CK933138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2) HSP 1 Score: 347.821 bits (891), Expect = 4.609e-95 Identity = 178/292 (60.96%), Postives = 225/292 (77.05%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 +I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D R L +GV V VGTPGRV D+++R +LR +++R+ VLDEADEMLS+GF DQIY+IF+ LP IQV +FSATMP E LE+T+KFM PVRILVKR+ LTLEGIKQF + VE EE KL+TL DLYET++I QSVIF NTRRKVDW+ +K+ +HTVS+ H +M ++ R+ +M FRSGSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIG Sbjct: 66 IIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQDDLRKLQAGVVVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIG 356
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 7.862e-95 Identity = 178/292 (60.96%), Postives = 225/292 (77.05%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 +I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D R L +GV V VGTPGRV D+++R +LR +++R+ VLDEADEMLS+GF DQIY+IF+ LP IQV +FSATMP E LE+T+KFM PVRILVKR+ LTLEGIKQF + VE EE KL+TL DLYET++I QSVIF NTRRKVDW+ +K+ +HTVS+ H +M ++ R+ +M FRSGSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIG Sbjct: 66 IIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIG 356
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 7.862e-95 Identity = 178/292 (60.96%), Postives = 225/292 (77.05%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 +I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D R L +GV V VGTPGRV D+++R +LR +++R+ VLDEADEMLS+GF DQIY+IF+ LP IQV +FSATMP E LE+T+KFM PVRILVKR+ LTLEGIKQF + VE EE KL+TL DLYET++I QSVIF NTRRKVDW+ +K+ +HTVS+ H +M ++ R+ +M FRSGSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIG Sbjct: 66 IIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIG 356
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 345.895 bits (886), Expect = 1.751e-94 Identity = 171/289 (59.17%), Postives = 218/289 (75.43%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKT+ + Q ++ + Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED + L GVH V GTPGRV+DM++R SL+ +++ VLDE+DEMLS+G KDQIYD+++ LP IQV + SAT+P E LE+T KFM PVRILVK DELTLEGIKQ++V+V+KEEWK +TLCDLY L I Q++IF NTR+KVDWLT+KMRS + VS+ HGD Q RD IM +FRS SRVLI +D+ ARGIDVQ VS VINYD+P PE Y+HRIG Sbjct: 62 VIAQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIG 350
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.483e-93 Identity = 174/292 (59.59%), Postives = 222/292 (76.03%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR--GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF G+LQ +D + QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++D +++ G V GTPGRV DM+++Q L+ N+++ VLDEADE+LS GFK QIYDIF LP QV V SATM + LE+TRKFMN PV+ILVKRDE++LEGIKQ+ VNV+KEEWK +TLCD+Y++L ITQ VIF NT++KVDWL+ ++ + V + HGDM Q RD +M +FR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIG Sbjct: 63 VIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIG 354
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.483e-93 Identity = 174/292 (59.59%), Postives = 222/292 (76.03%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR--GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF G+LQ +D + QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++D +++ G V GTPGRV DM+++Q L+ N+++ VLDEADE+LS GFK QIYDIF LP QV V SATM + LE+TRKFMN PV+ILVKRDE++LEGIKQ+ VNV+KEEWK +TLCD+Y++L ITQ VIF NT++KVDWL+ ++ + V + HGDM Q RD +M +FR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIG Sbjct: 63 VIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIG 354
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 2.529e-93 Identity = 175/292 (59.93%), Postives = 222/292 (76.03%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEML--SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF G+LQ +D + QALVL+PTRELA QI +V+ LGDY+ V+ +A GG ++++D R+ +G VV GTPGRV DM +R L N+++ +LDEADE+L S GFK QIYDIF LP QV V SATM + LE+T+KFM+ PV+ILVKRDE++LEGIKQ++VNVEKE+WK +TLCDLY++L ITQ VIF NT++KVDWL+ K+ + V + HGDM Q R+ +M +FRSG SRVLI+TD+ ARGIDVQQVSLVINYD+P ENY+HRIG Sbjct: 63 VIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYMNVQSYAMTGGKTMKDDLNRMQKNGCQVVSGTPGRVLDMFKRHLLNTRNVQMLILDEADELLGESLGFKQQIYDIFTKLPAACQVVVVSATMSKDILEVTKKFMSDPVKILVKRDEISLEGIKQYYVNVEKEDWKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEDRNKVMSDFRSGHSRVLISTDVWARGIDVQQVSLVINYDIPEIMENYIHRIG 354
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A_TRYBB (Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei GN=Tb09.160.3270 PE=3 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 2.796e-92 Identity = 174/293 (59.39%), Postives = 221/293 (75.43%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC----VGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 +I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L + VGGT V++D R L SG V VGTPGRV D+ +R ++R +++R+ VLDEADEMLS+GF +QIYDIF+ LP +IQV +FSATMP + LE+T+KFM P RILVKR+ LTLEGIKQF + VE EE KL+TL DLYET++I QSVIF NTRRKVDWL ++ S +HTVS H +M + R+ +M FR+GSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIG Sbjct: 66 IIAQAQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELAMQTAEVITRIGEFLAEGSSSFCATFVGGTRVQDDYRKLQSGTIVAVGTPGRVVDVTKRGAMRTESLRVLVLDEADEMLSQGFAEQIYDIFRFLPKEIQVALFSATMPDDVLELTKKFMRDPTRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWLASQLNSSNHTVSCMHSEMSKQEREKVMGTFRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIG 357
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A_TRYCR (Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi GN=Tc00.1047053511585.190 PE=3 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 2.216e-89 Identity = 169/293 (57.68%), Postives = 220/293 (75.09%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC----VGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 +I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L + VGGT V++D R L +G V VGTPGRV D+ +R ++R +++R+ VLDEADEMLS+GF +QIY+IF+ LP +IQV +FSATMP + LE+T+KFM P RILVKR+ LTLEGIKQ+ + VE EE KL+TL DLYET++I QSVIF NTRRKVDWL ++ +HTVS H +M + R+ +M FR+GSSRVL+TTDL+ARGIDV V++VIN+DLPT E+YLHRIG Sbjct: 66 IIAQAQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELALQTAEVITRIGEFLAEGNSSFCATFVGGTRVQDDYRKLQAGSIVAVGTPGRVVDVTKRGAMRTEHLRVLVLDEADEMLSQGFAEQIYEIFRYLPKEIQVALFSATMPDDVLELTKKFMRDPTRILVKRESLTLEGIKQYFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWLAQQLNQSNHTVSCMHSEMPKQDREKVMSTFRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKESYLHRIG 357
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A2_ORYSJ (Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica GN=Os02g0221300 PE=3 SV=2) HSP 1 Score: 311.612 bits (797), Expect = 3.661e-84 Identity = 170/290 (58.62%), Postives = 210/290 (72.41%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGI--KQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRI 866 +IQQ+ GT T T C GILQ+LDY ECQALVL PT +LA + + V+ LG +L K HA GGTS EDQ+ILS+GV V VGTP V ML+ ++L PD+IR+FVLDEADE+L RGFKDQI+ I Q LP K Q G FSA+M EALE+ RK+MNKPV I+V RDE LEGI KQF+VNVEKE+ KL+ LC L++T+ IT+S+IFVNTR LT+K+R + +TVSA HG + Q RD ++EF+SGSSR+LITTDL RGIDV + I YDLPTQP YL + Sbjct: 88 IIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFGFFSASMSHEALEMCRKYMNKPVEIIVPRDE-ELEGINVKQFYVNVEKEDCKLDKLCGLFDTMEITRSIIFVNTRHHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL--RGIDVLRAPAAIFYDLPTQPVCYLRHV 371 The following BLAST results are available for this feature:
BLAST of CK933138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933138 ID=CK933138; Name=CK933138; organism=Citrus sinensis; type=EST; length=870bpback to top |