CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK1_MYCPU (Lysyl-tRNA synthetase 1 OS=Mycoplasma pulmonis GN=lysS1 PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 4.170e-31 Identity = 72/200 (36.00%), Postives = 120/200 (60.00%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 ++E +R ++KK E L K + + ++ +S N++ E Y H + E + + F + ++D +G IQLY +K+ L ++ + +DIGDI+ V G++ +T KGEL++ VN F +LTK L PL +KYHGL DV++RYR+RY+D++S P + ++F R K++S+IRK + F+EVETP+L Sbjct: 9 EQEIIRREKLKKYESLGIKTFKKFDHEKINIYS-NEIVEKYNHFSKDELLEKQIKLIIAGRILTQRGPF-----IVIQDTNGKIQLYVDKKEL--EEQKETLALLDIGDIIYVKGTLMKTMKGELTIKVNFFDLLTKGLTPLAEKYHGLVDVEERYRKRYLDLISNPNIKEIFWTRTKVISKIRKFFDEQNFMEVETPML 200
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_DICNV (Lysyl-tRNA synthetase OS=Dichelobacter nodosus (strain VCS1703A) GN=lysS PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.113e-31 Identity = 79/201 (39.30%), Postives = 119/201 (59.20%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGT-IQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 D + A R +K++++R + TH A QL + H E + S+ V+ GK +F+ ++D SG IQLY + L + +++ K + D+GDI+ SGS+ RT+ GEL+V N+ +LTKSL PLPDK+HGLTD + RYRQRYVD++ + DVF+ R+KI+S IR E+ F+EVETP++ Sbjct: 9 DENKLIAERRQKLQKIRDTQKIAFPNDARPTHKAAQLHRDFDH--GDEAALSQAGTVAIAGRMMGKRVMGKASFVHVQDGSGEQIQLYVSSDALTEEVYEEFKTW-DVGDIIFASGSLFRTKTGELTVQTNAIRLLTKSLRPLPDKFHGLTDQEIRYRQRYVDLMVNAQSRDVFKARSKIISYIRHFFEARDFLEVETPMM 206
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BLOPB (Lysyl-tRNA synthetase OS=Blochmannia pennsylvanicus (strain BPEN) GN=lysS PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.290e-31 Identity = 74/193 (38.34%), Postives = 112/193 (58.03%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R KK+ +LR KG+ + + R +NQL + Y H +N E N V+ GK +F+T+RD G IQLY L ++ +D+ D+GDILG G + RT GELS+ +LTKSL PLPDK+HGL + + +YRQRY+D++ F+ R+ ++SEIR+ ++ F+EVETP++ Sbjct: 23 IRRKKLSKLREKGVA-FPNNFRRNSISNQLHKKYAHTSNVELIQL-NIEVTIAGRIISQRIMGKASFITIRDAEGCIQLYITSNSLATNLYDENIKQWDLGDILGARGILFRTRTGELSIYCKEIRLLTKSLRPLPDKFHGLNNQETKYRQRYLDLIINENTRKTFKIRSLVISEIRQFMKKNNFMEVETPMM 213
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ARCB4 (Lysyl-tRNA synthetase OS=Arcobacter butzleri (strain RM4018) GN=lysS PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.290e-31 Identity = 68/193 (35.23%), Postives = 116/193 (60.10%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQL-KVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 RI+K +LR G+ PY+ + R + ++ + + EE EN + + GK +FL + D+SG +Q+Y ++ L + ++++ K +++GDI+ +SG T GELS+ +S ILTK++ PLP+K+HG+ D + RYRQRY+D++ EV F R+K++S R+ E+ GF+EVETP++ Sbjct: 10 RIEKANKLREDGINPYSNESSRNCTISKYLNVNSDIFQLEEKRDENRNYTVAGRIKFFRLMGKASFLKIEDESGMLQIYVARDNLPENFYNEVFKKNIEVGDIIEISGYPFVTGHGELSLHADSLKILTKAISPLPEKFHGIQDKELRYRQRYLDLIMNSEVRKTFHIRSKVISLTRRFFENKGFLEVETPMM 202
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_EDWI9 (Lysyl-tRNA synthetase OS=Edwardsiella ictaluri (strain 93-146) GN=lysS PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.213e-30 Identity = 75/193 (38.86%), Postives = 119/193 (61.66%), Query Frame = 1 Query: 229 RIKKVEELRSKGLE-PYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R +K+ LR +G+ P ++ D T +++L +Y + EE + N VS GK +F+TL+D G IQLY ++ L D + + D+GDI+G G++ RT+ GELS+ +S +LTK+L PLPDK+HGL+D + RYRQRY+D+++ + FR R+KI++ IR + + GF+EVETP++ Sbjct: 22 RREKLAALRKEGIAFPNDFRRDTT--SDKLHSLYDGKSK-EELEALNVEVSVAGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLKDDVYSEQFKKWDLGDIIGARGTLFRTQTGELSIHCHSIHLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNKGFMEVETPMM 211
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK2_METMA (Lysyl-tRNA synthetase 2 OS=Methanosarcina mazei GN=lysS2 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.213e-30 Identity = 69/192 (35.94%), Postives = 111/192 (57.81%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 ++ K+ + S+GL PY YK+++ ++ E + E V GK+ F L D +G +Q+ K L ++F+ K VD GDI+GV G + RT++GE S+ V+ F +L+KSL LP+K+HGL DV+ RYR+RY+D++ E ++F R+K++SEIR+ + F+E ETP+L Sbjct: 32 KLAKLNGVISQGLNPYPYKFEKDEDICEILEKFEDFEKNEGLT-----VRTAGRLYNIRKHGKMIFADLGDQAGRVQVLVRKGNLPDEEFEIFKNLVDSGDIIGVQGDLFRTKRGENSISVSEFSLLSKSLCALPEKFHGLKDVETRYRKRYLDLIVNAEKREIFVMRSKLISEIRRFLTDREFLEFETPIL 218
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BURXL (Lysyl-tRNA synthetase OS=Burkholderia xenovorans (strain LB400) GN=lysS PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.585e-30 Identity = 79/200 (39.50%), Postives = 111/200 (55.50%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 D + A R +K+ ELR +G+ Y + TH A LQ Y H ++ E + V+ GK +F T+RD SG IQ + + + +D K + D+GDI+ G + RT KGELSV +L+KSL PLPDK+HGL+D + +YRQRYVD++ PE F R K +S IRK + F+EVETP+L Sbjct: 19 DDNKIIAERREKLRELREQGVA-YPNDFRPTHHAEDLQAQYEH-SDKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPADVGQETYDAFKKW-DMGDIVAARGVLFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMADADFMEVETPML 215
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_RALSO (Lysyl-tRNA synthetase OS=Ralstonia solanacearum GN=lysS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.070e-30 Identity = 77/200 (38.50%), Postives = 111/200 (55.50%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 D + A R +K+ LR +G+ Y + TH A L Y + + N V+ GK +F T++D SG IQ Y ++R+ D + K + D+GDI+ G + RT KGELSV V +L+KSL PLPDK+HGL D + +YRQRYVD++ PE + FR R K ++ +R + GF+EVETP+L Sbjct: 16 DDNQIMAERREKLAALRQQGVA-YPNDFCPTHHAADLHTRYSE-TDQPALEAANVEVALAGRMMLKRVMGKASFATVQDGSGQIQFYITRDRVGEDVYAAFKHW-DLGDIVAARGVLFRTNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRHHMSDAGFMEVETPML 212
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_RALME (Lysyl-tRNA synthetase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=lysS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.070e-30 Identity = 76/200 (38.00%), Postives = 111/200 (55.50%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 D + A R +K++ LR +G+ + + TH A L Y S + VS GK +F T++D SG IQ Y ++++ D + K + D+GDI+ G + RT KGELSV V +L+K+L PLPDK+HGL D + +YRQRYVD++ PE FR R + +S IR+ + GF+EVETP+L Sbjct: 20 DENKIIAERREKLQALRQQGVA-FPNDFQPTHQAGALHAQYGETDQATLEASPVE-VSIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDKVGEDVYAAFKHW-DLGDIISARGELFRTNKGELSVQVRELRLLSKALRPLPDKFHGLADQETKYRQRYVDLIVSPETRSTFRARTQAISSIRRHMADAGFMEVETPML 216
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_CITK8 (Lysyl-tRNA synthetase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lysS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.070e-30 Identity = 74/192 (38.54%), Postives = 116/192 (60.42%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R +K+ LR +G+ P+ + R H+++QL + N EE + N VS GK +F+TL+D G IQLY ++ L +++ D+GDILG G + +T+ GELS+ +LTK+L PLPDK+HGL D + RYRQRY+D++S E + F+ R++I++ IR+ + GF+EVETP++ Sbjct: 22 RREKLASLREQGI-PFPNDFRRDHTSDQLHADFDAKEN-EELEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETPMM 211 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |