CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_PROM4 (Lysyl-tRNA synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=lysS PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.419e-40 Identity = 93/205 (45.37%), Postives = 129/205 (62.93%), Query Frame = 1 Query: 217 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLS----DQ-----FDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 ++ R++K + L+ G PY +++ TH A LQ ++ LANG+E E V GKLAF TL D+SG+IQL+ EK L DQ F QL VD GD +GV+G ++RT++GELS+ V S+ +L KSL PLPDK+HGL+DV+KRYRQRYVD++ P+ FR RA +VS IR+ ++ F+E+ETPVL Sbjct: 4 LKETRLEKAQVLKKLGNGPYGIRFEVTHKAAVLQVEHQDLANGQERQLE---VCVAGRVISRRVMGKLAFFTLSDESGSIQLFLEKATLEEHSDLDQESPGSFSQLTDLVDSGDWIGVNGILRRTDRGELSIKVFSWTMLCKSLQPLPDKWHGLSDVEKRYRQRYVDLIVNPQSRKTFRSRALMVSAIRRWLDERDFLEIETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_PROM9 (Lysyl-tRNA synthetase OS=Prochlorococcus marinus (strain MIT 9312) GN=lysS PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.383e-40 Identity = 88/205 (42.93%), Postives = 130/205 (63.41%), Query Frame = 1 Query: 217 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEK---------ERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R R++K L SKG YA + +H+ L + + +L NG+E E+ VS GK+AF T+ D G IQLY +K ++LLS F+ +K VDIGD +GV G++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D++ P +VF+ RAK +S IR+ +++ F+E+ETP+L Sbjct: 4 IREARLQKANSLVSKGFASYAESFSVSHTTKFLIQKFDYLENGQE---EDFSVSLAGRVMAKRVMGKIAFFTISDQEGQIQLYLDKRMINCNLENQKLLS--FEDIKEIVDIGDWIGVYGTIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKTRAKCISFIRQWLDNRNFLEIETPIL 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_PROM2 (Lysyl-tRNA synthetase OS=Prochlorococcus marinus (strain MIT 9215) GN=lysS PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.868e-39 Identity = 87/205 (42.44%), Postives = 131/205 (63.90%), Query Frame = 1 Query: 217 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYC---------EKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 ++ R++K L SKG YA + +++ + L + + +L NG+E++ VS GK+AF T+ D G IQLY EK++LLS F+ +K VDIGD +GV G++K+T KGELS+ V + +L+KSL PLPDK+HGLTD++KRYRQRY+D++ P +VF+ RAK +S IRK +++ F+E+ETP+L Sbjct: 4 IKEARLQKARSLVSKGFASYAQSFKVSNTTSFLLQEFDYLENGQEADFS---VSVAGRVLAKRVMGKIAFFTISDQEGQIQLYLDKRIINLNLEKQKLLS--FEDIKEIVDIGDWIGVYGTIKKTNKGELSIKVEKWEMLSKSLQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKTRAKCISFIRKWLDNRNFLEIETPIL 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ENTFA (Lysyl-tRNA synthetase OS=Enterococcus faecalis GN=lysS PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.434e-39 Identity = 82/193 (42.49%), Postives = 126/193 (65.28%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+E LR +G++P+ ++DRTH++ +L E Y + EE + N VS GK F L+D G IQ+Y K+++ + ++ K D+GD GV+G + +T GE++V + +LTK+L PLPDKYHGLT+V++RYRQRY+D++S E D F KR++I+SEIR+ ++ G+VEVETPVL Sbjct: 18 VRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTK-EELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFK-HADLGDFFGVTGQVMKTNTGEVTVKAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVL 208
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ANASK (Lysyl-tRNA synthetase OS=Anaeromyxobacter sp. (strain K) GN=lysS PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.025e-37 Identity = 88/202 (43.56%), Postives = 127/202 (62.87%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLAN--GEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +RE + A R+KK E LR+ G+ P+ W H A+ E+ RH + EE + S FGK AFL +RD S +Q++ +K+R+ F+ K+ +DIGDI+G G RT+ GEL++ +F ILTK+ PLP+K+HGLTDV++RYRQRYVD+V P V + F KRA+IVS IR+ +++ G++EVETP L Sbjct: 9 