CK933157

Overview
NameCK933157
Unique NameCK933157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            A TV++ ++I D+I P GW EW G     T  Y E+ N G GA T+ R  W   KV  SAAE +TYT AN++  + W+     P  LGL
Sbjct:  502 ATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 3
Query:    9 TVVMQSDISDVINPAGWYEW-SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTG 248
            TV+M++ I  V+ P+GW  W SG     ++ Y EY+NTG G+D + RVKW+ +K + S AEA  +T A  + G+ W+ +TG
Sbjct:  500 TVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATG 580          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.348e-13
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            A T V+ ++I D+I P GW EW G     T  Y E+ N G GA+T+ RV W+  K+  SAAE + +T AN++  + W+     P  LGL
Sbjct:  498 ATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.373e-13
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALD--TLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAG-STWL 236
            ++TV+MQS I   +NPAGW  W+  +     T+FY EY+N+G G+D S RVKW+ +K I+S  EA  +T   F+ G   W+
Sbjct:  878 SKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 7.459e-13
Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = 3
Query:    9 TVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            TV++ S+I DVI P GW  W G     +  Y EY N G GA T+ RV W   K+  SAAE   +T AN++    W+     P +LGL
Sbjct:  511 TVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12
Identity = 33/81 (40.74%), Postives = 48/81 (59.26%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGST 245
            +RTV +  ++  +I+P GW  W+G+FAL TL+Y EY+NTG G+  S+RV WS+            Y+ ANFI    W  +T
Sbjct:  524 SRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSS---EIPEKHVDVYSVANFIQADEWASTT 601          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.170e-12
Identity = 37/93 (39.78%), Postives = 50/93 (53.76%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTA-----ANFIAGSTWLGSTGFPFSLG 266
            ++ V+M S I  +  P G+  W G+   +T  Y EY N G GADT+ RVKW   KV+TS   A+ Y        N  A  TW+  +G P+SLG
Sbjct:  353 SKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLG 445          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.702e-12
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 3
Query:    9 TVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            TV+M +++ D+I P GW  W G     +  Y EY N G GA  + RV W+  KV  SAAE   +TAAN++    W+     P ++GL
Sbjct:  504 TVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.835e-12
Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWS-GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAG-STWLGSTGFPFSLGL 269
            +RT++MQS I   I P GW  W+  NF  DT +YAEYQN G GA    R+ W  F+   +   AQ +TA  +I     WL     P+  G+
Sbjct:  281 SRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371          
BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.407e-11
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 3
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 269
            A T V+ ++I D+I P GW EW G     T  Y E+ N G GA+ + RV W+  K+  SAAE + +T AN++  + W+        LGL
Sbjct:  485 ATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571          
The following BLAST results are available for this feature:
BLAST of CK933157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
PME37_ARATH3.955e-1442.70Probable pectinesterase/pectinesterase inhibitor V... [more]
PME1_ARATH1.503e-1341.98Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME_BRANA3.348e-1340.45Probable pectinesterase/pectinesterase inhibitor O... [more]
PME26_ARATH4.373e-1343.21Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME5_ARATH7.459e-1341.38Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME64_ARATH1.662e-1240.74Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME_MEDSA2.170e-1239.78Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME4_ARATH3.702e-1239.08Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME_PETIN4.835e-1239.56Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME_BRACM1.407e-1138.20Pectinesterase/pectinesterase inhibitor (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_H11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933157 ID=CK933157; Name=CK933157; organism=Citrus sinensis; type=EST; length=559bp
GGGCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAACCCA
GCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATTGTTTTA
TGCAGAGTATCAAAACACAGGTGCTGGTGCTGACACATCGAATAGGGTGA
AATGGAGCACATTCAAGGTGATTACTAGTGCAGCTGAGGCTCAAACTTAT
ACAGCTGCGAATTTTATTGCAGGGAGTACTTGGCTTGGCTCCACTGGGTT
TCCTTTCTCTCTTGGTCTGTGAATTTGTCATACATAGGCCATAGCTAAGC
TCAGCTGCCTATAAATGTCCTAGCTAGCAATAAATAACACTTGCTCCGCT
AGATGTTTGATGATTTTATTTGTGCGAGTCTGCTCAAGTTTGATGATTTT
ATTTGTGTGAGTCTGCTCGAGTTTGATGTAAGAGATTTATCTCAGCAGGG
AATTATGGATGATGATTGCATGCGTTGCTCCCTAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGAAAAAAAAAAAAAAAAA
AAAAAAAAA
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