CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAA3 (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain USA300) GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAA1 (Lysyl-tRNA synthetase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 78/194 (40.21%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ K+DR+ ++ L+E + + E E D HV+ GK F ++D +G IQ+Y K+++ D+FD K D+GDI+GV G M +T GELSV F +LTKSL PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + + GF+EVETP++ Sbjct: 11 VRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKN-ADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_FUSNN (Lysyl-tRNA synthetase OS=Fusobacterium nucleatum subsp. nucleatum GN=lysS PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35 Identity = 79/200 (39.50%), Postives = 121/200 (60.50%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 ++E + A R KK+EEL S G++P+ K+D+ + +I +H EN GK+ F + D SG IQ+Y +K+ L +QFD + +++GDI+G+ G + T EL++ V S +LTK++ LP+KYHGLTDV+ RYR+RYVD++ PEV + F KR KI+ IRK ++ GF+EVETP++ Sbjct: 9 EKEPLIAERWKKIEELESYGIKPFGKKYDKQI---MIGDILKH------KPEENLKFKTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGELFITHTEELTLRVKSIALLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRETFIKRTKIIKAIRKYLDDRGFLEVETPIM 199
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STAHJ (Lysyl-tRNA synthetase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=lysS PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.137e-35 Identity = 72/194 (37.11%), Postives = 124/194 (63.92%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSEND-HVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++EL G++P+ +++R+ +A++L+ + + E + E++ HVS GK F ++D +G IQ+Y K+++ + FD L D+GDI+G+ G M +T GELSV +F +L+K+L PLPDK+HGL D+++RYRQRY+D+++ + F R+KI+ E+R + GF+EVETP++ Sbjct: 11 VRRQKLQELIDLGIDPFGKRFERSATASELKSQWDEFSKEELHDKEDESHVSIAGRLMTKRGKGKAGFAHVQDLTGQIQIYVRKDQIGEEDFDNLWKGADLGDIVGIEGVMFKTNTGELSVKAKTFTLLSKALRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMM 204
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_LACSS (Lysyl-tRNA synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=lysS PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.137e-35 Identity = 75/193 (38.86%), Postives = 123/193 (63.73%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K++ L+ +G++P+ +++RTH A L E + + ++ + +N V+ GK+ F +RD SG IQ+Y K+ + D + K D+GD LG++G + +T+ GEL+V L+K+L PLPDKYHGLT+V++ YRQRY+D+++ PE D F KR+KI+S +R+ +++ F EVETPVL Sbjct: 16 VRREKMQFLKDEGIDPFGSRFERTHLAAALHEEFEAIEK-DDLDVKNQEVTIAGRMMSKRGKGKVGFADIRDRSGKIQIYVRKDEVGEDNYKIFKK-ADLGDHLGITGQIMKTDMGELTVKATHLTFLSKALRPLPDKYHGLTNVEQIYRQRYLDLIANPESMDRFTKRSKIISAVREYLDTHDFTEVETPVL 206
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACC7 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain AH187) GN=lysS PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.137e-35 Identity = 72/193 (37.31%), Postives = 122/193 (63.21%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ LR +G++P+ +++RT++ N+L +Y + EE + VS GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV F +LTKSL PLPDKYHGL DV++RYRQRY+D+++ E + F R+KI+ E+R+ ++ G++EVETP++ Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNELLSLYGEFSK-EELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACC1 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain ATCC 10987) GN=lysS PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.137e-35 Identity = 72/193 (37.31%), Postives = 122/193 (63.21%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ LR +G++P+ +++RT++ N+L +Y + EE + VS GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV F +LTKSL PLPDKYHGL DV++RYRQRY+D+++ E + F R+KI+ E+R+ ++ G++EVETP++ Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNELLSLYGEFSK-EELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_PELTS (Lysyl-tRNA synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=lysS PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.645e-35 Identity = 80/200 (40.00%), Postives = 121/200 (60.50%), Query Frame = 1 Query: 205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 D + +R +K+ ELR KG+EPY +++RTH+A + + + + EN V GK F ++D +G IQ+Y + + ++ L +DIGDI+GV GS+ +T GE++V SF IL+KSL PLP+K+HGL DV+ RYRQRYVD++ PEV +VF R+KI+ R ++ GF+EVETP++ Sbjct: 21 DLNELMRVRREKLAELRDKGIEPYGGRFERTHTARYILDNFVEM--------ENRPVVIAGRIMSRRGMGKATFAHIQDGTGQIQIYVRLNDVGPESYE-LFGRLDIGDIIGVQGSVFKTRMGEITVAAESFKILSKSLRPLPEKWHGLRDVELRYRQRYVDLIVNPEVKEVFETRSKIIRACRNFLDGKGFLEVETPMM 211
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACSK (Lysyl-tRNA synthetase OS=Bacillus clausii (strain KSM-K16) GN=lysS PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.645e-35 Identity = 77/194 (39.69%), Postives = 121/194 (62.37%), Query Frame = 1 Query: 223 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 A+R K+ +L +G+ P+ K++RTH++N++ E + EE ++DHV GK F ++D G IQ+Y ++ + + + K +DIGD++GV G +T+ GE+SV V VIL KSL PLPDKYHGL DV++RYRQRY+D+++ PE F R+KI+ +R+ ++ GF+EVETP++ Sbjct: 15 AVRRDKLNQLYDEGINPFGGKFERTHTSNEVIEQFAAFTK-EELEEKDDHVVLAGRLMTKRGKGKAGFAHIQDIGGQIQIYVRQDAVGEEAYGLFKS-LDIGDMVGVGGRPFKTKVGEMSVKVTELVILGKSLRPLPDKYHGLKDVEQRYRQRYLDLITSPESRTAFITRSKIIQVMRRYLDEKGFLEVETPMM 206
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACHK (Lysyl-tRNA synthetase OS=Bacillus thuringiensis subsp. konkukian GN=lysS PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.645e-35 Identity = 72/193 (37.31%), Postives = 121/193 (62.69%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ LR +G++P+ +++RT++ N L +Y + EE + VS GK F ++D G +Q+Y K+ + ++++ K D+GD++G+ G + +T GELSV F +LTKSL PLPDKYHGL DV++RYRQRY+D+++ E + F R+KI+ E+R+ ++ G++EVETP++ Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |