CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRP2 (Lysyl-tRNA synthetase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=lysS PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.263e-34 Identity = 74/193 (38.34%), Postives = 124/193 (64.25%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ LR +G++P+ +++RT ++ +L++ Y +L + E+ + +N+ + GK+ F L+D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D++S E + F R+KI+SEIR+ ++ GF+EVETPVL Sbjct: 15 VRREKMAALREQGIDPFGKRFERTANSQELKDKYANL-DKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ROSCS (Lysyl-tRNA synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=lysS PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.263e-34 Identity = 76/192 (39.58%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+ K+E LR+ G++PY + RTH+ ++ + L + E + + GKLAF + D+SG IQL+ + L + FD+ + +D DI+ SG+++RT++GE SV V +L KSL P P+K+HGL+D+++R+RQRY+D++ PEV DVFR RA IV +R+ ++ GF+EVETP L Sbjct: 10 RLAKLERLRAAGIDPYPPRAQRTHTIGEVLAGFDQLMDRGEQVTVAGRI-----VGARRVLGKLAFAHIEDESGRIQLWLSRGDLGDEWFDRFRDDLDTFDIVEASGTLRRTQRGEPSVFVTRMGVLAKSLNPPPEKWHGLSDIEERHRQRYLDLIVNPEVRDVFRTRATIVRTMRRFLDERGFLEVETPTL 196
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_BACWK (Lysyl-tRNA synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=lysS PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.263e-34 Identity = 72/193 (37.31%), Postives = 120/193 (62.18%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ LR +G++P+ +++RT+S L +Y + EE + VS GK F ++D G +Q+Y K+ + ++++ L D+GD++G+ G + +T GELSV F +LTKSL PLPDKYHGL DV++RYRQRY+D+++ E + F R+KI+ E+R+ ++ G++EVETP++ Sbjct: 15 VRREKLHNLREQGIDPFGKRFERTNSTTDLVSLYGEFSK-EELEEKEITVSIAGRIMTKRGKGKAGFAHIQDLQGQVQIYVRKDTVGDEEYE-LFTTADLGDLVGIEGKVFKTNVGELSVKAIGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMM 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_WOLSU (Lysyl-tRNA synthetase OS=Wolinella succinogenes GN=lysS PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.874e-34 Identity = 80/194 (41.24%), Postives = 115/194 (59.28%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLAN--GEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 RI+K EELR G PY + RT + Q + + L + EE E+ S GK AF + D+SG +Q+Y + L D F LK ++GDI+ VSG T+ GELS+ ILTK+++PLP+KYHGL DV+ RYRQRY+D++ PEV + F+ R+++VS +R+ E GF+EVETP++ Sbjct: 11 RIQKGEELRELGRNPYDNQLMRTLTHAQFLQKFEALKSLESEEKRDESAKESIAGRIKFLRHMGKAAFAKIEDESGILQIYFSQNELGED-FKMLKKLAEVGDIVAVSGFPFVTKTGELSLHALEMKILTKAIVPLPEKYHGLVDVELRYRQRYLDLIMNPEVKETFKLRSQVVSSVRRFFEERGFLEVETPMM 203
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_ROSS1 (Lysyl-tRNA synthetase OS=Roseiflexus sp. (strain RS-1) GN=lysS PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.874e-34 Identity = 75/192 (39.06%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+ K+E LR+ G++PY + RTH+ + + L E + + GKLAF + D+SG IQ++ + + + FD+ + +D DI+ +G+++RT++GE SV V +L KSL P P+K+HGL+D+++R+RQRY+D++ PEV DVFR RAKIVS +R+ ++ GF+EVETP L Sbjct: 10 RLAKLERLRAAGIDPYPPRTRRTHTIGFVLASFDQLMERGEQVTVAGRI-----VGARRILGKLAFAHIEDESGRIQIWLSRGDIGDEWFDRFRDDLDTFDIVEATGTLRRTQRGEPSVFVERLGVLAKSLNPPPEKWHGLSDIEERHRQRYLDLIVNPEVRDVFRTRAKIVSTMRRFLDERGFLEVETPTL 196
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_THETH (Lysyl-tRNA synthetase OS=Thermus thermophilus GN=lysS PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.978e-34 Identity = 81/192 (42.19%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+ +E L G PY Y++ +THSA + + R ES + V+ GK+ F L D++G IQLY +++ L+ +++ LK +D+GDILGV G T+ GE++V V + L KSL PLPDK+HGL D + RYRQRY+D++ PEV +VFR+R++IV IR+ E+ GF+EVETP+L Sbjct: 8 RLLNLEALVEAGFAPYPYRFPKTHSAEAILKAKRGAP--PESEWPEEEVAVAGRLVALRRMGKVTFAHLLDETGRIQLYFQRD--LTPKYELLKK-LDVGDILGVRGHPFTTKTGEVTVKVLDWTPLVKSLHPLPDKWHGLRDKEVRYRQRYLDLIVNPEVREVFRRRSEIVRYIRRFFEAKGFLEVETPIL 194
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_THET8 (Lysyl-tRNA synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=lysS PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.978e-34 Identity = 81/192 (42.19%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+ +E L G PY Y++ +THSA + + R ES + V+ GK+ F L D++G IQLY +++ L+ +++ LK +D+GDILGV G T+ GE++V V + L KSL PLPDK+HGL D + RYRQRY+D++ PEV +VFR+R++IV IR+ E+ GF+EVETP+L Sbjct: 8 RLLNLEALVEAGFAPYPYRFPKTHSAEAILKAKRGAP--PESEWPEEEVAVAGRLVALRRMGKVTFAHLLDETGRIQLYFQRD--LTPKYELLKK-LDVGDILGVRGHPFTTKTGEVTVKVLDWTPLVKSLHPLPDKWHGLRDKEVRYRQRYLDLIVNPEVREVFRRRSEIVRYIRRFFEAKGFLEVETPIL 194
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_THET2 (Lysyl-tRNA synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=lysS PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.978e-34 Identity = 81/192 (42.19%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 R+ +E L G PY Y++ +THSA + + R ES + V+ GK+ F L D++G IQLY +++ L+ +++ LK +D+GDILGV G T+ GE++V V + L KSL PLPDK+HGL D + RYRQRY+D++ PEV +VFR+R++IV IR+ E+ GF+EVETP+L Sbjct: 8 RLLNLEALVEAGFAPYPYRFPKTHSAEAILKAKRGAP--PESEWPEEEVAVAGRLVALRRMGKVTFAHLLDETGRIQLYFQRD--LTPKYELLKK-LDVGDILGVRGHPFTTKTGEVTVKVLDWTPLVKSLHPLPDKWHGLRDKEVRYRQRYLDLIVNPEVREVFRRRSEIVRYIRRFFEAKGFLEVETPIL 194
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_MOOTA (Lysyl-tRNA synthetase OS=Moorella thermoacetica (strain ATCC 39073) GN=lysS PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.978e-34 Identity = 77/194 (39.69%), Postives = 116/194 (59.79%), Query Frame = 1 Query: 223 ALRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 A+R++K+ +L+ G+EPY ++ THS ++E + L E V+ GK +F L+D G +QLY + + ++ + +DIGDI+GV G + RT +GE+SV V +L KSL PLP+K+HGL DVD RYRQRY+D++ PEV VF RA+I+ IR +++ GF+EVETP + Sbjct: 11 AVRLEKLHQLQEAGIEPYGGPFEVTHSTTAIRERFDEL--------EGQEVALAGRLLAIRSHGKASFADLQDREGRLQLYIRLDNVGPGIYELFQK-LDIGDIVGVRGKVFRTHRGEISVEVRQLTLLCKSLRPLPEKWHGLKDVDLRYRQRYLDLIVNPEVKQVFITRARIIRAIRSFLDNRGFLEVETPTM 195
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_LACLS (Lysyl-tRNA synthetase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=lysS PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.411e-33 Identity = 75/198 (37.88%), Postives = 116/198 (58.59%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXF-----GKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ L G++P+ +K+ RTH++ +L E Y +E E H GK+ F L+D G IQLY K+ + + ++ K D+GD LGV G + +T+ GELS+ L+K+L PLP+K+HGLTD + RYR+RY+D++S E + F R+KI+SEIR+ ++ G++EVETPVL Sbjct: 13 VRREKMGNLHDAGIDPFGHKFTRTHNSQELHEAY------DEKTKEELHELALSGIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKK-ADLGDFLGVEGEIMKTDMGELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETPVL 203 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |