CK933138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 365.155 bits (936), Expect = 2.790e-100 Identity = 187/289 (64.71%), Postives = 228/289 (78.89%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 V+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGTS ED L +VVGTPGRVFD ++R+ R D I++F+LDEADEMLS GFK+QIY IF LLPP QV + SATMP + LE+T KFM PVRILVK+DELTLEGIKQF+VNVE+EE+K E L DLY+++++TQ+VIF NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIG Sbjct: 62 VLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLRDA-QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIG 349
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 3.644e-100 Identity = 180/288 (62.50%), Postives = 225/288 (78.12%), Query Frame = 3 Query: 6 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 I QAQSGTGKTATF +L+ +D E QA+VL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGTS+ D + L +G VV GTPGR DM+++ LR N+++ +LDEADE+L++GF++QIYDI++ LP QV V SAT+P LE+T KFM PVRILVKRDELTLEG+KQ+ + VE+EEWK +TLCDLY+TL ITQ+VIF NT++KVDWLT +M+ + TV + HGDM Q RD IM EFRSG SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIG Sbjct: 65 IAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLEAGQQVVSGTPGRCLDMIKKGCLRTKNLKMLILDEADELLNKGFQEQIYDIYRYLPAATQVVVVSATLPHSVLEMTSKFMTDPVRILVKRDELTLEGLKQYFIAVEQEEWKFDTLCDLYDTLTITQAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQKDRDSIMNEFRSGRSRVLISTDVWARGIDVQQVSLVINYDLPPNRENYIHRIG 352
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 363.614 bits (932), Expect = 8.117e-100 Identity = 183/289 (63.32%), Postives = 231/289 (79.93%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 V+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ ALG ++ +KVHAC+GGTS ED L +VVGTPGRVFD ++R+ + DNI++F+LDEADEMLS GFK+QIY IF +LPP QV + SATMP + LE+T KFM PVRILVK+DELTLEGIKQF+VNVE+E++K + L DLY+++++TQ+VIF NTRRKV+ LT ++ + + TVS+ + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLPT ENY+HRIG Sbjct: 63 VLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLRDA-QIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEMLSTGFKEQIYQIFTMLPPTTQVVLLSATMPRDVLEVTAKFMQNPVRILVKKDELTLEGIKQFYVNVEEEQFKYDCLTDLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIG 350
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.531e-98 Identity = 179/289 (61.94%), Postives = 228/289 (78.89%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 V+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ VKVHAC+GGTS ED L +VVGTPGRV D ++R + DNI++F+LDEADEMLS GF++QIY IF +LPP QV + SAT+P + LE+T KFM P+RILVK+DELTLEGIKQF++NVE+E++K + L DLY+++++TQ+VIF NTRRKV+ LT K+ + TVS+ + D+ Q RD+IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLPT ENY+HRIG Sbjct: 63 VLAQAQSGTGKTGTFSIAALQRIDSSIKAPQALILAPTRELALQIQKVVIALAFHMDVKVHACIGGTSFVEDTEGLKDA-QIVVGTPGRVSDNIQRHRFKTDNIKMFILDEADEMLSSGFREQIYQIFTMLPPTTQVVLLSATLPGDVLEVTTKFMRNPIRILVKKDELTLEGIKQFYINVEEEQYKFDCLSDLYDSISVTQAVIFCNTRRKVEELTQKLTESNFTVSSIYSDLPQQERDVIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIG 350
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 5.817e-98 Identity = 182/291 (62.54%), Postives = 223/291 (76.63%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR--GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF G+LQ +D E QALVL+PTRELA Q E V+ LGDYL V HAC GG ++++D + +S VV GTPGRV DM++RQ L N +I VLDEADE+L GFK QIYDIF LPP IQV V SATM + LEIT+KFM+ PV+ILVKRDE++L+ IKQ++V+VEKEEWK +TLCDLY++L ITQ VIF NTR+KVDWL+ K+ + +VS+ HGDM Q RD +M +FRSG +RVLI+TD+ ARGIDVQQ+SLVINYD+P ENY+HRIG Sbjct: 63 VIAQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHACTGGKALQQDIKKVSKNCQVVSGTPGRVLDMIKRQVLNVRNCKILVLDEADELLGETLGFKQQIYDIFTKLPPTIQVVVVSATMSKDILEITKKFMSDPVKILVKRDEISLDVIKQYYVDVEKEEWKFDTLCDLYDSLTITQCVIFCNTRKKVDWLSRKLTQTNFSVSSMHGDMKQEERDQVMNDFRSGKARVLISTDVWARGIDVQQISLVINYDIPDNLENYIHRIG 353
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 9.923e-98 Identity = 172/288 (59.72%), Postives = 227/288 (78.82%), Query Frame = 3 Query: 6 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 I QAQSGTGKTATF G+L+ LD ECQALVL+PTRELA QI+ V++ LGDY+ ++ +AC+GG +V D + L G +V GTPGRV D+++R++L +I++ +LDEADE+ ++GFK+QIY+I++ LPP +QV V SAT+ E LE+T KF PV+ILVKR+E++L GIKQ+++ EKE+WK +TLCDLY+ L ITQ+VIF NT+ KV+WLTD+MR ++ TV A HGDM Q RD IM +FRSG+SRVLI+TD+ ARGIDVQQ+SLVINYDLP ENY+HRIG Sbjct: 67 IAQAQSGTGKTATFSIGMLEVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYMNIQTYACIGGKNVGTDIKRLQQGQQIVSGTPGRVLDVIKRRNLSTRHIKMLILDEADELFTKGFKEQIYEIYKHLPPGVQVVVVSATLTHEVLEMTGKFTTDPVKILVKREEVSLSGIKQYYIQCEKEDWKFDTLCDLYDNLTITQAVIFCNTKIKVNWLTDQMRKQNFTVVAMHGDMKQEERDAIMNDFRSGNSRVLISTDVWARGIDVQQISLVINYDLPLDKENYIHRIG 354
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1) HSP 1 Score: 355.525 bits (911), Expect = 2.211e-97 Identity = 177/291 (60.82%), Postives = 227/291 (78.01%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR--GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF G+LQ +D + QALVL+PTRELA QI +V+R LGDY+ V AC GG ++++D ++ G HV+ GTPGRV DM++R+ + ++++ VLDEADE+LS GFK Q+YDIF LP +QV V SATM LE+T+KFM+ PV+ILVKRDE++LEGIKQ+H+NV+KEEWK +TLCDLY++L ITQ VIF NT++KVDWL+ K+ + V++ HGDM Q+ RD +M +FRSGSSRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIG Sbjct: 63 VIAQAQSGTGKTATFTIGMLQVIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYMNVVALACTGGKALQQDISKVNKGCHVMSGTPGRVLDMIKRRIINTRHVKMLVLDEADELLSETLGFKQQLYDIFTKLPSSVQVVVVSATMSKVVLEVTKKFMSDPVKILVKRDEVSLEGIKQYHINVDKEEWKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSHKLIQNNFAVASIHGDMKQDDRDKVMSDFRSGSSRVLISTDVWARGIDVQQVSLVINYDLPELLENYIHRIG 353
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 4.924e-97 Identity = 182/292 (62.33%), Postives = 226/292 (77.40%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR--GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF G+LQ +D + QALVL+PTRELA QI KV+ LGDY+ VK +A GG ++++D ++I G V+ GTPGRV DM++R+ + +++I VLDEADE+LS GFK QIYDIF LP QV V SATM PE LEIT+KFMN PV+ILVKRDE+TLEGIKQ++VNVEKEEWK +TLCD+Y++L ITQ VIF N+++KVDWL K++ + V + HGDM Q+ RD +M EFR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIG Sbjct: 63 VIAQAQSGTGKTATFTIGMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKDDLKKIQKHGCQVISGTPGRVLDMIKRRLIETRHVQILVLDEADELLSDTLGFKHQIYDIFTKLPRTSQVVVVSATMSPEILEITKKFMNDPVKILVKRDEITLEGIKQYYVNVEKEEWKFDTLCDIYDSLTITQCVIFCNSKKKVDWLAHKLKQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLISTDVWARGIDVQQVSLVINYDLPEITENYVHRIG 354
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A_DICDI (Eukaryotic initiation factor 4A OS=Dictyostelium discoideum GN=tifA PE=3 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 2.444e-96 Identity = 173/288 (60.07%), Postives = 227/288 (78.82%), Query Frame = 3 Query: 6 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 I QAQSGTGKTATF G LQ ++ + Q L+L+PTRELAQQI+KV AL +++ ++VHACVGG ++ +D + L +GVH+V GTPGRV DM+ R+SL +I++ +LDEADEMLS GF+ QI D+++ LP Q+ + SAT+ + + +T KFM KPVRIL+KRDELTL+GIKQF V+VEKE+WK TLCD+Y++L ITQ+VIF NT++KVD LT++MR + TV++ HGDM Q R+ I++ FRSG +RVLITTD+LARGIDVQQVSLVINYDLP ENY+HRIG Sbjct: 73 IAQAQSGTGKTATFSIGALQCVEVNVRSPQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGGKNLSDDVKKLETGVHIVSGTPGRVLDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGTQIVLVSATLTQDVVSMTEKFMTKPVRILLKRDELTLDGIKQFFVSVEKEDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIG 360
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: FAL1_PHANO (ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria nodorum GN=FAL1 PE=3 SV=3) HSP 1 Score: 351.288 bits (900), Expect = 4.169e-96 Identity = 179/288 (62.15%), Postives = 215/288 (74.65%), Query Frame = 3 Query: 6 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 I QAQSGTGKTATF ILQ V+ LGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRV DM+RR++LR NI++ VLDEADE+L+RGF++QIYD+++ LPP QV V SAT+P + LE+T KFM PVRILVKRDELTLEG+KQ+ + +EKEEWK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HGDM Q RD IM++FR +SRVLI+TD+ ARGIDVQQVSLVINYDLP+ ENY+HRIG Sbjct: 66 IAQAQSGTGKTATFSISILQS-------------------------VIMGLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLEMTTKFMTDPVRILVKRDELTLEGLKQYFIAIEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQRERDSIMQDFRQANSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIG 328 The following BLAST results are available for this feature:
BLAST of CK933138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933138 ID=CK933138; Name=CK933138; organism=Citrus sinensis; type=EST; length=870bpback to top |