CK933146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_HELPS (Lysyl-tRNA synthetase OS=Helicobacter pylori (strain Shi470) GN=lysS PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.411e-33 Identity = 76/192 (39.58%), Postives = 113/192 (58.85%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 RI K LR +G PY R+ + E Y ++ EE + S GK F+ + D+S +Q Y + L +D+F LK +++GDI+ V G T+ GELSV F IL+K+++PLP+K+HGL+D++ RYRQRY+D++ P V DVF+KR+ IVS +RK E+ GF+EVETP++ Sbjct: 10 RIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKGLEEPKDKEKCESIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNEL-NDEFKSLKKHLEVGDIVLVKGFPFATKTGELSVHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMM 200
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRSV (Lysyl-tRNA synthetase OS=Streptococcus sanguinis (strain SK36) GN=lysS PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.819e-33 Identity = 74/193 (38.34%), Postives = 119/193 (61.66%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ L +G++P+ +++RT ++ QL+E Y + EE N N+ GK+ F ++D G IQ+Y K+ + + ++ K D+GD LG+ G + RT+ GELS+ L+K+L PLP+K+HGLTDV+ YR+RY+D++S E + F R+KI+SEIR+ ++ GF+EVETPVL Sbjct: 15 IRREKMAALAEQGIDPFGKRFERTANSAQLKEKYND-KDKEELNELNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGIEGEIMRTDMGELSIKATHLTHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRPG (Lysyl-tRNA synthetase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=lysS PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.819e-33 Identity = 75/193 (38.86%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+ L+KSL PLP+K+HGLTD++ YR+R++D++S E D F R+K++SEIR+ ++ L F+EVETPVL Sbjct: 15 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYADKTK-EELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVSEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSIKATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRP8 (Lysyl-tRNA synthetase OS=Streptococcus pyogenes serotype M18 GN=lysS PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.819e-33 Identity = 75/193 (38.86%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+ L+KSL PLP+K+HGLTD++ YR+R++D++S E D F R+K++SEIR+ ++ L F+EVETPVL Sbjct: 15 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYADKTK-EELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVSEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSIKATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRP6 (Lysyl-tRNA synthetase OS=Streptococcus pyogenes serotype M6 GN=lysS PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.819e-33 Identity = 75/193 (38.86%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+ L+KSL PLP+K+HGLTD++ YR+R++D++S E D F R+K++SEIR+ ++ L F+EVETPVL Sbjct: 15 VRREKMMALAEQGIDPFGKRFDRTANSAELKEKYADKTK-EELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVSEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSIKATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_HELP2 (Lysyl-tRNA synthetase OS=Helicobacter pylori (strain P12) GN=lysS PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.819e-33 Identity = 76/192 (39.58%), Postives = 113/192 (58.85%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 RI K LR +G PY R+ + E Y ++ + EE + S GK F+ + D+S +Q Y + L +D+F LK +++GDI+ V G T+ GELSV F IL+K+++PLP+K+HGL+D++ RYRQRY+D++ P V DVF+KR+ IVS +RK E GF+EVETP++ Sbjct: 10 RIHKANSLREEGKNPYQNGLKRSLTNAAFLEKYAYVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKVEDESAILQAYVSQNEL-NDEFKSLKKHLEVGDIVLVKGFPFATKTGELSVHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_HELHP (Lysyl-tRNA synthetase OS=Helicobacter hepaticus GN=lysS PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.819e-33 Identity = 80/197 (40.61%), Postives = 119/197 (60.41%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHL----ANGEESNSENDHV-SXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 RIKK+E +R +G PYA K RT S Y HL ++ + ++N + S GK F+ ++D+SG +Q Y K + D F +K +++GDI+ VSG T+ GELS+ + ILTKS++PLP+K+HGL D++ RYRQRYVD++ +V + F+ R++IVS IR+ E GF+EVETP+L Sbjct: 10 RIKKMELMRQEGFNPYANKTTRTISNYNFLNKYNHLKMQSSDDTQDCTQNKEIESIVGRVRFIRLMGKACFIKIQDESGILQAYVSKNDIGED-FLLIKKVLEVGDIINVSGYAFVTKTGELSIHTLTLQILTKSIVPLPEKFHGLNDIELRYRQRYVDLIVNNKVKETFKLRSQIVSCIRQFFEQKGFLEVETPML 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRTD (Lysyl-tRNA synthetase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=lysS PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.600e-33 Identity = 73/193 (37.82%), Postives = 120/193 (62.18%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ L +G++P+ +++RT ++ QL+E Y EE + N+ + GK+ F ++D G IQ+Y K+ + + ++ K D+GD LGV G + RT+ GELS+ L+K+L PLP+K+HGL+D++ YR+RY+D++S E D F R+KI+SEIR+ +++ GF+EVETPVL Sbjct: 15 VRREKMAALAEQGIDPFGKRFERTATSGQLKEKYADKTK-EELHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKK-ADLGDFLGVEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_STRP1 (Lysyl-tRNA synthetase OS=Streptococcus pyogenes serotype M1 GN=lysS PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.600e-33 Identity = 75/193 (38.86%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 226 LRIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 +R +K+ L +G++P+ ++DRT ++ +L+E Y EE + N+ GK+ F L+D G IQLY K+ + D ++ K D+GD +GV G + RT+ GELS+ L+KSL PLP+K+HGLTD++ YR+R++D++S E D F R+K++SEIR+ ++ L F+EVETPVL Sbjct: 15 VRREKMTALAEQGIDPFGKRFDRTANSAELKEKYADKTK-EELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKK-ADLGDFIGVEGEVMRTDMGELSIKATKLTHLSKSLRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVL 205
BLAST of CK933146 vs. ExPASy Swiss-Prot
Match: SYK_HELPG (Lysyl-tRNA synthetase OS=Helicobacter pylori (strain G27) GN=lysS PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.600e-33 Identity = 76/192 (39.58%), Postives = 113/192 (58.85%), Query Frame = 1 Query: 229 RIKKVEELRSKGLEPYAYKWDRTHSANQLQEIYRHLANGEESNSENDHVSXXXXXXXXXXFGKLAFLTLRDDSGTIQLYCEKERLLSDQFDQLKVFVDIGDILGVSGSMKRTEKGELSVLVNSFVILTKSLLPLPDKYHGLTDVDKRYRQRYVDMVSKPEVADVFRKRAKIVSEIRKTVESLGFVEVETPVL 804 RI K LR +G PY R+ + E Y ++ + EE + S GK F+ + D+S +Q Y + L +D+F LK +++GDI+ V G T+ GELSV F IL+K+++PLP+K+HGL+D++ RYRQRY+D++ P V DVF+KR+ IVS +RK E GF+EVETP++ Sbjct: 10 RIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNEL-NDEFKSLKKHLEVGDIVLVKGFPFATKTGELSVHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200 The following BLAST results are available for this feature:
BLAST of CK933146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 437
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933146 ID=CK933146; Name=CK933146; organism=Citrus sinensis; type=EST; length=806bpback to top |