CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_CAEEL (Lysyl-tRNA synthetase OS=Caenorhabditis elegans GN=krs-1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20 Identity = 63/195 (32.31%), Postives = 103/195 (52.82%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFG-KLAFLTLRDDSGTIQLYCEKERLLSD-QFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R++ +E R+ G P+ +K++ T S Y L E+ + VS G KL F + + IQ+ + D F L + GDI+G +G RT+ GELS++ N + LT L LP + GL D + R+R+RY+D++ P V D F R+KI++ +R+ +++LGF+EVETP++ Sbjct: 59 MRVRMIEARRAAGDNPFPHKFNVTISLTDFITKYTPL---EKEQVVEEIVSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANAKFHTGDVDFVTLHDRIKRGDIVGFTGRATRTKAGELSLIPNEILQLTPCLHMLPHSHFGLKDKELRFRKRYLDLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIM 250
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ARATH (Lysyl-tRNA synthetase OS=Arabidopsis thaliana GN=At3g11710 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.644e-19 Identity = 64/215 (29.77%), Postives = 108/215 (50.23%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDI--GDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHG---------------------LTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+K + ++KG PY +K+ + S + E Y L NG+ + + ++ KL F L D +Q+ + + D+ + LK+ + GDI+GV G +T++GELS+ SF++L+ L +P K L D + RYRQR++DM+ EV +FR RAKI+S +R+ +++ F+EVETP++ Sbjct: 94 RLKYLAAEKAKGENPYPHKFAVSMSIPKYIETYGSLNNGDHVENAEESLAGRIMSKRSSS-SKLFFYDLHGDDFKVQVMADASKSGLDEAEFLKLHSNAKRGDIVGVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADNVNAKKPEIWVPGQTRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDNKNFLEVETPMM 307
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK2_MYCTU (Putative lysyl-tRNA synthetase 2 OS=Mycobacterium tuberculosis GN=lysS2 PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.782e-19 Identity = 61/198 (30.81%), Postives = 104/198 (52.53%), Query Frame = 1 Query: 211 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 E VR +R K+E+LRS G++ + +H+ Q LA +++ VS +G + F LRD SG +Q+ + RL D+GD++ ++G M ++ G S++V+ + ++ K L PLP+K+ GL D + R R RY+D+ E + R+ ++ +R+T+ + GFVEVETP+L Sbjct: 684 EQVR-VRFDKLEKLRSSGIDAFPVGRPPSHTVAQA------LAADHQAS-----VSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADFNAATDLGDLVEMTGHMGASKTGTPSLIVSGWRLIGKCLRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPIL 869
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK2_MYCBO (Putative lysyl-tRNA synthetase 2 OS=Mycobacterium bovis GN=lysS2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.782e-19 Identity = 61/198 (30.81%), Postives = 104/198 (52.53%), Query Frame = 1 Query: 211 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 E VR +R K+E+LRS G++ + +H+ Q LA +++ VS +G + F LRD SG +Q+ + RL D+GD++ ++G M ++ G S++V+ + ++ K L PLP+K+ GL D + R R RY+D+ E + R+ ++ +R+T+ + GFVEVETP+L Sbjct: 684 EQVR-VRFDKLEKLRSSGIDAFPVGRPPSHTVAQA------LAADHQAS-----VSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADFNAATDLGDLVEMTGHMGASKTGTPSLIVSGWRLIGKCLRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPIL 869
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_SOLLC (Lysyl-tRNA synthetase OS=Solanum lycopersicum GN=LYSRS PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18 Identity = 69/226 (30.53%), Postives = 101/226 (44.69%), Query Frame = 1 Query: 223 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSD--QFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLP-------------DKYHGLT-------------------DVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETP 798 A R++ +E LR G+ PY +K+ T S + Y HL GE + D KL F L +Q+ D QF + V GDI+GV G ++++GELS+ F++L L LP + G+T D + RYRQRY+D++ PEV +FR RA+I+S IR +++L F+EVETP Sbjct: 59 ANRLRNIESLRESGINPYPHKFFITMSIPEFISRYAHLNTGEFPE-DIDMSLAGRVISKRASSSKLYFYELLGGGARVQVLASARDSDVDAVQFSNYQSGVKRGDIIGVRGYPGKSKRGELSIFAKPFIVLAPCLHMLPRRLTSSIVDETRTQNFQGITAYDTWTPGDLRNPESYVLRDQETRYRQRYLDLMMNPEVRALFRTRARIISYIRSFLDNLEFLEVETP 283
