CK933146

Overview
NameCK933146
Unique NameCK933146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_LACLA (Lysyl-tRNA synthetase OS=Lactococcus lactis subsp. lactis GN=lysS PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.385e-34
Identity = 77/198 (38.89%), Postives = 118/198 (59.60%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXF-----GKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+E LR  G++P+ +K+ RTH++ +L E Y      +E   E  H                  GK+ F  L+D  G IQLY  K+ +  + ++  K   D+GD LGV G + +T+ GELS+       L+K+L PLP+K+HGLTD + RYR+RY+D++S  E  + F  R+KI+SEIR+ ++  G++EVETPVL
Sbjct:   13 VRREKMENLREAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDMGELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETPVL 203          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_THEAB (Lysyl-tRNA synthetase OS=Thermosipho africanus (strain TCF52B) GN=lysS PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.809e-34
Identity = 74/195 (37.95%), Postives = 121/195 (62.05%), Query Frame = 1
Query:  220 RALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            R  RI +++++ +KG+ PY YK+++THS+  ++  + +L  GE    E+  VS           GK AF  ++D  G IQ Y  ++ +  D ++  K  + IGDI+GV GS+ +++ GE+++LV    +L K L P+P+K+HG+ D +  YRQRYVDM++  E  + FR R +I+  IR+ + S GF+EVETP+L
Sbjct:    6 REQRINEIKQISAKGVNPYPYKFEKTHSSQDIKAQFENLNPGEVK--EDASVSTAGRIMSLRHHGKSAFFHIKDFFGRIQAYIRQDIVGKDVYEFFKEHIAIGDIVGVKGSVFKSKTGEVTILVKEIELLNKPLRPMPEKWHGIKDKEVLYRQRYVDMIANDETLNRFRIRFEIIKLIREFLNSKGFIEVETPIL 198          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_DEHE1 (Lysyl-tRNA synthetase OS=Dehalococcoides ethenogenes (strain 195) GN=lysS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.363e-34
Identity = 75/198 (37.88%), Postives = 119/198 (60.10%), Query Frame = 1
Query:  211 EAVRALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            E + A +++K+E ++S+G+ PY   +  +H++ Q   +   L   E  N   + +            GK++F+ +RD SG IQ++C +  L     + LK  +D+GD +G  GS+ RT  GE S+      +L+KSLLPLP+K+HGL DV+KRYRQRY+D++S  +    F  R++++S IR  + S GF+EVETPVL
Sbjct:    4 EYLNAQKMEKLERIKSRGINPYPATFHPSHTSVQAVALLAELEKQE--NPPKEILRIAGRIMTLRDMGKISFMDIRDGSGKIQVFCRQNDLDEASIELLKD-LDLGDFIGAEGSLMRTRTGEPSLAATKISLLSKSLLPLPEKWHGLQDVEKRYRQRYLDLISNADARQTFLTRSQVISAIRSFMSSKGFLEVETPVL 198          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_THELT (Lysyl-tRNA synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=lysS PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.086e-34
Identity = 76/192 (39.58%), Postives = 114/192 (59.38%), Query Frame = 1
Query:  229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            R K+VEELR  G+ PY YK+++TH+   +QE ++ L  GE    E   +S           GK  F T++D  G IQ Y  +  +  ++++  K ++  GDI+G++G   ++  GEL+V V +F +L+KS  PLP+K+HGL D +  YRQRYVDM++     + FR R + +  IR  +  L FVEVETPVL
Sbjct:    9 RAKEVEELRKLGVNPYPYKFEKTHTTKTIQEKFQALQPGEVLQDEE--ISTAGRVMTVRLHGKSCFFTIKDFYGRIQAYIRQNEISEEKYNLFKKYIAPGDIIGITGFPFKSRTGELTVYVKNFQLLSKSRRPLPEKWHGLKDKEVAYRQRYVDMIANDSTLERFRIRYEAIRFIRDFLNRLDFVEVETPVL 198          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACC2 (Lysyl-tRNA synthetase OS=Bacillus cereus (strain G9842) GN=lysS PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.086e-34
Identity = 72/193 (37.31%), Postives = 120/193 (62.18%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT+S   L  +Y   +  EE   +   VS           GK  F  ++D  G +Q+Y  K+ +  ++++ L    D+GD++G+ G + +T  GELSV    F +LTKSL PLPDKYHGL DV++RYRQRY+D+++  E  + F  R+KI+ E+R+ ++  G++EVETP++
Sbjct:   15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDTVGDEEYE-LFTTADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRR6 (Lysyl-tRNA synthetase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=lysS PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.263e-34
Identity = 74/193 (38.34%), Postives = 124/193 (64.25%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT ++ +L++ Y +L + E+ + +N+  +           GK+ F  L+D  G IQ+Y  K+ +  + ++  K   D+GD LGV G + RT+ GELS+       L+K+L PLP+K+HGLTDV+  YR+RY+D++S  E  + F  R+KI+SEIR+ ++  GF+EVETPVL
Sbjct:   15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVL 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRPS (Lysyl-tRNA synthetase OS=Streptococcus pneumoniae (strain CGSP14) GN=lysS PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.263e-34
Identity = 74/193 (38.34%), Postives = 124/193 (64.25%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT ++ +L++ Y +L + E+ + +N+  +           GK+ F  L+D  G IQ+Y  K+ +  + ++  K   D+GD LGV G + RT+ GELS+       L+K+L PLP+K+HGLTDV+  YR+RY+D++S  E  + F  R+KI+SEIR+ ++  GF+EVETPVL
Sbjct:   15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVL 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRPN (Lysyl-tRNA synthetase OS=Streptococcus pneumoniae GN=lysS PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 5.263e-34
Identity = 74/193 (38.34%), Postives = 124/193 (64.25%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT ++ +L++ Y +L + E+ + +N+  +           GK+ F  L+D  G IQ+Y  K+ +  + ++  K   D+GD LGV G + RT+ GELS+       L+K+L PLP+K+HGLTDV+  YR+RY+D++S  E  + F  R+KI+SEIR+ ++  GF+EVETPVL
Sbjct:   15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLITKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVL 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRPI (Lysyl-tRNA synthetase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=lysS PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.263e-34
Identity = 74/193 (38.34%), Postives = 124/193 (64.25%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT ++ +L++ Y +L + E+ + +N+  +           GK+ F  L+D  G IQ+Y  K+ +  + ++  K   D+GD LGV G + RT+ GELS+       L+K+L PLP+K+HGLTDV+  YR+RY+D++S  E  + F  R+KI+SEIR+ ++  GF+EVETPVL
Sbjct:   15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVL 205          
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRP4 (Lysyl-tRNA synthetase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=lysS PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.263e-34
Identity = 74/193 (38.34%), Postives = 124/193 (64.25%), Query Frame = 1
Query:  226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804
            +R +K+  LR +G++P+  +++RT ++ +L++ Y +L + E+ + +N+  +           GK+ F  L+D  G IQ+Y  K+ +  + ++  K   D+GD LGV G + RT+ GELS+       L+K+L PLP+K+HGLTDV+  YR+RY+D++S  E  + F  R+KI+SEIR+ ++  GF+EVETPVL
Sbjct:   15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVL 205          
The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
SYK_LACLA1.385e-3438.89Lysyl-tRNA synthetase OS=Lactococcus lactis subsp.... [more]
SYK_THEAB1.809e-3437.95Lysyl-tRNA synthetase OS=Thermosipho africanus (st... [more]
SYK_DEHE12.363e-3437.88Lysyl-tRNA synthetase OS=Dehalococcoides ethenogen... [more]
SYK_THELT3.086e-3439.58Lysyl-tRNA synthetase OS=Thermotoga lettingae (str... [more]
SYK_BACC23.086e-3437.31Lysyl-tRNA synthetase OS=Bacillus cereus (strain G... [more]
SYK_STRR65.263e-3438.34Lysyl-tRNA synthetase OS=Streptococcus pneumoniae ... [more]
SYK_STRPS5.263e-3438.34Lysyl-tRNA synthetase OS=Streptococcus pneumoniae ... [more]
SYK_STRPN5.263e-3438.34Lysyl-tRNA synthetase OS=Streptococcus pneumoniae ... [more]
SYK_STRPI5.263e-3438.34Lysyl-tRNA synthetase OS=Streptococcus pneumoniae ... [more]
SYK_STRP45.263e-3438.34Lysyl-tRNA synthetase OS=Streptococcus pneumoniae ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_A08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bp
GGGGGAGTGGAGTGAAAATCAGAGAAAACAAAGATGGAGGCTTTGAAGTT
GTGGAGTACTCTATCCTCTCTACCAATCAGCTTCCGACACGTCATCCGCC
GGCGAACCTCTTTGACGTTTGTCCGCTGTCGCTCTTCCACTTCTATCACC
GTTTCCGCCGGCACTAGAAACCGTCGTGCTTCATCTTCTTCTACCTCCAC
TTCTGACCGCGAGGCCGTTCGTGCCCTGCGCATTAAGAAGGTAGAAGAAT
TGAGGAGCAAAGGGTTGGAGCCCTATGCATATAAGTGGGATAGGACGCAT
TCTGCAAATCAGCTACAAGAGATATATAGGCATTTAGCAAATGGTGAAGA
GTCGAATAGTGAGAATGATCATGTATCTGTAGCTGGGAGAGTTGTTGCTC
GTAGAGCATTTGGGAAGCTTGCATTTTTGACACTAAGAGATGACTCGGGT
ACGATACAGCTTTACTGCGAGAAGGAAAGGCTTTTAAGTGATCAGTTTGA
TCAGTTAAAGGTATTTGTTGATATTGGTGATATACTGGGTGTTAGTGGCT
CAATGAAACGGACAGAAAAAGGTGAGCTTTCTGTTCTTGTCAATTCATTC
GTGATTCTGACAAAATCTCTACTTCCGCTACCAGACAAATATCATGGTTT
AACTGATGTGGATAAACGTTACCGCCAAAGGTACGTAGATATGGTTTCAA
AACCTGAAGTAGCTGATGTATTCCGGAAAAGAGCAAAGATTGTTTCAGAG
ATACGCAAGACAGTGGAGTCTTTGGGTTTTGTTGAAGTTGAAACTCCAGT
TCTGCA
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