CK933165

Overview
NameCK933165
Unique NameCK933165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_LISIN (ATP-dependent Clp protease proteolytic subunit OS=Listeria innocua GN=clpP PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45
Identity = 89/171 (52.05%), Postives = 121/171 (70.76%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+SA MAIYD +  V+ADV T+ +GM+AS  S +L  G  GKRFA+PN  +MIHQP+GGA GQ  ++EI AR I+  K+    I++  TG+ +E + +D DRD +M+  EA +Y
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45
Identity = 88/179 (49.16%), Postives = 124/179 (69.27%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P       RG  A D    L ++RIVF+G+ IDD  A+ +I+QLL L+++DP KDI  ++NSPGG +SA MAIYD +Q +++D++TV +G +AS  + +L  G KGKRF++PN+R+MIHQPMGGA GQ  D+ IQA+EI+  KD   +I++  TG+  EQ+Q D DRD +MS  EA  Y
Sbjct:    5 PMVIEQTSRGERAFDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURS3 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp. (strain 383) GN=clpP PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45
Identity = 90/205 (43.90%), Postives = 136/205 (66.34%), Query Frame = 3
Query:  213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D+  S+APQ       G EA A+GL+P                    +ER+VF+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS  + +L  G KGKRFA+PN+RVMIHQP+GGA GQ  D+EIQAREI++ K+   ++++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:    9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAY 206          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURVG (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44
Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 3
Query:  213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D+  S+APQ       G EA A+GL+P                    +ER+VF+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS  + +L  G KGKRFA+PN+RVMIHQP+GGA GQ  D+EIQAREI++ K+    +++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:    9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAKAY 206          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURCM (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=clpP PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44
Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 3
Query:  213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D+  S+APQ       G EA A+GL+P                    +ER+VF+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS  + +L  G KGKRFA+PN+RVMIHQP+GGA GQ  D+EIQAREI++ K+    +++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:    9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAY 206          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURCH (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain HI2424) GN=clpP PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44
Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 3
Query:  213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D+  S+APQ       G EA A+GL+P                    +ER+VF+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS  + +L  G KGKRFA+PN+RVMIHQP+GGA GQ  D+EIQAREI++ K+    +++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:    9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAY 206          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURCA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44
Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 3
Query:  213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D+  S+APQ       G EA A+GL+P                    +ER+VF+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS  + +L  G KGKRFA+PN+RVMIHQP+GGA GQ  D+EIQAREI++ K+    +++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:    9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAY 206          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_STACT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus carnosus (strain TM300) GN=clpP PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.476e-44
Identity = 89/179 (49.72%), Postives = 122/179 (68.16%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P    T  RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L AQD  KDI L++NSPGGS++A  AIYD +Q ++ DV T+ +GM+AS  S +L  G KGKRFA+PN  VMIHQP+GGA GQ  ++EI A  I+  +    +I++  TG+S EQ++KD DRD +++  EA EY
Sbjct:    5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.476e-44
Identity = 85/179 (47.49%), Postives = 129/179 (72.07%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P     + RG  A D    L ++RI+FLG+ +DD VA+ I++QLL L+++DP KDI  ++NSPGG ++A MA+YD +Q ++ DV+TV +G +AS  +L+L  G KGKRF++PN+R+MIHQP+GGA GQ  D++IQA EI+  K+  + I+S  TG++F+++ +D DRD +MS  +A EY
Sbjct:    5 PMVVEQSNRGERAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURTA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=clpP PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.476e-44
Identity = 87/183 (47.54%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P    T+ RG  + D    L +ERIVF+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS  + +L  G KGKR+A+PN RVMIHQP+GGA GQ  D+EIQAREI++ KD    +++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:   14 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAY 196          
The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_LISIN8.655e-4552.05ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DESOH8.655e-4549.16ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURS38.655e-4543.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURVG1.130e-4443.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURCM1.130e-4443.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURCH1.130e-4443.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURCA1.130e-4443.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STACT1.476e-4449.72ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DESAH1.476e-4447.49ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURTA1.476e-4447.54ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTTTTTCTTTGAACACTAATGGATTTGCTTTCAGTCTCTTCCGCT
TCAACCTCTCACCTCCCTTTTTCTCTTTACAAACCCCCCAATTTCTCACT
CTCTAAATCTTTGCCTCTCTCTTTTAAACCCATTTCTTCTGTTAAAACTC
AAAGAATCTCAACCAAAACCCTAGCTCTACAGCAACAGCAACAGCAGCAG
CAATGGCAACACGATGTTCCTTTGTCTTCGGCCCCTCAGACACCGGCCAC
CGCCATGCGCGGCGCCGAAGCCGACGCCATGGGCCTCCTGCCCAGGGAAA
GAATTGTTTTCTTGGGTAATAACATTGACGATTTCGTTGCTGACGCCATC
ATCAGTCAGCTCCTCTTATTGGACGCTCAGGACCCCACCAAAGATATCAG
GCTGTTCGTCAACTCCCCCGGTGGCTCTCTCAGTGCCACAATGGCTATAT
ATGATGTGGTGCAGCTTGTGCGAGCAGACGTGTCCACGGTTGCGCTAGGC
ATGTCAGCATCAACTGCTTCGTTAATTCTTGGTGGTGGGACGAAAGGGAA
GCGGTTTGCAATGCCCAACACTCGGGTAATGATTCATCAGCCTATGGGAG
GAGCTAGTGGGCAAGTATTAGATGTGGAAATTCAAGCAAGAGAAATCATG
CATAACAAGGATAATTTCACAAGAATTATATCTGGTTTTACTGGTCGTTC
GTTTGAGCAAGTGCAAAAGGATATTGATAGGGATCGGTACATGTCTCCGA
TTGAAGCAGTTGAATATGGGATTATTGATGGGAGTATTGATAGAGACAGT
ATTATTCC
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