CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_PEDPA (Lysyl-tRNA synthetase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=lysS PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.643e-37 Identity = 83/195 (42.56%), Postives = 124/195 (63.59%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFV--DIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++ELR KG++P+ ++++RTH A QL E Y + EE + + + GK+ F L+D SG +QLY K+ L D + KVF DIGD LGV+G + +T+ GEL++ V L+K+L PLPDK+HGL +V++ YRQRY+D+++ + D FRKR KIVS +R+ ++ F EVETPVL Sbjct: 15 VRREKMQELRDKGIDPFGHRFERTHLAAQLHEKYSDMTK-EELDEQGVVATIAGRMISKRGKGKVGFADLKDRSGKMQLYVRKDVLGEDVY---KVFKRSDIGDFLGVTGDVMKTDMGELTIKVTGLTFLSKALRPLPDKFHGLQNVEQIYRQRYLDLIANDDSMDRFRKRTKIVSAVRRYLDGNDFAEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_SYNWW (Lysyl-tRNA synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=lysS PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.480e-36 Identity = 78/196 (39.80%), Postives = 124/196 (63.27%), Query Frame = 1 Query: 217 VRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 ++ +R++K+ EL+ G+EP+ +++R A ++E + L E ++ GK F L D SG+IQLY ++ L ++++ K +DIGDILG+ G + RT+KGE+S+ V L+KSL PLP+K+HGL DV+ RYRQRYVD++ PEV +VF KR++I+ E+R ++ GF+EVETP++ Sbjct: 11 LKKVRLEKLAELKEMGIEPFGRRFERDSMAQNIKEAFSEL--------EGKTIAIAGRIMSKRRHGKAGFANLADLSGSIQLYFRQDDLGPEKYELYKK-LDIGDILGIQGEVFRTQKGEISIHVRDLYYLSKSLTPLPEKWHGLKDVELRYRQRYVDLIVNPEVKEVFVKRSRIIKEMRNYLDDRGFLEVETPMM 197
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAES (Lysyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=lysS PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.297e-36 Identity = 75/194 (38.66%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ ++++R+ ++++L+E + + E E++ HVS GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+SV SF +L+KSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + GF+EVETP++ Sbjct: 11 VRRQKLQELIDLGIDPFGHRFNRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTKRGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEISVKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAEQ (Lysyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=lysS PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.297e-36 Identity = 75/194 (38.66%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ ++++R+ ++++L+E + + E E++ HVS GK F ++D G IQ+Y K+++ DQF+ K+ D+GDI+GV G M +T GE+SV SF +L+KSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + GF+EVETP++ Sbjct: 11 VRRQKLQELIDLGIDPFGHRFNRSSTSSELKEQWDQFSKEELHEKEDESHVSIAGRLMTKRGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM-ADLGDIIGVEGVMFKTNTGEISVKAKSFTLLSKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACHD (Lysyl-tRNA synthetase OS=Bacillus halodurans GN=lysS PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.306e-36 Identity = 81/194 (41.75%), Postives = 120/194 (61.86%), Query Frame = 1 Query: 223 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 A+R +K++ L ++G P+ K++RT +A ++E Y + EE E V GK F ++D +G IQ+Y K+ + +D L +DIGDI+GV G +T+ GELSV V F +LTKSL PLPDKYHGL DV++RYRQRY+D++ PEV D F R+KI+ +R+ ++ G++EVETP + Sbjct: 12 AVRREKLQNLEAEGANPFGGKFERTDTAQSMKEKY-DAKSKEELEEETHEVVLAGRVMTKRGKGKAGFAHIQDLTGQIQIYVRKDAVGDKSYD-LFTSIDIGDIVGVKGVAFKTKVGELSVKVQDFQLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLIVNPEVRDTFVLRSKILQSMRRYLDDRGYLEVETPTM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACCN (Lysyl-tRNA synthetase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=lysS PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.306e-36 Identity = 73/193 (37.82%), Postives = 123/193 (63.73%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ LR +G++P+ +++RTHS+ +L +Y + EE + VS GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV SF +LTKSL PLPDKYHGL D+++RYRQRY+D+++ E + F R+KI+ E+R+ ++ G++EVETP++ Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTHSSKELLNLYGEFSK-EELEEKAISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATSFTLLTKSLRPLPDKYHGLKDIEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_THEMA (Lysyl-tRNA synthetase OS=Thermotoga maritima GN=lysS PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.623e-36 Identity = 76/192 (39.58%), Postives = 122/192 (63.54%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+K+++ELRS G+EPY YK+++ +A +++E Y +L GE SE +S GK AF ++DD+G IQ Y + + + ++ D K V IGD +GV G +++ GEL++ V + +L+K+L PLP+K+HG+ D + YRQRY++++ E + F+KR K V IR+ + S GF+EVETP+L Sbjct: 9 RLKEIQELRSMGIEPYPYKFEKELTAREIREKYDYLQAGEVLESEK--LSFAGRVMSIRHHGKTAFFHMKDDTGRIQAYIKADSVGKEKMDLFKRHVKIGDFVGVRGFPFKSKTGELTIYVQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLELIVNDEAIERFKKRFKAVRVIREFLNSRGFIEVETPIL 198
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_THESQ (Lysyl-tRNA synthetase OS=Thermotoga sp. (strain RQ2) GN=lysS PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.344e-36 Identity = 76/192 (39.58%), Postives = 120/192 (62.50%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+ +++ELRS G+EPY YK+++ +A +++E Y +L GE SE +S GK AF ++DD+G IQ Y + + ++ D K V IGD +GV G +++ GEL++ V + +L+K+L PLP+K+HG+ D + YRQRY++++ E + FRKR K V IR+ + S GF+EVETP+L Sbjct: 9 RLNEIQELRSMGIEPYPYKFEKELTAREIREKYDYLQAGEVLESEK--LSFAGRVMSIRHHGKTAFFHMKDDTGRIQAYVRADSVGKEKMDLFKRHVKIGDFIGVRGFPFKSKTGELTIYVQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLNSRGFIEVETPIL 198
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_THEP1 (Lysyl-tRNA synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=lysS PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.344e-36 Identity = 76/192 (39.58%), Postives = 120/192 (62.50%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+ +++ELRS G+EPY YK+++ +A +++E Y +L GE SE +S GK AF ++DD+G IQ Y + + ++ D K V IGD +GV G +++ GEL++ V + +L+K+L PLP+K+HG+ D + YRQRY++++ E + FRKR K V IR+ + S GF+EVETP+L Sbjct: 9 RLNEIQELRSMGIEPYPYKFEKELTAREIREKYDYLQAGEVLESEK--LSFAGRVMSIRHHGKTAFFHMKDDTGRIQAYVRADSVGKEKMDLFKRHVKIGDFIGVRGFPFKSKTGELTIYVQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLNSRGFIEVETPIL 198
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_FERNB (Lysyl-tRNA synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=lysS PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.344e-36 Identity = 75/195 (38.46%), Postives = 120/195 (61.54%), Query Frame = 1 Query: 220 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R RIK+++ELR+ G+ PY Y +++TH+ +++ + HL+NGE ++ VS GK AF ++D G IQ Y K++ ++ ++ K V +GDI+GV G + ++ GE+++LV F +L K L P+P+K+HG+ D + YRQRYVDM++ E FR R+ I+ IR+ + GF EVETP+L Sbjct: 6 REARIKEIDELRNLGINPYPYSYNKTHTTEDIKKQFEHLSNGEVTDKR---VSTAGRIMSIREHGKSAFFHIKDTYGRIQAYIRKDK--TENYEFFKERVTVGDIVGVEGIVFKSNTGEITILVEKFELLVKPLRPMPEKWHGIKDKEVLYRQRYVDMIANDETIKRFRMRSDIIRMIREFLTKKGFFEVETPIL 195 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |