CK933157

Overview
NameCK933157
Unique NameCK933157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK933157 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.407e-11
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 3 
Query:    3 ARTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTW 233
            +RTV +  ++  +I P GW  WSG+FAL TL+Y E +NTG G+D S RV WS+            Y+ ANFI    W
Sbjct:  473 SRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSS---QIPDEHVHVYSVANFIQADEW 546
The following BLAST results are available for this feature:
BLAST of CK933157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
PME51_ARATH1.407e-1142.86Probable pectinesterase/pectinesterase inhibitor 5... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_H11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933157 ID=CK933157; Name=CK933157; organism=Citrus sinensis; type=EST; length=559bp
GGGCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAACCCA
GCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATTGTTTTA
TGCAGAGTATCAAAACACAGGTGCTGGTGCTGACACATCGAATAGGGTGA
AATGGAGCACATTCAAGGTGATTACTAGTGCAGCTGAGGCTCAAACTTAT
ACAGCTGCGAATTTTATTGCAGGGAGTACTTGGCTTGGCTCCACTGGGTT
TCCTTTCTCTCTTGGTCTGTGAATTTGTCATACATAGGCCATAGCTAAGC
TCAGCTGCCTATAAATGTCCTAGCTAGCAATAAATAACACTTGCTCCGCT
AGATGTTTGATGATTTTATTTGTGCGAGTCTGCTCAAGTTTGATGATTTT
ATTTGTGTGAGTCTGCTCGAGTTTGATGTAAGAGATTTATCTCAGCAGGG
AATTATGGATGATGATTGCATGCGTTGCTCCCTAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGAAAAAAAAAAAAAAAAA
AAAAAAAAA
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