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MYCGA (Lysyl-tRNA synthetase OS=Mycoplasma gallisepticum GN=lysS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.100e-18 Identity = 59/200 (29.50%), Postives = 102/200 (51.00%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 D+E VR ++ ++ E + E K TH+ L+E Y + + + + D + F+ ++D +QLY K + D F ++D+GD++ +G +T ELS+ + S I++KSL P+K+HG+ D + R R+RY+D+V E + F R+KI++ +R+ GF+EVETP L Sbjct: 11 DQELVRLDKLNRLIESKQNPYE--VTKVANTHNTKSLKEKYDQFSKEQLAEMQLDKPITVSGRVILI---RRTFILIQDFHSELQLYINKNKQ-PDLFKYFNDYLDLGDVVCATGKPMKTNTNELSLDLESLKIISKSLRVPPEKFHGIADEEIRSRKRYLDLVYNKESKERFVYRSKIIAAMRQYFNENGFLEVETPFL 204
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYKC_YEAST (Lysyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=KRS1 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.302e-16 Identity = 64/204 (31.37%), Postives = 102/204 (50.00%), Query Frame = 1 Query: 229 RIKKVEELR-SKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQL------YCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTE-----KGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R ++++ELR + PY +K+ + S + Y HL GE E ++ KL F L D +QL YC+ + D D LK GDI+GV G + RT+ +GE+SV V+ +LT L LP + G D + RYR+RY+D++ + + F R++I+ IR+ ++ F+EVETP++ Sbjct: 77 RSRQIQELRKTHEPNPYPHKFHVSISNPEFLAKYAHLKKGETLPEEKVSIAGRIHAKRESG-SKLKFYVLHGDGVEVQLMSQLQDYCDPDSYEKDH-DLLKR----GDIVGVEGYVGRTQPKKGGEGEVSVFVSRVQLLTPCLHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMM 274
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYKC_SCHPO (Lysyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=krs1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.901e-16 Identity = 59/198 (29.80%), Postives = 97/198 (48.99%), Query Frame = 1 Query: 229 RIKKVEELR-SKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEK-----GELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R + + ELR +K PY +K+ T + + Y LA GE + E + KL F + D +Q+ C+ + + F + GDI+G+ G R+ GELS+ V+L+ L LP +++GL D++ R+RQRY+D++ D F R++I+ IR +S F+EVETP++ Sbjct: 79 RSRTIMELRQTKDPNPYPHKFQVTITLPEFIAKYEGLARGE-TKPEVEVAVAGRVLGLRTAGNKLRFYEIHADGKKLQVMCQAQDADTVDFAAQHEHLRRGDIIGIRGYPGRSNPKGRADGELSIFARQCVLLSPCLRMLPKEHYGLKDLEIRHRQRYLDLIMNRSTRDRFVMRSRIIQYIRHFFDSRDFMEVETPMM 275
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ORYSJ (Lysyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os03g0586800 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.442e-16 Identity = 59/215 (27.44%), Postives = 106/215 (49.30%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKE--RLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLP---------------------DKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+K ++ L++ G+ PY +K+ + E Y+ + G++ + ++ KL F L +Q++ + L ++F + + GDI+GV G ++++GELS+ V+L+ L +P +KY L D + RYRQRY+D++ EV +F+ R+K+VS IRK ++ L F+EVETP++ Sbjct: 86 RLKALDSLKATGVNPYPHKFLANITVADYIEKYKSMNVGDKLVDVTECLAGRIMTKRAQS-SKLLFYDLYGGGEKVQVFADARTSELEDNEFIKFHSTLKRGDIVGVCGYPGKSKRGELSIFPKKIVVLSPCLHMMPRQKSEGSAVPTPWAPGMGRNIEKYV-LRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMM 298
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYKC_ENCCU (Probable lysyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU04_0580 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.219e-14 Identity = 39/102 (38.24%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 499 DQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +Q+ F+ GD++G +G+ RT E SV ++LT L +P ++ GL D + YR+RY+D++ E + F+KRA+I+ IR ++S GF+EVETP++ Sbjct: 33 EQMAKFLRRGDVVGFTGNPGRTRTLEASVFATDIIVLTPCLRTIPTEHFGLKDPETIYRKRYMDLLINRESRNRFQKRAQIIGYIRSFLDSRGFLEVETPMM 134 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |