK RI+PR IQLAV+NDEE +KLLG  TIA+GGV+PNIHQ+LLPKKA + K
Sbjct:    9 GAGAAK--KATSRSSKGGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126          
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33
Identity = 74/120 (61.67%), Postives = 86/120 (71.67%), Query Frame = 3
Query:  105 GRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARK 464
            G G +K  K +SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P                  GNAARDNKK RI+PR IQLAV+NDEE S+LLG VTIA+GGV+PNIH  LLPKKA   K
Sbjct:    9 GSGAAK--KAISRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGMVTIASGGVMPNIHNLLLPKKAGGSK 126          
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A2_DEBHA (Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=3 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 1.815e-33
Identity = 77/132 (58.33%), Postives = 91/132 (68.94%), Query Frame = 3
Query:  102 GGRGR--SKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 491
            GG+G+  S +    SRS KAGL FPVGRV R L+KG YAQRVGSG+P                  GNAARDNKK+RIIPR +QLA++NDEE +KLLG VTIA GGVLPNIHQ+LLP    A+K + G+ SQE
Sbjct:    3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLP----AKKAKAGNASQE 130          
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A2_CANAL (Histone H2A.2 OS=Candida albicans GN=HTA2 PE=3 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 1.815e-33
Identity = 76/132 (57.58%), Postives = 91/132 (68.94%), Query Frame = 3
Query:  102 GGRGR--SKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 491
            GG+G+  S +    SRS KAGL FPVGRV R L+KG YAQR+GSG+P                  GNAARDNKK+RIIPR +QLA++NDEE +KLLG VTIA GGVLPNIHQ+LLP    A+K + G+ SQE
Sbjct:    3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQSLLP----AKKAKAGAASQE 130          
The following BLAST results are available for this feature:
BLAST of CK933132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
H2A1_ORYSI4.777e-3461.67Probable histone H2A.1 OS=Oryza sativa subsp. indi... [more]
H2A_EUPES6.239e-3461.24Histone H2A OS=Euphorbia esula PE=2 SV=1[more]
H2A3_ORYSJ6.239e-3462.93Probable histone H2A.3 OS=Oryza sativa subsp. japo... [more]
H2A3_ORYSI6.239e-3462.93Probable histone H2A.3 OS=Oryza sativa subsp. indi... [more]
H2A1_PICST8.149e-3459.09Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1[more]
H2A_KLULA1.390e-3359.84Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 S... [more]
H2A8_ORYSI1.390e-3360.83Probable histone H2A.8 OS=Oryza sativa subsp. indi... [more]
H2A7_WHEAT1.390e-3361.67Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 S... [more]
H2A2_DEBHA1.815e-3358.33Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=... [more]
H2A2_CANAL1.815e-3357.58Histone H2A.2 OS=Candida albicans GN=HTA2 PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933132 ID=CK933132; Name=CK933132; organism=Citrus sinensis; type=EST; length=655bp
GCGGGGATCGCAAACCGCTTTGAATTTATNNNAAACTCCCAATCTTCCTC
NNAAGAAAAACCCATTTCTCAACCATGAGTTCAGAAGCTGCAGCAACCAA
GGGTGGGCGGGGCAGGTCCAAGGACACGAAACCGGTGTCCAGATCCCACA
AGGCCGGTCTCCAGTTCCCGGTTGGCCGTGTCGCTCGCTTCCTCAAGAAA
GGCCGATACGCCCAGCGCGTCGGATCCGGCTCTCCCGTCTATCTTTCCGC
CGTCCTTGAATACCTTGCTGCTGAGGTTTTGGAGTTGGCTGGGAACGCGG
CGAGGGACAACAAGAAGAACAGAATCATTCCAAGGCGCATTCAGTTGGCT
GTGAAAAACGACGAGGAGTTTAGCAAACTGCTTGGCTCTGTGACTATCGC
TAATGGTGGTGTGTTGCCTAACATTCATCAGAACTTGCTGCCGAAGAAAG
CTGCAGCACGGAAGGGCGAAATTGGATCCGTGTCTCAGGAGTTTTAGGGG
TTTAATTAGGGATCTGGAATCTTCGATTTCGGGTTATGTTTATAAGTATG
TAGTGAATTTGGGTTTTCACTTTCATATGTGTAAATCTCATTTTGGATAA
TTGAGTAAAAATCCTGGGTTTCTTCGCAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
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