CK933146

Overview
NameCK933146
Unique NameCK933146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACCZ (Lysyl-tRNA synthetase OS=Bacillus cereus (strain ZK / E33L) GN=lysS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.645e-35
Identity = 72/193 (37.31%), Postives = 121/193 (62.69%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT++ N L  +Y   +  EE   +   VS           GK  F  ++D  G +Q+Y  K+ +  ++++  K   D+GD++G+ G + +T  GELSV    F +LTKSL PLPDKYHGL DV++RYRQRY+D+++  E  + F  R+KI+ E+R+ ++  G++EVETP++
Sbjct:   15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACC0 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain AH820) GN=lysS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.645e-35
Identity = 72/193 (37.31%), Postives = 121/193 (62.69%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT++ N L  +Y   +  EE   +   VS           GK  F  ++D  G +Q+Y  K+ +  ++++  K   D+GD++G+ G + +T  GELSV    F +LTKSL PLPDKYHGL DV++RYRQRY+D+++  E  + F  R+KI+ E+R+ ++  G++EVETP++
Sbjct:   15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACAN (Lysyl-tRNA synthetase OS=Bacillus anthracis GN=lysS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.645e-35
Identity = 72/193 (37.31%), Postives = 121/193 (62.69%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT++ N L  +Y   +  EE   +   VS           GK  F  ++D  G +Q+Y  K+ +  ++++  K   D+GD++G+ G + +T  GELSV    F +LTKSL PLPDKYHGL DV++RYRQRY+D+++  E  + F  R+KI+ E+R+ ++  G++EVETP++
Sbjct:   15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACAH (Lysyl-tRNA synthetase OS=Bacillus thuringiensis (strain Al Hakam) GN=lysS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.645e-35
Identity = 72/193 (37.31%), Postives = 121/193 (62.69%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT++ N L  +Y   +  EE   +   VS           GK  F  ++D  G +Q+Y  K+ +  ++++  K   D+GD++G+ G + +T  GELSV    F +LTKSL PLPDKYHGL DV++RYRQRY+D+++  E  + F  R+KI+ E+R+ ++  G++EVETP++
Sbjct:   15 VRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSK-EELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRMU (Lysyl-tRNA synthetase OS=Streptococcus mutans GN=lysS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.760e-35
Identity = 79/193 (40.93%), Postives = 120/193 (62.18%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+E L  +G++P+  +++RT ++ QL+E Y      EE +  N+  +           GK+ F  L+D  G IQ+Y  K+ +  D +   K   DIGD LGV G + RT+ GELS+       L+K+L PLP+K+HGLTDV+  YR+RY+D++S  E  + F  R+KI+SEIR+ ++ LGF+EVETPVL
Sbjct:   15 VRREKMEALTEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHDINETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKK-ADIGDFLGVEGEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFITRSKIISEIRRYLDGLGFLEVETPVL 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACCR (Lysyl-tRNA synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=lysS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.760e-35
Identity = 73/193 (37.82%), Postives = 120/193 (62.18%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT+S   L  +Y   +  EE   +   VS           GK  F  ++D  G +Q+Y  K+ +  D+++  K   D+GD++G+ G + +T  GELSV    F +LTKSL PLPDKYHGL DV++RYRQRY+D+++  E  + F  R+KI+ E+R+ ++  G++EVETP++
Sbjct:   15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEIAVSIAGRIMTKRGKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACC4 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain B4264) GN=lysS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.760e-35
Identity = 73/193 (37.82%), Postives = 120/193 (62.18%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT+S   L  +Y   +  EE   +   VS           GK  F  ++D  G +Q+Y  K+ +  D+++  K   D+GD++G+ G + +T  GELSV    F +LTKSL PLPDKYHGL DV++RYRQRY+D+++  E  + F  R+KI+ E+R+ ++  G++EVETP++
Sbjct:   15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEIAVSIAGRIMTKRGKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFKT-ADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACSU (Lysyl-tRNA synthetase OS=Bacillus subtilis GN=lysS PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.217e-35
Identity = 75/193 (38.86%), Postives = 119/193 (61.66%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R  K+ +LR  G++P+  +++RTH + ++   Y+ L   EE   +   V+           GK  F  L+D  G IQ+Y  K+ +  DQ++  K   D+GD++GV+G + +T  GELSV   SF +LTK+L PLPDKYHGL DV++RYRQRY+D++  P+    F  R+KI+  +R+ ++  G++EVETP +
Sbjct:   17 VRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTK-EELEEKAIEVTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKSS-DLGDLIGVTGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYLDDHGYLEVETPTM 207          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_METMJ (Lysyl-tRNA synthetase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=lysS PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.060e-34
Identity = 76/200 (38.00%), Postives = 117/200 (58.50%), Query Frame = 1
Query:  205 DREAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            D       +I K++ELR +G+  Y Y +DR  +  +++E +  +    E +   + VS           GK  F  + D  G IQLY  K  L  +QFD  K +VD GDI+GV G + RT+ GE++V V+ F +LTKS+ PLP+K+HGL +V+ RYRQRY+D++   E  + FR R++I+S +R+ +    ++E ETP L
Sbjct:    5 DHTCFDTAKIDKLQELRERGVTVYPYTFDRRDTVEEIKERFSAI----EHDKSEEEVSTAGRVYVVRQHGKTIFADIGDSEGRIQLYLRKNDLGEEQFDLFKQYVDAGDIVGVVGHVFRTKMGEITVWVDRFELLTKSVCPLPEKFHGLKNVETRYRQRYLDLIMNEESRETFRARSRIISLLRQFLFERDYLEFETPTL 200          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_LACLM (Lysyl-tRNA synthetase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=lysS PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.385e-34
Identity = 77/198 (38.89%), Postives = 118/198 (59.60%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXF-----GKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+E LR  G++P+ +K+ RTH++ +L E Y      +E   E  H                  GK+ F  L+D  G IQLY  K+ +  + ++  K   D+GD LGV G + +T+ GELS+       L+K+L PLP+K+HGLTD + RYR+RY+D++S  E  + F  R+KI+SEIR+ ++  G++EVETPVL
Sbjct:   13 VRREKMENLRDAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDMGELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETPVL 203          
The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
SYK_BACCZ3.645e-3537.31Lysyl-tRNA synthetase OS=Bacillus cereus (strain Z... [more]
SYK_BACC03.645e-3537.31Lysyl-tRNA synthetase OS=Bacillus cereus (strain A... [more]
SYK_BACAN3.645e-3537.31Lysyl-tRNA synthetase OS=Bacillus anthracis GN=lys... [more]
SYK_BACAH3.645e-3537.31Lysyl-tRNA synthetase OS=Bacillus thuringiensis (s... [more]
SYK_STRMU4.760e-3540.93Lysyl-tRNA synthetase OS=Streptococcus mutans GN=l... [more]
SYK_BACCR4.760e-3537.82Lysyl-tRNA synthetase OS=Bacillus cereus (strain A... [more]
SYK_BACC44.760e-3537.82Lysyl-tRNA synthetase OS=Bacillus cereus (strain B... [more]
SYK_BACSU6.217e-3538.86Lysyl-tRNA synthetase OS=Bacillus subtilis GN=lysS... [more]
SYK_METMJ1.060e-3438.00Lysyl-tRNA synthetase OS=Methanoculleus marisnigri... [more]
SYK_LACLM1.385e-3438.89Lysyl-tRNA synthetase OS=Lactococcus lactis subsp.... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_A08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bp
GGGGGAGTGGAGTGAAAATCAGAGAAAACAAAGATGGAGGCTTTGAAGTT
GTGGAGTACTCTATCCTCTCTACCAATCAGCTTCCGACACGTCATCCGCC
GGCGAACCTCTTTGACGTTTGTCCGCTGTCGCTCTTCCACTTCTATCACC
GTTTCCGCCGGCACTAGAAACCGTCGTGCTTCATCTTCTTCTACCTCCAC
TTCTGACCGCGAGGCCGTTCGTGCCCTGCGCATTAAGAAGGTAGAAGAAT
TGAGGAGCAAAGGGTTGGAGCCCTATGCATATAAGTGGGATAGGACGCAT
TCTGCAAATCAGCTACAAGAGATATATAGGCATTTAGCAAATGGTGAAGA
GTCGAATAGTGAGAATGATCATGTATCTGTAGCTGGGAGAGTTGTTGCTC
GTAGAGCATTTGGGAAGCTTGCATTTTTGACACTAAGAGATGACTCGGGT
ACGATACAGCTTTACTGCGAGAAGGAAAGGCTTTTAAGTGATCAGTTTGA
TCAGTTAAAGGTATTTGTTGATATTGGTGATATACTGGGTGTTAGTGGCT
CAATGAAACGGACAGAAAAAGGTGAGCTTTCTGTTCTTGTCAATTCATTC
GTGATTCTGACAAAATCTCTACTTCCGCTACCAGACAAATATCATGGTTT
AACTGATGTGGATAAACGTTACCGCCAAAGGTACGTAGATATGGTTTCAA
AACCTGAAGTAGCTGATGTATTCCGGAAAAGAGCAAAGATTGTTTCAGAG
ATACGCAAGACAGTGGAGTCTTTGGGTTTTGTTGAAGTTGAAACTCCAGT
TCTGCA
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