CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_CHLTA (Lysyl-tRNA synthetase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=lysS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.539e-22 Identity = 69/209 (33.01%), Postives = 111/209 (53.11%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSE------NDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKE-----RLLSD------QFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R K++E+R G+ PY Y++ ++QEI + E +SE V GK +F + D+ IQ+ ++ L +D +F + K+ D+GDILG+ G + T GEL+VLV + +L KSL+ LPDK+ GL D + RYR+R+ D++S +V F R++I+ IR+ ++ F+EVETP+L Sbjct: 16 RTSKLKEIRDLGINPYPYQYT---DCLEVQEIRNQFVDNELGDSEAAFRKETPKVRFAGRLVLFRSMGKNSFGQILDNDAKIQVMFNRDFSAVAGLAADAGISPIKFIEKKL--DLGDILGLEGYLFFTHSGELTVLVETVTLLCKSLISLPDKHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPIL 219
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MYCTA (Lysyl-tRNA synthetase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=lysS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 68/194 (35.05%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGT-IQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R K L ++G +PY RTH+ +++ + L + D V GKL F TL+D GT +Q+ +++ D K VD+GDI+ V G++ + +GELSVL + + I KSL PLP + +++ + R RQRYVD++ +PE V R R +V IR ++ GF+EVETPVL Sbjct: 16 IRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPI---DTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSE-ESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MYCBT (Lysyl-tRNA synthetase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=lysS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 68/194 (35.05%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGT-IQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R K L ++G +PY RTH+ +++ + L + D V GKL F TL+D GT +Q+ +++ D K VD+GDI+ V G++ + +GELSVL + + I KSL PLP + +++ + R RQRYVD++ +PE V R R +V IR ++ GF+EVETPVL Sbjct: 16 IRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPI---DTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSE-ESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MYCBP (Lysyl-tRNA synthetase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=lysS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 68/194 (35.05%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGT-IQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R K L ++G +PY RTH+ +++ + L + D V GKL F TL+D GT +Q+ +++ D K VD+GDI+ V G++ + +GELSVL + + I KSL PLP + +++ + R RQRYVD++ +PE V R R +V IR ++ GF+EVETPVL Sbjct: 16 IRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPI---DTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSE-ESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MOUSE (Lysyl-tRNA synthetase OS=Mus musculus GN=Kars PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 63/194 (32.47%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQ-FDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R + V++L+ G +PY +K+ S Q + Y HL G+ V+ GKL F LR + +Q+ S++ F + + GDI+GV G+ +T+KGELS++ +L+ L LP + GL D + RYRQRY+D++ V F R+KI++ IR ++ LGF+E+ETP++ Sbjct: 77 IRSQAVQQLKVTGEDPYPHKFHVDISLTQFIQEYSHLQPGDHLTDVTLKVAGRIHAKRASG-GKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVEGNPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMM 269
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACTN (Lysyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=lysS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 63/206 (30.58%), Postives = 101/206 (49.03%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGE-ESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQL-----KVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPD-------KYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R + ELR+ G++PY +A + + E + E VS GK +F+ L+D G IQ+Y ++ + + +L K +D+GD +G+ G + RT+ GE+S+ +L KS+ PLP Y D + RYRQRYVD+V + + F KRA +V +R ++ G+ EVETP+L Sbjct: 12 IRRNSLNELRAMGIDPYP-------AAEYVTNAFSTDIKAEFKDEDEPRQVSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKELYNSVFKRLLDLGDFVGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVAYDSFEDPELRYRQRYVDLVVNEGIKETFEKRATVVRTLRNALDEAGYTEVETPIL 210
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK1_MYCTU (Lysyl-tRNA synthetase 1 OS=Mycobacterium tuberculosis GN=lysS1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 68/194 (35.05%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGT-IQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R K L ++G +PY RTH+ +++ + L + D V GKL F TL+D GT +Q+ +++ D K VD+GDI+ V G++ + +GELSVL + + I KSL PLP + +++ + R RQRYVD++ +PE V R R +V IR ++ GF+EVETPVL Sbjct: 16 IRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPI---DTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSE-ESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK1_MYCBO (Lysyl-tRNA synthetase 1 OS=Mycobacterium bovis GN=lysS1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 68/194 (35.05%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGT-IQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R K L ++G +PY RTH+ +++ + L + D V GKL F TL+D GT +Q+ +++ D K VD+GDI+ V G++ + +GELSVL + + I KSL PLP + +++ + R RQRYVD++ +PE V R R +V IR ++ GF+EVETPVL Sbjct: 16 IRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPI---DTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSE-ESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_SULAC (Lysyl-tRNA synthetase OS=Sulfolobus acidocaldarius GN=lysS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.883e-22 Identity = 64/192 (33.33%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+K V+EL+SKG+ PY +K+D TH+ ++++ R + + +++ +S GK++F+ + D+ +QL L D++D+ VD GDILGV G + T KGEL++ + +V+L+KSL+ PD + RY RYVD + R + IR+ + S GF+EVETP+L Sbjct: 15 RVKIVDELKSKGINPYPHKYDITHTIIDIKKMER---SDKPTDAFAFDISTAGRVANIRRHGKISFVDIFDEGERLQLQLRVNEL-GDRYDKFFEIVDRGDILGVKGDLLYTIKGELTLRIKDYVLLSKSLIEPPD--WSKLSPEFRYAHRYVDFLYNDLARRNMEIRYSTIRRIREFLYSKGFMEVETPIL 200
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_DEIRA (Lysyl-tRNA synthetase OS=Deinococcus radiodurans GN=lysS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.883e-22 Identity = 67/200 (33.50%), Postives = 100/200 (50.00%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIY--RHLANGEESNSE------NDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+ ++ G E Y Y + +TH A + + R GE E + S GK AF L D+ G IQL+ K+ FD K +D+GDI+GV G T+ G+L++ V + L KSL PLP K+HGL D + R R+RYVD++ + F+ R++++ IR ++ GF+EVE P L Sbjct: 20 RLNNLDAQVDAGFEAYPYSYPQTHHARDVFAAHPAREEGTGEGGTLEPGQKWEEESYSLAGRVTLMRHMGKAAFADLSDEDGKIQLFFSKQDTAG--FDATKK-IDLGDIIGVKGHPFVTKTGQLTLHVTEWQPLVKSLHPLPSKFHGLQDEELRARRRYVDLMVTEGAREKFQARSRMIRYIRNELDERGFMEVEGPTL 216 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |