CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_SHEWM (Lysyl-tRNA synthetase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=lysS PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.449e-24 Identity = 71/203 (34.98%), Postives = 109/203 (53.69%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSK-GLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVF--VDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 D + A R K+E +R+ + +DR H A +Q + G + E + + + FL ++D SG IQ Y K+ Q D F +DIGDI+GV+G + + KG+L V + + +LTK+L PLP+K+HGLTD + RYRQRYVD++ + + F R+K+VS IR + F+EVETP++ Sbjct: 8 DENKLIAERRAKLEHIRANCPANGHPNNFDRKHKAADIQAEF-----GNNTKEELEGMGIQRSIAGRIMAKRGPFLVIQDVSGRIQAYAGKDV----QKDLKATFQGLDIGDIIGVTGQLHLSGKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVSAIRNFMVKKEFMEVETPMM 201
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MYCMO (Lysyl-tRNA synthetase OS=Mycoplasma mobile GN=lysS PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.100e-23 Identity = 63/193 (32.64%), Postives = 110/193 (56.99%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+E+L+ G+E + + N++ + Y + E + E + + +FL L+ Q+Y + L ++ +L +DIGDI+ V+G + +T+ GEL++ N +L+KSL LPDK+HGL D+++RYR RYVD++ +V F R++I+S IRK ++L ++EV+TPVL Sbjct: 11 IRRQKIEKLQKLGVEVFHETVKFDLNINKIIQKYNSFSKDELAKDEFSLSTTGRIITI-----RSSFLVLKSQGSKFQIYLPIKEL-DKKYLELIDLLDIGDIIFVNGKLMKTQTGELTLRANELKLLSKSLKVLPDKFHGLNDIEERYRHRYVDLIVNDDVRKTFLLRSRIISLIRKYFDNLEYLEVDTPVL 197
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_SULSO (Lysyl-tRNA synthetase OS=Sulfolobus solfataricus GN=lysS PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.437e-23 Identity = 65/192 (33.85%), Postives = 104/192 (54.17%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+K VEELR G+EPY +K++ TH ++ I + N + ++S GK +F+ + D+ +QLY + L +++D+ ++V GDI+GV G + T KGELS+LV + +L+K+L+ PD + RY RYVD + R I+ EIR+ + S GF+EVETP++ Sbjct: 9 RVKIVEELRKNGIEPYPHKYEVTHLIKDIKLIAKSQGN-KSHEPFMFNISTAGRVANIRRHGKASFVDIFDEGEKLQLYMRVDEL-KEKYDKFFIYVGRGDIIGVKGDLFYTMKGELSLLVKDYQLLSKALIEPPD--WSKLSPEFRYAHRYVDFLYNDNARKAMEIRYTIIREIREFLYSKGFIEVETPIV 196
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ONYPE (Lysyl-tRNA synthetase OS=Onion yellows phytoplasma GN=lysS PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.437e-23 Identity = 64/193 (33.16%), Postives = 107/193 (55.44%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ EL+ ++P+ K+ +HS Q+ Y+ A+ HV GK FL L+D + +Q Y + + + D F Q+ D+GDI+G+ G + +T+ EL++ F+ LTK+L PLPDK+HGL + ++ + RYVD++ + VF R+ I+ IR ++ GF+EVETP+L Sbjct: 11 IRHQKMNELKKINIDPFGKKFVPSHSIEQILLQYQK-ADSLALEQSQIHVCVAGRIVLKRGQGKAGFLHLQDFNFRMQAYIKLDLVGKDAF-QIYQNCDLGDIIGIKGFLFKTKTQELTIKALEFIHLTKALKPLPDKFHGLQNREEMRKNRYVDLIVNEKTRQVFLTRSLIMKYIRNFFDNQGFLEVETPIL 201
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BUCBP (Lysyl-tRNA synthetase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=lysS PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.437e-23 Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 412 GKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 GK +F L+D G IQLY ++ + + Q D+GDILG G + +T GELS+ +LTK+L PLP K+HGL+D + RYRQRY+D++S + +F+ R+ I IRK + F+EVETP++ Sbjct: 68 GKSSFFILKDFEGEIQLYIQENLFALNFYKQFVKKWDLGDILGAKGKLFKTRTGELSIHCTEIKLLTKALKPLPSKFHGLSDQETRYRQRYLDLISNRTLCSIFKIRSLIFINIRKYMLKKKFLEVETPMM 198
