CK933165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_LISIN (ATP-dependent Clp protease proteolytic subunit OS=Listeria innocua GN=clpP PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45 Identity = 89/171 (52.05%), Postives = 121/171 (70.76%), Query Frame = 3 Query: 258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 RG A D L ++RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+SA MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ ++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +Y Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDY 183
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45 Identity = 88/179 (49.16%), Postives = 124/179 (69.27%), Query Frame = 3 Query: 234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 P RG A D L ++RIVF+G+ IDD A+ +I+QLL L+++DP KDI ++NSPGG +SA MAIYD +Q +++D++TV +G +AS + +L G KGKRF++PN+R+MIHQPMGGA GQ D+ IQA+EI+ KD +I++ TG+ EQ+Q D DRD +MS EA Y Sbjct: 5 PMVIEQTSRGERAFDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAY 183
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURS3 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp. (strain 383) GN=clpP PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45 Identity = 90/205 (43.90%), Postives = 136/205 (66.34%), Query Frame = 3 Query: 213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 D+ S+APQ G EA A+GL+P +ER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ ++++ TG+ E++ +D DRD +MS +A Y Sbjct: 9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAY 206
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURVG (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44 Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 3 Query: 213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 D+ S+APQ G EA A+GL+P +ER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A Y Sbjct: 9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAKAY 206
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURCM (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=clpP PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44 Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 3 Query: 213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 D+ S+APQ G EA A+GL+P +ER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A Y Sbjct: 9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAY 206
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURCH (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain HI2424) GN=clpP PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44 Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 3 Query: 213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 D+ S+APQ G EA A+GL+P +ER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A Y Sbjct: 9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAY 206
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURCA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44 Identity = 90/205 (43.90%), Postives = 135/205 (65.85%), Query Frame = 3 Query: 213 DVPLSSAPQTPATAMRGAEADAMGLLP--------------------RERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 D+ S+APQ G EA A+GL+P +ER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A Y Sbjct: 9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAY 206
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_STACT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus carnosus (strain TM300) GN=clpP PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.476e-44 Identity = 89/179 (49.72%), Postives = 122/179 (68.16%), Query Frame = 3 Query: 234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 P T RG A D L ++RI+ LG+ IDD VA++I+SQLL L AQD KDI L++NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQP+GGA GQ ++EI A I+ + +I++ TG+S EQ++KD DRD +++ EA EY Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKEY 183
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.476e-44 Identity = 85/179 (47.49%), Postives = 129/179 (72.07%), Query Frame = 3 Query: 234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 P + RG A D L ++RI+FLG+ +DD VA+ I++QLL L+++DP KDI ++NSPGG ++A MA+YD +Q ++ DV+TV +G +AS +L+L G KGKRF++PN+R+MIHQP+GGA GQ D++IQA EI+ K+ + I+S TG++F+++ +D DRD +MS +A EY Sbjct: 5 PMVVEQSNRGERAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEY 183
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURTA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=clpP PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.476e-44 Identity = 87/183 (47.54%), Postives = 127/183 (69.40%), Query Frame = 3 Query: 222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767 L P T+ RG + D L +ERIVF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR+A+PN RVMIHQP+GGA GQ D+EIQAREI++ KD +++ TG+ E++ +D DRD +MS +A Y Sbjct: 14 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAY 196 The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bpback to top |