CK933132
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A1_ORYSI (Probable histone H2A.1 OS=Oryza sativa subsp. indica GN=OsI_26380 PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34 Identity = 74/120 (61.67%), Postives = 87/120 (72.50%), Query Frame = 3 Query: 105 GRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARK 464 G G +K K SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PR IQLAV+NDEE +KLLG TIA+GGV+PNIHQ+LLPKKA + K Sbjct: 9 GAGAAK--KATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34 Identity = 79/129 (61.24%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 75 MSSEAAATKGG---RGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKA 452 M + A KG +G KPVSRS KAGLQFPVGR+ RFLKKGRYAQRVGSG+P GNAARDNKKNRIIPR + LAV+NDEE KLL VTIA+GGVLPNI+ LLPKKA Sbjct: 1 MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKA 129
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A3_ORYSJ (Probable histone H2A.3 OS=Oryza sativa subsp. japonica GN=Os08g0427700 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34 Identity = 73/116 (62.93%), Postives = 84/116 (72.41%), Query Frame = 3 Query: 111 GRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAA 458 G S K SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PR IQLAV+NDEE S+LLG+VTIANGGV+PNIH LLPKKA + Sbjct: 9 GSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGS 124
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A3_ORYSI (Probable histone H2A.3 OS=Oryza sativa subsp. indica GN=OsI_028288 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34 Identity = 73/116 (62.93%), Postives = 84/116 (72.41%), Query Frame = 3 Query: 111 GRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAA 458 G S K SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PR IQLAV+NDEE S+LLG+VTIANGGV+PNIH LLPKKA + Sbjct: 9 GSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGS 124
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A1_PICST (Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.149e-34 Identity = 78/132 (59.09%), Postives = 90/132 (68.18%), Query Frame = 3 Query: 102 GGRGR--SKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 491 GG+G+ S + SRS KAGL FPVGRV R L+KG YAQRVGSG+P GNAARDNKK+RIIPR +QLA++NDEE +KLLG VTIA GGVLPNIHQNLLPKK+ G+ SQE Sbjct: 3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKS----GKSAKASQE 130
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A_KLULA (Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33 Identity = 73/122 (59.84%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 99 KGGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARK 464 KGG+ S SRS KAGL FPVGRV R L+KG YAQR+GSG+P GNAARDNKK RIIPR +QLA++ND+E +KLLG+VTIA GGVLPNIHQNLLPKK++ K Sbjct: 4 KGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSKAK 125
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33 Identity = 73/120 (60.83%), Postives = 86/120 (71.67%), Query Frame = 3 Query: 105 GRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARK 464 G G +K K SRS K GLQFPVGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PR IQLAV+NDEE +KLLG TIA+GGV+PNIHQ+LLPKKA + K Sbjct: 9 GAGAAK--KATSRSSKGGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33 Identity = 74/120 (61.67%), Postives = 86/120 (71.67%), Query Frame = 3 Query: 105 GRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARK 464 G G +K K +SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PR IQLAV+NDEE S+LLG VTIA+GGV+PNIH LLPKKA K Sbjct: 9 GSGAAK--KAISRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGMVTIASGGVMPNIHNLLLPKKAGGSK 126
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A2_DEBHA (Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=3 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 1.815e-33 Identity = 77/132 (58.33%), Postives = 91/132 (68.94%), Query Frame = 3 Query: 102 GGRGR--SKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 491 GG+G+ S + SRS KAGL FPVGRV R L+KG YAQRVGSG+P GNAARDNKK+RIIPR +QLA++NDEE +KLLG VTIA GGVLPNIHQ+LLP A+K + G+ SQE Sbjct: 3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLP----AKKAKAGNASQE 130
BLAST of CK933132 vs. ExPASy Swiss-Prot
Match: H2A2_CANAL (Histone H2A.2 OS=Candida albicans GN=HTA2 PE=3 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 1.815e-33 Identity = 76/132 (57.58%), Postives = 91/132 (68.94%), Query Frame = 3 Query: 102 GGRGR--SKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRRIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 491 GG+G+ S + SRS KAGL FPVGRV R L+KG YAQR+GSG+P GNAARDNKK+RIIPR +QLA++NDEE +KLLG VTIA GGVLPNIHQ+LLP A+K + G+ SQE Sbjct: 3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQSLLP----AKKAKAGAASQE 130 The following BLAST results are available for this feature:
BLAST of CK933132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933132 ID=CK933132; Name=CK933132; organism=Citrus sinensis; type=EST; length=655bpback to top |