CK933156

Overview
NameCK933156
Unique NameCK933156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.224e-17
Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = 3
Query:    9 IGRDPTLWEKPNEFCPERFIG--KEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSR 275
            I  DP +W  P EF P+RF+   K+IDV GH+F+LLPFG+GRR+C G + GL TV   LA+ LH FE   P     E LDM E FGVT ++
Sbjct:  418 IHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPST---EPLDMTEAFGVTNTK 505          
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.598e-17
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 3
Query:    6 AIGRDPTLW-EKPNEFCPERFIG--KEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSRK 278
            A+ RD   W + PNEF PERF+   K +D  G +FELLPFG+GRRMC    LG+  V+   ANLL+ F+W LP  ++ ED+ M+   G+   +K
Sbjct:  395 AVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKK 488          
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.598e-17
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 3
Query:    6 AIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERF 257
            AIGRDP  W+ P +F PERF+  +I+  G  F+ +PFG+GRR+C G  L +  +   LA+L+H F W+LP  V  E LDMEE F
Sbjct:  386 AIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELF 469          
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.598e-17
Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 3
Query:    6 AIGRDPTLWEKPNEFCPERFI----GKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKED----LDMEERFGVTTSR 275
            AIGRDP +WEKP EF PERF+     K     G +F  LPFG+GRR+C G   GL T++  LANL++ F+W++P    KED    + M+E+FG+   R
Sbjct:  428 AIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPN--EKEDGCWKVSMDEKFGLMLRR 523          
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.598e-17
Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 3
Query:    6 AIGRDPTLWEKPNEFCPERFIGK----EIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSRK 278
            A+GRD T WEKP EF PERF+ +    ++ + G +   +PFG+GRR+C G   G  T++  LANL++ F+W++PG+     + MEE FG+T  RK
Sbjct:  433 ALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGS--GAGVSMEESFGLTLRRK 525          
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17
Identity = 40/96 (41.67%), Postives = 62/96 (64.58%), Query Frame = 3
Query:    6 AIGRDPTLWEKPNEFCPERFIGK----EIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRK--EDLDMEERFGVTTSR 275
            A+ RDPT W+K  EF PERF+ +    E+D+ G +   +PFGAGRR+C G    + TV+  LANL++ F+W++P  + +    +DM ++FG+T  R
Sbjct:  423 ALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRR 518          
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17
Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 3
Query:    6 AIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLD 242
            AI RDP LW  P+EF P+RF+   ID  G NFELLPFG+GRR+C G  +G+  V+  L NLL+ F+W LP    KE+ D
Sbjct:  397 AIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLP---EKEEAD 472          
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.726e-17
Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 3
Query:    6 AIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSRKN 281
            A+GRDP  W+    F PERF    ID +G+NFE LPFG GRR+C G + GL      LA LL  F+WKLP  +  +DLD+ E  G++ + K+
Sbjct:  399 ALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMSAASKD 490          
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.036e-16
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 3
Query:    6 AIGRDPTLWEKPNEFCPERFIGKEIDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLP 215
            AI RDP LW  P+EF P+RF+   ID  G NFELLPFG+GRR+C G  +G+  V+  L NLL+ F+W LP
Sbjct:  397 AIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLP 466          
BLAST of CK933156 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.353e-16
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 3
Query:    6 AIGRDPTLWEKPNEFCPERFIGKE-------IDVVGHNFELLPFGAGRRMCVGYALGLITVQSTLANLLHGFEWKLPGNVRKEDLDMEERFGVTTSRKN 281
            A+ R P  W  P EF PERF   +       +D  G  FE +PFG+GRRMC G   GL  ++  +A LL+ F+W LP  +R E+LDM+   G T  R+N
Sbjct:  403 ALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRN 501          
The following BLAST results are available for this feature:
BLAST of CK933156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
C82A4_SOYBN1.224e-1751.65Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C83B1_ARATH1.598e-1745.74Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C80A1_BERST1.598e-1748.81Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71C3_MAIZE1.598e-1746.94Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71C2_MAIZE1.598e-1744.21Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71C1_MAIZE2.087e-1741.67Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71BT_ARATH2.087e-1753.16Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH2.726e-1746.74Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BS_ARATH1.036e-1655.71Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.353e-1642.42Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_H10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933156 ID=CK933156; Name=CK933156; organism=Citrus sinensis; type=EST; length=616bp
GGGGGGCAATAGGGAGAGATCCAACCCTATGGGAGAAACCTAATGAGTTT
TGTCCAGAGAGATTCATCGGAAAAGAGATTGATGTTGTAGGCCATAATTT
TGAGCTACTGCCATTTGGAGCTGGGAGGAGGATGTGTGTTGGTTATGCTC
TAGGGCTAATAACGGTCCAGTCAACTTTGGCAAATCTTTTGCATGGTTTT
GAATGGAAATTGCCTGGTAATGTGAGGAAAGAAGATTTAGATATGGAGGA
AAGATTTGGGGTCACAACGTCCAGAAAAAATCCACTTCTTGTTGTTCCTA
AGCCTCGACTTCCTCTTGATCTATACTCATCGTGATCGGACTTCTTTTCA
CTTAGATATTGTCTGGCTAATCTTTTGCGTAGTTATTGATTTATTATCAA
ATAAAGTTAACCACATCTAGCTGGTTAAAGTTTTCGGTATTTATTAAATA
TCTAAGGCAATAGTCAAGGCAATTGATCTCTATAGTGGAAGTTGATCAGG
TTAATAAATTATGTTGAGAGTATGTGCATGCTCTTTAAAATAAAGCGCAT
TTCATTATTTTGTAATAAATAAATTTTCTTATTAATGAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
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