CK933175

Overview
NameCK933175
Unique NameCK933175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CARHZ (GTPase obg OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=obg PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 56/186 (30.11%), Postives = 84/186 (45.16%), Query Frame = 2
Query:   83 SPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVL--RAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQ 634
            SP    PK ++  E   ER +L        +G+VG PN GKSTL + ++       ++PF T+ PN   V + +            +S V A     DI GL+ GAH G GLG+ FL H+     +  VL    FE           DPV D EV+  EL+L + + + + +      M  +N ++
Sbjct:  131 SPTHQAPKFAELGEPGEERWLLLELKLLADVGLVGYPNAGKSTLISRVSAARPKIADYPFTTLTPNLGVVEVGE-----------GQSFVMA-----DIPGLIEGAHAGVGLGHQFLRHVERTRVLLMVLDMSGFE---------GRDPVDDFEVLLKELKLYNEQLLTKPLVIAANKMDTANAQE 291          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_THICR (GTPase obg OS=Thiomicrospira crunogena (strain XCL-2) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 50/152 (32.89%), Postives = 69/152 (45.39%), Query Frame = 2
Query:  101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556
            P+     E   ER +    S    +G++G+PN GKS+L   ++       N+PF T+ PN   V +  E                +   I DI GL+ GA EG GLG  FL H+   G + HV+      DI  + D VDPV  + VI  EL
Sbjct:  138 PRQCTPGEPGDERNLGLELSVLADVGLLGMPNAGKSSLITAVSAARPKVANYPFTTLYPNLGVVRVSPE----------------SSFVIADIPGLIEGASEGAGLGVQFLKHLSRTGLLLHVV------DIAPM-DGVDPVESVHVIEKEL 266          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STRGC (GTPase obg OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 51/171 (29.82%), Postives = 74/171 (43.27%), Query Frame = 2
Query:   74 RALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586
            R  +PK   P+ S++ E   ER +L        +G+VG P+VGKSTL + +T        + F TI PN   V                ++       + D+ GL+ GA +G GLG  FL HI     I HV+        +   +  DP  D   I+ EL   ++  MER
Sbjct:  130 RFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAAKPKIGAYHFTTIVPNLGMV----------------RTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVILHVID-------MSASEGRDPYEDYLAINKELESYNLRLMER 277          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAW (GTPase obg OS=Staphylococcus aureus (strain MW2) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAT (GTPase obg OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAS (GTPase obg OS=Staphylococcus aureus (strain MSSA476) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAR (GTPase obg OS=Staphylococcus aureus (strain MRSA252) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAN (GTPase obg OS=Staphylococcus aureus (strain N315) GN=obg PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAM (GTPase obg OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAE (GTPase obg OS=Staphylococcus aureus (strain Newman) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 306
Match NameE-valueIdentityDescription
OBG_CARHZ2.978e-1230.11GTPase obg OS=Carboxydothermus hydrogenoformans (s... [more]
OBG_THICR3.889e-1232.89GTPase obg OS=Thiomicrospira crunogena (strain XCL... [more]
OBG_STRGC3.889e-1229.82GTPase obg OS=Streptococcus gordonii (strain Chall... [more]
OBG_STAAW3.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain MW2) G... [more]
OBG_STAAT3.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain USA300... [more]
OBG_STAAS3.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain MSSA47... [more]
OBG_STAAR3.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain MRSA25... [more]
OBG_STAAN3.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain N315) ... [more]
OBG_STAAM3.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain Mu50 /... [more]
OBG_STAAE3.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain Newman... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bp
GGGGAGACGCAGACTCAGACTCAGACTCGCATCTTACTTACTCAGTCTGC
AAAACCCTAGGACTAGAAGAAGTAGAGCTCTCTCTCCGAAACTAATGCCG
CCAAAAGCTTCAAAATCCAAAGAAGCGCCAGCTGAGCGCCCCATCCTAGG
CCGATTCTCTTCTCATCTCAAGATTGGCATTGTTGGATTGCCAAATGTTG
GCAAATCTACACTTTTCAACACGCTCACTAAGTTAGCAATACCCGCCGAG
AATTTCCCTTTTTGCACCATCGAGCCCAATGAAGCTCGGGTTAATATCCC
TGATGAGCGATTTGAGTGGCTTTGCCAGTTGTTCAAGCCAAAAAGCGCGG
TTCCAGCTTTCCTGGAGATCCATGATATAGCTGGACTAGTTAGAGGAGCC
CATGAAGGACAAGGTTTGGGCAACAGTTTCTTATCTCACATCCGTGCGGT
TGGCGGAATTTTTCATGTTCTACGTGCATTTGAAGATCCCGACATTATCC
ATGTTGATGACTCTGTCGATCCTGTGAGGGATTTAGAGGTTATAAGTGCA
GAATTACGGCTAAAGGATATTGAATTCATGGAAAGGAGGATTGAAGATGT
TGAGAAGAGCATGAAGAGGAGCAATGACAAACAGTTAAAAATAGAGCATG
AGTTGTGTCAAAGGGTTAAGGCCTGGCTTCAGGATGGAAAAGACGTCCGC
CTTGGGGATTGGAAAGCCGCTGACATTGAGATACTGAATACTTTTCAATT
GCTTACTGCCAAGCCTGTAGTTTACTTGGTTAACATGAATGAGAAGGATT
ACCAAAGAAAGAAAAACAAGTTCTTGCCCAAGATTCACGCTTGGGTTCAA
GAGCATGGGGGCGAACAAATTATTCCTTTCAGTTGTGCGT
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