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_PHOPR (Lysyl-tRNA synthetase OS=Photobacterium profundum GN=lysS PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.876e-23 Identity = 56/129 (43.41%), Postives = 87/129 (67.44%), Query Frame = 1 Query: 424 FLTLRDDSGTIQLYCEK--ERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 FL ++D SG IQ Y +K ++ L +++ L DIGDI+GV G + + KG+L V ++++ +LTK+L PLP+K+HGLTD + RYRQRYVD++ + + R+K+VS IR + F+EVETP++ Sbjct: 76 FLAIQDVSGRIQAYADKTVQKELKEKYSGL----DIGDIIGVKGQLHLSGKGDLYVTMDNYELLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNTMIMRSKVVSAIRNFMMKKDFMEVETPMM 200
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MYCFE (Lysyl-tRNA synthetase OS=Mycoplasma fermentans GN=lysS PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.876e-23 Identity = 67/196 (34.18%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPY--AYKWDRTHSANQLQEIYRHLANGE-ESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R K+E + + P+ AY + ++++L + Y A E E+ ++S + FL L+D GTIQ+Y K+ + + ++ D+GDIL V G + +T E++V +LTK+L PLPDK+HGLTD ++RYR RY+D+++ PE + F R KIV IR L ++E ETP L Sbjct: 10 IRRDKLEFYKKFDVVPFKKAYGLGKLSTSDELNKKYGQFAREELEAKKVKKNISGRLIT------ARGPFLVLKDRKGTIQVYFNKKE--NPELTKIVETFDLGDILWVRGLLMKTHTCEMTVRAQDIQLLTKALKPLPDKFHGLTDTEERYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPFL 197
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_CHLCH (Lysyl-tRNA synthetase OS=Chlorobium chlorochromatii (strain CaD3) GN=lysS PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.200e-23 Identity = 69/204 (33.82%), Postives = 107/204 (52.45%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTH-SANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDK-----------YHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 RI++ + L G+ PY ++ TH SA L E + V+ GK +F ++D +G IQ+Y +K+ + ++ K+ +DIGDI+GV+G RT+ GE+S+ S +LTKSL P+P + +D + RYRQRYVD++ PEV + F KR IV+ +R G++EVETP+L Sbjct: 27 RIEERQHLIDSGINPYPCSFNVTHHSATILTEF---------QDEAKTPVAVAGRIMTIRKMGKASFFNVQDSAGRIQIYLKKDDVGEAAYNMFKL-LDIGDIVGVTGYTFRTKTGEISIHAESLELLTKSLRPIPIAKEKEVDGEKVVFDAFSDKELRYRQRYVDLIVNPEVRETFIKRTAIVAAMRNFFARHGWLEVETPIL 220
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MYCHJ (Lysyl-tRNA synthetase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=lysS PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.180e-23 Identity = 55/116 (47.41%), Postives = 83/116 (71.55%), Query Frame = 1 Query: 457 QLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 Q Y KE ++F + +D+GDI+ VSG + +T+ G+LS+ VN+F +LTKSL PLPD+Y+G+ + D++YR+RY+D++ E A FR R+KI+S IR +S GF+EV+TPVL Sbjct: 84 QAYISKEFQKKNEF--IFANLDLGDIIEVSGYLFKTQTGQLSIKVNNFSLLTKSLHPLPDQYYGIENPDEKYRKRYLDLLVNSESAKTFRLRSKIISLIRTFFDSQGFLEVDTPVL 197
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MYCH7 (Lysyl-tRNA synthetase OS=Mycoplasma hyopneumoniae (strain 7448) GN=lysS PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.180e-23 Identity = 55/117 (47.01%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 454 IQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 IQ Y K+ ++F + +D+GDI+ VSG + +T+ G+LS+ VN+F +LTKSL PLPD+Y+G+ + D++YR+RY+D++ E A FR R+KI+S IR +S GF+EV+TPVL Sbjct: 83 IQAYISKKFQKKNEF--IFANLDLGDIIEVSGYLFKTQTGQLSIKVNNFSLLTKSLHPLPDQYYGIENPDEKYRKRYLDLLVNSESAKTFRLRSKIISLIRTFFDSQGFLEVDTPVL 197 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |