CK933175

Overview
NameCK933175
Unique NameCK933175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_ECOLI (GTP-dependent nucleic acid-binding protein engD OS=Escherichia coli (strain K12) GN=engD PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 5.744e-48
Identity = 104/240 (43.33%), Postives = 144/240 (60.00%), Query Frame = 2
Query:  170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHGGEQIIPFSCA 889
            K GIVGLPNVGKSTLFN LTK  I A NFPFCTIEPN   V +PD R + L ++ KP+  +P  +E  DIAGLV+GA +G+GLGN FL++IR    I HV+R FE+ +IIHV   V+P  D+EVI+ EL L D++  ER I  V+K  K   DK  K E  + ++    L++   +R  D  A +   +     LT KP +Y+ N+NE  ++   N +L ++   +    G  ++P   A
Sbjct:    4 KCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAK-GGDKDAKAELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFE--NNPYLDQVRE-IAAKEGSVVVPVCAA 239          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_ECO57 (GTP-dependent nucleic acid-binding protein engD OS=Escherichia coli O157:H7 GN=engD PE=3 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 5.744e-48
Identity = 104/240 (43.33%), Postives = 144/240 (60.00%), Query Frame = 2
Query:  170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHGGEQIIPFSCA 889
            K GIVGLPNVGKSTLFN LTK  I A NFPFCTIEPN   V +PD R + L ++ KP+  +P  +E  DIAGLV+GA +G+GLGN FL++IR    I HV+R FE+ +IIHV   V+P  D+EVI+ EL L D++  ER I  V+K  K   DK  K E  + ++    L++   +R  D  A +   +     LT KP +Y+ N+NE  ++   N +L ++   +    G  ++P   A
Sbjct:    4 KCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAK-GGDKDAKAELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFE--NNPYLDQVRE-IAAKEGSVVVPVCAA 239          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: Y026_MYCPN (Probable GTP-binding protein MG024 homolog OS=Mycoplasma pneumoniae GN=MPN_026 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.259e-44
Identity = 103/238 (43.28%), Postives = 143/238 (60.08%), Query Frame = 2
Query:  167 LKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQR-KKNKFLPKIHAWVQEHGGEQIIP 877
            L  GIVGLPNVGKSTLF+ +T L +   N+PF TIEPN   VN+ DER + L  L KP           DIAGLV+GA +G+GLGN FL++IR V  I HV+R +ED  I+HV++ VDPV D E+I  EL   DIE +  RI  +++  + S DKQ K E++L   V   LQ  + V L      D++ L +  LLTAKP++ + N++E D      N  L +++ ++++H     IP
Sbjct:    2 LSAGIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNAGIVNVIDERLDKLASLIKPDKVTHTTFRFVDIAGLVKGASKGEGLGNQFLANIREVDLICHVVRCYEDKKIVHVNNQVDPVFDFEIIVNELIQADIEVVNTRIGKIKRKAE-SGDKQSKEEYQLLAPVLQGLQQNQMV-LHLVNEVDLKKLKSLNLLTAKPILVVANVSEADLSNLDHNPHLTQLNQFLKQHNLPHAIP 237          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_BUCBP (GTP-dependent nucleic acid-binding protein engD OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=engD PE=3 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44
Identity = 94/207 (45.41%), Postives = 137/207 (66.18%), Query Frame = 2
Query:  170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMN 790
            K G VGLPNVGKSTLFN LTKL IPA+N+PFCTI+ N   V + D R   + Q+      +PA +E+ DIAGLV+GA++G+GLGN FL HIR    I H++R FE+  + H+  SVDPVRD+++I+ EL L DIE  + R+  +E + K S++KQ+  E  + ++    L+  K +R  +    +I ++N  +L+T KPVVY+ N++
Sbjct:    4 KCGFVGLPNVGKSTLFNYLTKLNIPADNYPFCTIKSNVGIVPVLDNRLNKIAQVVCSNKIIPATIELVDIAGLVKGAYKGEGLGNQFLDHIRDTNVIMHIVRCFENRYVTHIYGSVDPVRDVQIINLELILSDIEVCKNRMCKLEIN-KLSHNKQVNKELLILKKCVYHLEKSKSLRSLNLTEEEIFVINYLRLITLKPVVYIFNIS 209          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: Y024_MYCGE (Probable GTP-binding protein MG024 OS=Mycoplasma genitalium GN=MG024 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.761e-42
Identity = 96/230 (41.74%), Postives = 142/230 (61.74%), Query Frame = 2
Query:  167 LKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKD-YQRKKNKFLPKIHAWVQE 853
            L  GIVGLPNVGKSTLF+ +T L +   N+PF TIEPN   VN+ DER + L  L  P+  V       DIAGLV+GA +GQGLGN FL++IR V  I HV+R F+D  I+HV++++DPV D E+I  EL   D E +  RI  +++  + S DK  K E  L + V   L+ G+ + +     ++++ + +  LLTAKP++ + N++E D      N+ L K++A++ +
Sbjct:    2 LSAGIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNTGIVNVSDERLDKLASLINPEKIVYTTFRFVDIAGLVKGASQGQGLGNQFLANIREVDLICHVVRCFQDKKIVHVNNTIDPVFDFEIIVNELIQADFELITNRIGKLKRKAE-SGDKIAKEEFVLLEIVLNGLKQGQ-MPIQTLSESELKTIKSLNLLTAKPILIVANVSENDLLNLDNNEALKKLNAFLDQ 229          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_BUCAI (GTP-dependent nucleic acid-binding protein engD OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=engD PE=3 SV=3)

HSP 1 Score: 166.007 bits (419), Expect = 2.585e-40
Identity = 90/230 (39.13%), Postives = 141/230 (61.30%), Query Frame = 2
Query:  170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHG 859
            K GI+GLPNVGKSTLFN LTK      NFPFCTI+PN   V + DER   L Q+  P+  V AF+E  DIAGLV+GA +G+GLGN FL +IR V  I HV+R F+D +I H+ + V P++D+++I++EL L D +  E+ I  ++K     N K+ + +    ++    L+    ++  +    + ++++  + LT KP +Y+ N+NE   +++   FL K++   ++ G
Sbjct:    4 KCGIIGLPNVGKSTLFNLLTKGNSAVANFPFCTIKPNIGIVPVIDERINNLNQIVSPQKTVNAFIEFIDIAGLVKGASQGEGLGNQFLGNIRDVHAIAHVVRCFKDDNITHIYNQVQPIKDIDIINSELILSDFDLCEKTILKLQKKTLLKN-KETQEKINTLKKCLNHLKQFFMLKTLNLNKTEKQLISYLRFLTLKPTMYIANINE---EKESYYFLDKLNEIAKKEG 229          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_BUCAP (GTP-dependent nucleic acid-binding protein engD OS=Buchnera aphidicola subsp. Schizaphis graminum GN=engD PE=3 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 5.758e-40
Identity = 92/241 (38.17%), Postives = 146/241 (60.58%), Query Frame = 2
Query:  170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSM---KRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHGGEQIIPFS 883
            K GI+GLPNVGKSTLFN LTK      NFPFCTI+PN   V++PD R   L ++  PK    AF+E  DIAGLV+GA +G+GLGN FLS+IR    I HV+R F+D ++ H+ + + P  D+++I++EL L D E  E+ I  ++K +   K+  +++L +  +    +K +L     ++  +    + +I++  + LT KP +Y+ N+NE   Q++   FL ++    ++  G  +IP +
Sbjct:    4 KCGIIGLPNVGKSTLFNVLTKGNSAVANFPFCTIKPNIGIVSVPDNRINNLSKIILPKKITNAFIEFVDIAGLVKGASKGEGLGNQFLSNIRDTHAIAHVVRCFKDDNVSHIYNQLQPKIDVDIINSELILADFETCEKSILKLQKKLNFNKKEIEEKLVVLSKCLDHLKKFLM----LKTLELDENEKKIISYLRFLTLKPTMYIANINE---QKESCFFLNELEKMAKKE-GSSVIPIN 236          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: Y1332_METJA (Uncharacterized GTP-binding protein MJ1332 OS=Methanocaldococcus jannaschii GN=MJ1332 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16
Identity = 72/241 (29.88%), Postives = 116/241 (48.13%), Query Frame = 2
Query:  173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI----PDERFEWLCQLFKPKSA-----VPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDII-HVDDSVDPVRDLEVISAELRL-------KDIEFMERRIEDVEKSMKRSNDK--QLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNM-----NEKDYQRKKNKF 823
            IG+VG PNVGKST+FN LT+      N+PF TI+PN+    I    P +     C     K       +P  +E+ D+AGLV GAHEG+G+GN FL  +R       V+ A    D   +  ++ DPV D++ +  E+ +       K+ + + RR +  +  +K   D+   L I+ +    +K  ++D  +  +  W   D+  L       +KP++   N       EK+ +R K +F
Sbjct:    4 IGLVGKPNVGKSTMFNALTEKPAEIGNYPFTTIQPNKGIAYITSPCPCKELGVKCNPRNSKCIDGIRHIP--VEVIDVAGLVPGAHEGRGMGNKFLDDLRQADAFILVVDASGKTDAEGNPTENYDPVEDVKFLLNEIDMWIYSILTKNWDKLARRAQQEKNIVKALKDQLSGLNIDED---DIKMAIRDMDESPI-KWTEEDLLNLAKKLRKISKPMIIAANKADHPDAEKNIERLKKEF 238          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_THETN (GTPase obg OS=Thermoanaerobacter tengcongensis GN=obg PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16
Identity = 72/249 (28.92%), Postives = 112/249 (44.98%), Query Frame = 2
Query:   83 SPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD--IEFMERRIEDVEKSMKRSNDKQLKIEHELCQR------VKAWLQDGKDVRLGDWKAADIEILNTF--QLLTAKPVVYLVNMNEKD 799
            +P L  P+ ++S E   E  +         +G+VG PN GKSTL  + ++      N+PF T+ PN   V              K KS V A     DI GL+ GAH G+GLG+ FL HI     + HV+        +   +  DPV D E I+ ELRL D  +  + + +   +  +    +K  + E E+ +R      + A  ++G D  L       IEIL++   + +   P V + N  E++
Sbjct:  132 TPTLKTPRFAESGEKGREMWVRLELKLLADVGLVGFPNAGKSTLLASCSRARPKIANYPFTTLTPNLGVVE------------HKGKSFVMA-----DIPGLIEGAHRGEGLGHDFLRHIERTKMLIHVVD-------VSGSEGRDPVEDFEKINEELRLYDERLVTLPQIVAANKMDLPEGKEKYPRFEEEIKKRGYEVYPISALTKEGLDALLD----KTIEILSSIPAEKIEEVPEVIVYNPPEEE 352          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: YG4I_YEAST (Uncharacterized GTP-binding protein YGR210C OS=Saccharomyces cerevisiae GN=YGR210C PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 57/142 (40.14%), Postives = 76/142 (53.52%), Query Frame = 2
Query:  173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEA----RVNIPDERF--EWLCQ-----LFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDD-SVDPVRDLEVISAELRL 562
            IGIVG P+ GKST  N+LT        FPF TIEPN+A    +V     RF  E LC+       K K  +P  +++ D+AGLV GAH G+GLGN FL  +R    + HV+      D    +    DP+ D+E +  E+RL
Sbjct:    7 IGIVGKPSSGKSTTLNSLTDAGAAVGAFPFTTIEPNQATGYLQVECACSRFGKEDLCKPNYGWCSKGKRHIP--IKLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDAEGKNTRGYDPLNDIEWLQDEIRL 146          
The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 306
Match NameE-valueIdentityDescription
ENGD_ECOLI5.744e-4843.33GTP-dependent nucleic acid-binding protein engD OS... [more]
ENGD_ECO575.744e-4843.33GTP-dependent nucleic acid-binding protein engD OS... [more]
Y026_MYCPN2.259e-4443.28Probable GTP-binding protein MG024 homolog OS=Myco... [more]
ENGD_BUCBP3.853e-4445.41GTP-dependent nucleic acid-binding protein engD OS... [more]
Y024_MYCGE2.761e-4241.74Probable GTP-binding protein MG024 OS=Mycoplasma g... [more]
ENGD_BUCAI2.585e-4039.13GTP-dependent nucleic acid-binding protein engD OS... [more]
ENGD_BUCAP5.758e-4038.17GTP-dependent nucleic acid-binding protein engD OS... [more]
Y1332_METJA5.798e-1629.88Uncharacterized GTP-binding protein MJ1332 OS=Meth... [more]
OBG_THETN5.798e-1628.92GTPase obg OS=Thermoanaerobacter tengcongensis GN=... [more]
YG4I_YEAST1.292e-1540.14Uncharacterized GTP-binding protein YGR210C OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bp
GGGGAGACGCAGACTCAGACTCAGACTCGCATCTTACTTACTCAGTCTGC
AAAACCCTAGGACTAGAAGAAGTAGAGCTCTCTCTCCGAAACTAATGCCG
CCAAAAGCTTCAAAATCCAAAGAAGCGCCAGCTGAGCGCCCCATCCTAGG
CCGATTCTCTTCTCATCTCAAGATTGGCATTGTTGGATTGCCAAATGTTG
GCAAATCTACACTTTTCAACACGCTCACTAAGTTAGCAATACCCGCCGAG
AATTTCCCTTTTTGCACCATCGAGCCCAATGAAGCTCGGGTTAATATCCC
TGATGAGCGATTTGAGTGGCTTTGCCAGTTGTTCAAGCCAAAAAGCGCGG
TTCCAGCTTTCCTGGAGATCCATGATATAGCTGGACTAGTTAGAGGAGCC
CATGAAGGACAAGGTTTGGGCAACAGTTTCTTATCTCACATCCGTGCGGT
TGGCGGAATTTTTCATGTTCTACGTGCATTTGAAGATCCCGACATTATCC
ATGTTGATGACTCTGTCGATCCTGTGAGGGATTTAGAGGTTATAAGTGCA
GAATTACGGCTAAAGGATATTGAATTCATGGAAAGGAGGATTGAAGATGT
TGAGAAGAGCATGAAGAGGAGCAATGACAAACAGTTAAAAATAGAGCATG
AGTTGTGTCAAAGGGTTAAGGCCTGGCTTCAGGATGGAAAAGACGTCCGC
CTTGGGGATTGGAAAGCCGCTGACATTGAGATACTGAATACTTTTCAATT
GCTTACTGCCAAGCCTGTAGTTTACTTGGTTAACATGAATGAGAAGGATT
ACCAAAGAAAGAAAAACAAGTTCTTGCCCAAGATTCACGCTTGGGTTCAA
GAGCATGGGGGCGAACAAATTATTCCTTTCAGTTGTGCGT
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