CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_OCEIH (Lysyl-tRNA synthetase OS=Oceanobacillus iheyensis GN=lysS PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36 Identity = 79/193 (40.93%), Postives = 117/193 (60.62%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R K+ E KGL+P+ K++R+H A L E Y + EE D V+ GK F ++D SG IQLY K+ + D ++ K D+GDI+GV+G M +T GE+SV F +LTKSL PLP+KYHGL D+++RYRQRY+D+++ P+ F R+KI+ +R+ + GF+EVETP++ Sbjct: 11 VRRDKLAEHMEKGLDPFGGKFERSHQATDLIEKYDSYSK-EELEETTDEVTIAGRLMTKRGKGKAGFAHIQDLSGQIQLYVRKDMIGDDAYEVFKS-ADLGDIVGVTGVMFKTNVGEISVKAKQFQLLTKSLRPLPEKYHGLKDIEQRYRQRYLDLITNPDSRGTFVSRSKIIQSMREYLNGQGFLEVETPMM 201
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAW (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain MW2) GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAU (Lysyl-tRNA synthetase OS=Staphylococcus aureus GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAS (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain MSSA476) GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAR (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain MRSA252) GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAN (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain N315) GN=lysS PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAM (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=lysS PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAC (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain COL) GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAB (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAA8 (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |