CK933164

Overview
NameCK933164
Unique NameCK933164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig840 contig Csv1_Contig840:93..940. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933164 vs. ExPASy Swiss-Prot
Match: F108C_CHICK (Abhydrolase domain-containing protein FAM108C1 OS=Gallus gallus GN=FAM108C1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.036e-11
Identity = 52/198 (26.26%), Postives = 89/198 (44.95%), Query Frame = 1
Query:  187 RSSDGVRLHAWFIKLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAK 780
            R++   RL   F++  P  R  T+LF   NA ++         +  R++CNVF   Y GYG S G PS+  +  D  AA + L  R  +    I+++G+S+G      L      + AA+IL +       M+G+ + F            P          + +ID + ++  P+L + G +DE++  SH   +Y +
Sbjct:   94 RTARDNRLGCMFVRCAPTGRY-TLLFSHGNAVDLGQMCSFYIGLGSRINCNVFSYDYSGYGVSTGKPSEKNLYADIDAAWQALRTRYGVSPENIILYGQSIGTVPTVDLASRY--ECAAVILHSPL-----MSGLRVAF------------PDTRKTYCFDAFPSIDKISKVTSPVLVIHGTEDEVIDFSHGLAMYER 271          
BLAST of CK933164 vs. ExPASy Swiss-Prot
Match: F108A_RAT (Abhydrolase domain-containing protein FAM108A OS=Rattus norvegicus GN=Fam108a PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 52/198 (26.26%), Postives = 87/198 (43.94%), Query Frame = 1
Query:  187 RSSDGVRLHAWFIKLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAK 780
            +S+   R+   +++  P  R  T+LF   NA ++         +  R+ CN+F   Y GYG S G PS+  +  D  AA + L  R  I    I+++G+S+G      L      + AA++L +  TS     G+ + F            P          +  I+ V +I  P+L + G +DE++  SH   LY +
Sbjct:   92 KSARANRIACMYVRCVPGARY-TVLFSHGNAVDLGQMCSFYVGLGTRIGCNIFSYDYSGYGISSGRPSEKNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRY--ECAAVVLHSPLTS-----GMRVAF------------PDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYER 269          
BLAST of CK933164 vs. ExPASy Swiss-Prot
Match: F108A_MOUSE (Abhydrolase domain-containing protein FAM108A OS=Mus musculus GN=Fam108a PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 52/198 (26.26%), Postives = 87/198 (43.94%), Query Frame = 1
Query:  187 RSSDGVRLHAWFIKLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAK 780
            +S+   R+   +++  P  R  T+LF   NA ++         +  R+ CN+F   Y GYG S G PS+  +  D  AA + L  R  I    I+++G+S+G      L      + AA++L +  TS     G+ + F            P          +  I+ V +I  P+L + G +DE++  SH   LY +
Sbjct:   92 KSARANRIACMYVRCVPGARY-TVLFSHGNAVDLGQMCSFYVGLGTRIGCNIFSYDYSGYGISSGRPSEKNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRY--ECAAVVLHSPLTS-----GMRVAF------------PDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYER 269          
BLAST of CK933164 vs. ExPASy Swiss-Prot
Match: F18A2_HUMAN (Abhydrolase domain-containing protein FAM108A2/A3 OS=Homo sapiens GN=FAM108A2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.764e-11
Identity = 53/198 (26.77%), Postives = 89/198 (44.95%), Query Frame = 1
Query:  187 RSSDGVRLHAWFIKLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAK 780
            +S+ G R+   +++  P  R  T+LF   NA ++         +  RLHCN+F     GYG S G PS+  +  D  A  + L  R  I    I+++G+S+G      L      + AA++L +  TS     G+ + F         +K     +      +  I+ V +I  P+L + G +DE++  SH   LY +
Sbjct:   92 KSARGNRVSCMYVRCVPGARY-TVLFSHGNAVDLGQMSSFYIGLGSRLHCNIFTYDSSGYGASSGRPSERNLYADIDATWQALRTRYGISPDSIILYGQSIGTVPTMDLASRY--ECAAVVLHSPLTS-----GMRVAF-------RDTKKTYCFD-----AFPNIEKVSKITSPVLIIHGREDEVIDFSHGLALYER 269          
The following BLAST results are available for this feature:
BLAST of CK933164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
F108C_CHICK3.036e-1126.26Abhydrolase domain-containing protein FAM108C1 OS=... [more]
F108A_RAT5.179e-1126.26Abhydrolase domain-containing protein FAM108A OS=R... [more]
F108A_MOUSE5.179e-1126.26Abhydrolase domain-containing protein FAM108A OS=M... [more]
F18A2_HUMAN6.764e-1126.77Abhydrolase domain-containing protein FAM108A2/A3 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933164 ID=CK933164; Name=CK933164; organism=Citrus sinensis; type=EST; length=848bp
GGGGGCAGCATGGTGTCGTTCGTGAATGCATTGTTGTACGGAGTGGGTGG
CATAGTGATGGCCGGGATGGCACTGTTGGTGGCTTTCCAAGAGAAGCTTG
TTTACGTTCCGGTTCTGCCGGGTCTGACCAAATCCTACTCGATTACCCCG
TCCCGGCTCCGGCTTATTTACGAGGATGTCTGGCTCCGATCCTCTGATGG
CGTTCGTCTCCACGCCTGGTTCATCAAGCTTTTTCCCGATTGCCGAGGTC
CAACCATTTTGTTTTTTCAAGAAAATGCTGGCAATATTGCACACCGTCTT
GAAATGGTTCGCATAATGTTACAAAGGTTGCACTGCAATGTATTCATGCT
TTCATATCGTGGTTATGGAGAAAGTGATGGCTATCCTTCTCAGCATGGAA
TTACAAGGGATGCTCAGGCAGCATTGGAGCATCTTTCTCAAAGGACCGAT
ATAGACACGACTAGAATAGTTGTATTTGGGAGATCACTAGGAGGTGCCGT
TGGAGCTGTGCTTACTAAGAATAATCCGGATAAGGTCGCTGCACTGATAC
TGGAGAATACTTTCACATCAATACTGGACATGGCTGGAGTTCTTCTGCCA
TTCCTGAAGTGGTTTATTGGGGGCAGTGGTTCAAAAGGTCCAAGAATTCT
TAATTTTCTTGTACGCTCTCCTTGGAGTACAATTGATGTTGTTGGTGAGA
TTAAGCAGCCAATCCTTTTTCTCTCTGGGTTGCAAGATGAGATGGTTCCT
CCATCACACATGCAAATGCTGTATGCTAAAGCAGCTGCTCGTAACAAGCA
TTGCAAATTTGTGGAATTTCCTACTGGCATGCATATGGATACTTGGTT
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