EREII-AQRLKKAEALRALGVNPFGNGWQPRHLAD---ELLRHYGDQPAEEIAKDPGDWSLAGRVLAVRSFGKAAFLRVRDRSAELQVWVKKDRVGEQAFEVFKL-LDIGDIVGAEGPATRTKTGELTLEARTFTILTKATRPLPEKWHGLTDVEQRYRQRYVDLVVTPGVREAFVKRARIVSGIRRFLDARGYLEVETPTL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ANAD2 (Lysyl-tRNA synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=lysS PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.025e-37 Identity = 88/202 (43.56%), Postives = 127/202 (62.87%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLAN--GEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +RE + A R+KK E LR+ G+ P+ W H A+ E+ RH + EE + S FGK AFL +RD S +Q++ +K+R+ F+ K+ +DIGDI+G G RT+ GEL++ +F ILTK+ PLP+K+HGLTDV++RYRQRYVD+V P V + F KRA+IVS IR+ +++ G++EVETP L Sbjct: 9 EREII-AQRLKKAEALRALGVNPFGNGWQPRHLAD---ELLRHYGDQPAEEIAKDPGDWSLAGRVLAVRSFGKAAFLRVRDRSAELQVWVKKDRVGEQAFEVFKL-LDIGDIVGAEGPATRTKTGELTLEARTFTILTKATRPLPEKWHGLTDVEQRYRQRYVDLVVTPGVREAFVKRARIVSGIRRFLDARGYLEVETPTL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_CARHZ (Lysyl-tRNA synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=lysS PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.338e-37 Identity = 83/195 (42.56%), Postives = 127/195 (65.13%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R++K+ ELR G+EPY K++RTH+A ++ + + L + V GK +F ++D SG IQ+Y + L D + K+F +DIGDI+GV+G + +T+KGE++V ++SF IL KSL PLP+K+HGLTDV+ RYRQRYVD++ PEV + F R++IV IR+ ++ GF+EVETP++ Sbjct: 12 VRLEKLSELRKMGIEPYGGKFERTHTAKEILDNFEQLVDKT--------VKIAGRIMAKRGHGKASFAHIQDMSGKIQIYARQNELGIDAY---KLFEKLDIGDIIGVTGHVFKTQKGEITVWLSSFEILAKSLRPLPEKWHGLTDVELRYRQRYVDLIVNPEVRETFILRSRIVKTIREFLDQKGFLEVETPMM 195
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACST (Lysyl-tRNA synthetase OS=Bacillus stearothermophilus GN=lysS PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.982e-37 Identity = 79/200 (39.50%), Postives = 130/200 (65.00%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 D+ VR ++KK+EEL G++P+ +++RTH A +L E+Y L+ EE + V+ GK F ++D +G IQ+Y ++ + Q++ K+ D+GDI+GV G+M +T+ GELS+ V+S+ LTK+L PLP+KYHGL D+++RYRQRY+D++ PE F R+ I+ +R+ ++S G++EVETP++ Sbjct: 8 DQLRVRREKLKKIEEL---GVDPFGKRFERTHKAEELFELYGDLSK-EELEEQQIEVAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKIS-DLGDIVGVRGTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSHGYLEVETPMM 202
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ANADE (Lysyl-tRNA synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=lysS PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.982e-37 Identity = 88/202 (43.56%), Postives = 126/202 (62.38%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLAN--GEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +RE + A R+KK E LR+ G+ P+ W H A +E+ RH + EE S FGK AFL +RD S +Q++ +K+R+ F+ K+ +DIGDI+G G RT+ GEL++ +F ILTK+ PLP+K+HGLTDV++RYRQRYVD+V P V + F KRA+IVS IR+ +++ G++EVETP L Sbjct: 9 EREII-AQRLKKAEALRALGVNPFGNGWQPRHLA---EELLRHHGDQPAEEIAKAPGDWSLAGRVLAVRSFGKAAFLRVRDRSAELQVWVKKDRVGDQAFEVFKL-LDIGDIVGAEGPATRTKTGELTLEARTFTILTKATRPLPEKWHGLTDVEQRYRQRYVDLVVTPGVREAFVKRARIVSGIRRFLDARGYLEVETPTL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAS1 (Lysyl-tRNA synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=lysS PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.643e-37 Identity = 81/194 (41.75%), Postives = 119/194 (61.34%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE-ESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DRT A L E + + E E HVS GK F ++D SG IQ+Y K+++ DQF + D+GDI+GV G M +T GELSV SF +LTK+L PLPDK+HGL D+++RYRQRY+D+++ + F KR+KI+ E+R + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGQKFDRTSMATPLHEDWDQFSKEELHEKEEESHVSIAGRLMTKRGKGKAGFAHVQDLSGQIQIYVRKDQVGEDQF-AIWNSADLGDIVGVEGVMFKTNTGELSVKAQSFTLLTKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFIKRSKILQEMRNYLNQQGFLEVETPMM 203 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |