CK933146

Overview
NameCK933146
Unique NameCK933146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_OCEIH (Lysyl-tRNA synthetase OS=Oceanobacillus iheyensis GN=lysS PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36
Identity = 79/193 (40.93%), Postives = 117/193 (60.62%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R  K+ E   KGL+P+  K++R+H A  L E Y   +  EE     D V+           GK  F  ++D SG IQLY  K+ +  D ++  K   D+GDI+GV+G M +T  GE+SV    F +LTKSL PLP+KYHGL D+++RYRQRY+D+++ P+    F  R+KI+  +R+ +   GF+EVETP++
Sbjct:   11 VRRDKLAEHMEKGLDPFGGKFERSHQATDLIEKYDSYSK-EELEETTDEVTIAGRLMTKRGKGKAGFAHIQDLSGQIQLYVRKDMIGDDAYEVFKS-ADLGDIVGVTGVMFKTNVGEISVKAKQFQLLTKSLRPLPEKYHGLKDIEQRYRQRYLDLITNPDSRGTFVSRSKIIQSMREYLNGQGFLEVETPMM 201          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAW (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain MW2) GN=lysS PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K++EL   G++P+  K+DR+  ++ L+E +   +  E    E D HV+           GK  F  ++D +G IQ+Y  K+++  D+FD  K   D+GDI+GV G M +T  GELSV    F +LTKSL PLPDK+HGL D+++RYRQRY+D+++  +    F  R+KI+ E+R  + + GF+EVETP++
Sbjct:   11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAU (Lysyl-tRNA synthetase OS=Staphylococcus aureus GN=lysS PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K++EL   G++P+  K+DR+  ++ L+E +   +  E    E D HV+           GK  F  ++D +G IQ+Y  K+++  D+FD  K   D+GDI+GV G M +T  GELSV    F +LTKSL PLPDK+HGL D+++RYRQRY+D+++  +    F  R+KI+ E+R  + + GF+EVETP++
Sbjct:   11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAS (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain MSSA476) GN=lysS PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K++EL   G++P+  K+DR+  ++ L+E +   +  E    E D HV+           GK  F  ++D +G IQ+Y  K+++  D+FD  K   D+GDI+GV G M +T  GELSV    F +LTKSL PLPDK+HGL D+++RYRQRY+D+++  +    F  R+KI+ E+R  + + GF+EVETP++
Sbjct:   11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAR (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain MRSA252) GN=lysS PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K++EL   G++P+  K+DR+  ++ L+E +   +  E    E D HV+           GK  F  ++D +G IQ+Y  K+++  D+FD  K   D+GDI+GV G M +T  GELSV    F +LTKSL PLPDK+HGL D+++RYRQRY+D+++  +    F  R+KI+ E+R  + + GF+EVETP++
Sbjct:   11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAN (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain N315) GN=lysS PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K++EL   G++P+  K+DR+  ++ L+E +   +  E    E D HV+           GK  F  ++D +G IQ+Y  K+++  D+FD  K   D+GDI+GV G M +T  GELSV    F +LTKSL PLPDK+HGL D+++RYRQRY+D+++  +    F  R+KI+ E+R  + + GF+EVETP++
Sbjct:   11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAM (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=lysS PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K++EL   G++P+  K+DR+  ++ L+E +   +  E    E D HV+           GK  F  ++D +G IQ+Y  K+++  D+FD  K   D+GDI+GV G M +T  GELSV    F +LTKSL PLPDK+HGL D+++RYRQRY+D+++  +    F  R+KI+ E+R  + + GF+EVETP++
Sbjct:   11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAC (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain COL) GN=lysS PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K++EL   G++P+  K+DR+  ++ L+E +   +  E    E D HV+           GK  F  ++D +G IQ+Y  K+++  D+FD  K   D+GDI+GV G M +T  GELSV    F +LTKSL PLPDK+HGL D+++RYRQRY+D+++  +    F  R+KI+ E+R  + + GF+EVETP++
Sbjct:   11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAAB (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=lysS PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K++EL   G++P+  K+DR+  ++ L+E +   +  E    E D HV+           GK  F  ++D +G IQ+Y  K+++  D+FD  K   D+GDI+GV G M +T  GELSV    F +LTKSL PLPDK+HGL D+++RYRQRY+D+++  +    F  R+KI+ E+R  + + GF+EVETP++
Sbjct:   11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAA8 (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=lysS PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K++EL   G++P+  K+DR+  ++ L+E +   +  E    E D HV+           GK  F  ++D +G IQ+Y  K+++  D+FD  K   D+GDI+GV G M +T  GELSV    F +LTKSL PLPDK+HGL D+++RYRQRY+D+++  +    F  R+KI+ E+R  + + GF+EVETP++
Sbjct:   11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203          
The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
SYK_OCEIH9.592e-3640.93Lysyl-tRNA synthetase OS=Oceanobacillus iheyensis ... [more]
SYK_STAAW1.636e-3540.21Lysyl-tRNA synthetase OS=Staphylococcus aureus (st... [more]
SYK_STAAU1.636e-3540.21Lysyl-tRNA synthetase OS=Staphylococcus aureus GN=... [more]
SYK_STAAS1.636e-3540.21Lysyl-tRNA synthetase OS=Staphylococcus aureus (st... [more]
SYK_STAAR1.636e-3540.21Lysyl-tRNA synthetase OS=Staphylococcus aureus (st... [more]
SYK_STAAN1.636e-3540.21Lysyl-tRNA synthetase OS=Staphylococcus aureus (st... [more]
SYK_STAAM1.636e-3540.21Lysyl-tRNA synthetase OS=Staphylococcus aureus (st... [more]
SYK_STAAC1.636e-3540.21Lysyl-tRNA synthetase OS=Staphylococcus aureus (st... [more]
SYK_STAAB1.636e-3540.21Lysyl-tRNA synthetase OS=Staphylococcus aureus (st... [more]
SYK_STAA81.636e-3540.21Lysyl-tRNA synthetase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_A08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bp
GGGGGAGTGGAGTGAAAATCAGAGAAAACAAAGATGGAGGCTTTGAAGTT
GTGGAGTACTCTATCCTCTCTACCAATCAGCTTCCGACACGTCATCCGCC
GGCGAACCTCTTTGACGTTTGTCCGCTGTCGCTCTTCCACTTCTATCACC
GTTTCCGCCGGCACTAGAAACCGTCGTGCTTCATCTTCTTCTACCTCCAC
TTCTGACCGCGAGGCCGTTCGTGCCCTGCGCATTAAGAAGGTAGAAGAAT
TGAGGAGCAAAGGGTTGGAGCCCTATGCATATAAGTGGGATAGGACGCAT
TCTGCAAATCAGCTACAAGAGATATATAGGCATTTAGCAAATGGTGAAGA
GTCGAATAGTGAGAATGATCATGTATCTGTAGCTGGGAGAGTTGTTGCTC
GTAGAGCATTTGGGAAGCTTGCATTTTTGACACTAAGAGATGACTCGGGT
ACGATACAGCTTTACTGCGAGAAGGAAAGGCTTTTAAGTGATCAGTTTGA
TCAGTTAAAGGTATTTGTTGATATTGGTGATATACTGGGTGTTAGTGGCT
CAATGAAACGGACAGAAAAAGGTGAGCTTTCTGTTCTTGTCAATTCATTC
GTGATTCTGACAAAATCTCTACTTCCGCTACCAGACAAATATCATGGTTT
AACTGATGTGGATAAACGTTACCGCCAAAGGTACGTAGATATGGTTTCAA
AACCTGAAGTAGCTGATGTATTCCGGAAAAGAGCAAAGATTGTTTCAGAG
ATACGCAAGACAGTGGAGTCTTTGGGTTTTGTTGAAGTTGAAACTCCAGT
TCTGCA
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