CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_ECOLI (GTP-dependent nucleic acid-binding protein engD OS=Escherichia coli (strain K12) GN=engD PE=1 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 5.744e-48 Identity = 104/240 (43.33%), Postives = 144/240 (60.00%), Query Frame = 2 Query: 170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHGGEQIIPFSCA 889 K GIVGLPNVGKSTLFN LTK I A NFPFCTIEPN V +PD R + L ++ KP+ +P +E DIAGLV+GA +G+GLGN FL++IR I HV+R FE+ +IIHV V+P D+EVI+ EL L D++ ER I V+K K DK K E + ++ L++ +R D A + + LT KP +Y+ N+NE ++ N +L ++ + G ++P A Sbjct: 4 KCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAK-GGDKDAKAELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFE--NNPYLDQVRE-IAAKEGSVVVPVCAA 239
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_ECO57 (GTP-dependent nucleic acid-binding protein engD OS=Escherichia coli O157:H7 GN=engD PE=3 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 5.744e-48 Identity = 104/240 (43.33%), Postives = 144/240 (60.00%), Query Frame = 2 Query: 170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHGGEQIIPFSCA 889 K GIVGLPNVGKSTLFN LTK I A NFPFCTIEPN V +PD R + L ++ KP+ +P +E DIAGLV+GA +G+GLGN FL++IR I HV+R FE+ +IIHV V+P D+EVI+ EL L D++ ER I V+K K DK K E + ++ L++ +R D A + + LT KP +Y+ N+NE ++ N +L ++ + G ++P A Sbjct: 4 KCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAK-GGDKDAKAELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFE--NNPYLDQVRE-IAAKEGSVVVPVCAA 239
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: Y026_MYCPN (Probable GTP-binding protein MG024 homolog OS=Mycoplasma pneumoniae GN=MPN_026 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.259e-44 Identity = 103/238 (43.28%), Postives = 143/238 (60.08%), Query Frame = 2 Query: 167 LKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQR-KKNKFLPKIHAWVQEHGGEQIIP 877 L GIVGLPNVGKSTLF+ +T L + N+PF TIEPN VN+ DER + L L KP DIAGLV+GA +G+GLGN FL++IR V I HV+R +ED I+HV++ VDPV D E+I EL DIE + RI +++ + S DKQ K E++L V LQ + V L D++ L + LLTAKP++ + N++E D N L +++ ++++H IP Sbjct: 2 LSAGIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNAGIVNVIDERLDKLASLIKPDKVTHTTFRFVDIAGLVKGASKGEGLGNQFLANIREVDLICHVVRCYEDKKIVHVNNQVDPVFDFEIIVNELIQADIEVVNTRIGKIKRKAE-SGDKQSKEEYQLLAPVLQGLQQNQMV-LHLVNEVDLKKLKSLNLLTAKPILVVANVSEADLSNLDHNPHLTQLNQFLKQHNLPHAIP 237
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_BUCBP (GTP-dependent nucleic acid-binding protein engD OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=engD PE=3 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44 Identity = 94/207 (45.41%), Postives = 137/207 (66.18%), Query Frame = 2 Query: 170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMN 790 K G VGLPNVGKSTLFN LTKL IPA+N+PFCTI+ N V + D R + Q+ +PA +E+ DIAGLV+GA++G+GLGN FL HIR I H++R FE+ + H+ SVDPVRD+++I+ EL L DIE + R+ +E + K S++KQ+ E + ++ L+ K +R + +I ++N +L+T KPVVY+ N++ Sbjct: 4 KCGFVGLPNVGKSTLFNYLTKLNIPADNYPFCTIKSNVGIVPVLDNRLNKIAQVVCSNKIIPATIELVDIAGLVKGAYKGEGLGNQFLDHIRDTNVIMHIVRCFENRYVTHIYGSVDPVRDVQIINLELILSDIEVCKNRMCKLEIN-KLSHNKQVNKELLILKKCVYHLEKSKSLRSLNLTEEEIFVINYLRLITLKPVVYIFNIS 209
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: Y024_MYCGE (Probable GTP-binding protein MG024 OS=Mycoplasma genitalium GN=MG024 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.761e-42 Identity = 96/230 (41.74%), Postives = 142/230 (61.74%), Query Frame = 2 Query: 167 LKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKD-YQRKKNKFLPKIHAWVQE 853 L GIVGLPNVGKSTLF+ +T L + N+PF TIEPN VN+ DER + L L P+ V DIAGLV+GA +GQGLGN FL++IR V I HV+R F+D I+HV++++DPV D E+I EL D E + RI +++ + S DK K E L + V L+ G+ + + ++++ + + LLTAKP++ + N++E D N+ L K++A++ + Sbjct: 2 LSAGIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNTGIVNVSDERLDKLASLINPEKIVYTTFRFVDIAGLVKGASQGQGLGNQFLANIREVDLICHVVRCFQDKKIVHVNNTIDPVFDFEIIVNELIQADFELITNRIGKLKRKAE-SGDKIAKEEFVLLEIVLNGLKQGQ-MPIQTLSESELKTIKSLNLLTAKPILIVANVSENDLLNLDNNEALKKLNAFLDQ 229
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_BUCAI (GTP-dependent nucleic acid-binding protein engD OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=engD PE=3 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 2.585e-40 Identity = 90/230 (39.13%), Postives = 141/230 (61.30%), Query Frame = 2 Query: 170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHG 859 K GI+GLPNVGKSTLFN LTK NFPFCTI+PN V + DER L Q+ P+ V AF+E DIAGLV+GA +G+GLGN FL +IR V I HV+R F+D +I H+ + V P++D+++I++EL L D + E+ I ++K N K+ + + ++ L+ ++ + + ++++ + LT KP +Y+ N+NE +++ FL K++ ++ G Sbjct: 4 KCGIIGLPNVGKSTLFNLLTKGNSAVANFPFCTIKPNIGIVPVIDERINNLNQIVSPQKTVNAFIEFIDIAGLVKGASQGEGLGNQFLGNIRDVHAIAHVVRCFKDDNITHIYNQVQPIKDIDIINSELILSDFDLCEKTILKLQKKTLLKN-KETQEKINTLKKCLNHLKQFFMLKTLNLNKTEKQLISYLRFLTLKPTMYIANINE---EKESYYFLDKLNEIAKKEG 229
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: ENGD_BUCAP (GTP-dependent nucleic acid-binding protein engD OS=Buchnera aphidicola subsp. Schizaphis graminum GN=engD PE=3 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 5.758e-40 Identity = 92/241 (38.17%), Postives = 146/241 (60.58%), Query Frame = 2 Query: 170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSM---KRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNMNEKDYQRKKNKFLPKIHAWVQEHGGEQIIPFS 883 K GI+GLPNVGKSTLFN LTK NFPFCTI+PN V++PD R L ++ PK AF+E DIAGLV+GA +G+GLGN FLS+IR I HV+R F+D ++ H+ + + P D+++I++EL L D E E+ I ++K + K+ +++L + + +K +L ++ + + +I++ + LT KP +Y+ N+NE Q++ FL ++ ++ G +IP + Sbjct: 4 KCGIIGLPNVGKSTLFNVLTKGNSAVANFPFCTIKPNIGIVSVPDNRINNLSKIILPKKITNAFIEFVDIAGLVKGASKGEGLGNQFLSNIRDTHAIAHVVRCFKDDNVSHIYNQLQPKIDVDIINSELILADFETCEKSILKLQKKLNFNKKEIEEKLVVLSKCLDHLKKFLM----LKTLELDENEKKIISYLRFLTLKPTMYIANINE---QKESCFFLNELEKMAKKE-GSSVIPIN 236
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: Y1332_METJA (Uncharacterized GTP-binding protein MJ1332 OS=Methanocaldococcus jannaschii GN=MJ1332 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16 Identity = 72/241 (29.88%), Postives = 116/241 (48.13%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI----PDERFEWLCQLFKPKSA-----VPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDII-HVDDSVDPVRDLEVISAELRL-------KDIEFMERRIEDVEKSMKRSNDK--QLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAKPVVYLVNM-----NEKDYQRKKNKF 823 IG+VG PNVGKST+FN LT+ N+PF TI+PN+ I P + C K +P +E+ D+AGLV GAHEG+G+GN FL +R V+ A D + ++ DPV D++ + E+ + K+ + + RR + + +K D+ L I+ + +K ++D + + W D+ L +KP++ N EK+ +R K +F Sbjct: 4 IGLVGKPNVGKSTMFNALTEKPAEIGNYPFTTIQPNKGIAYITSPCPCKELGVKCNPRNSKCIDGIRHIP--VEVIDVAGLVPGAHEGRGMGNKFLDDLRQADAFILVVDASGKTDAEGNPTENYDPVEDVKFLLNEIDMWIYSILTKNWDKLARRAQQEKNIVKALKDQLSGLNIDED---DIKMAIRDMDESPI-KWTEEDLLNLAKKLRKISKPMIIAANKADHPDAEKNIERLKKEF 238
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_THETN (GTPase obg OS=Thermoanaerobacter tengcongensis GN=obg PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16 Identity = 72/249 (28.92%), Postives = 112/249 (44.98%), Query Frame = 2 Query: 83 SPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD--IEFMERRIEDVEKSMKRSNDKQLKIEHELCQR------VKAWLQDGKDVRLGDWKAADIEILNTF--QLLTAKPVVYLVNMNEKD 799 +P L P+ ++S E E + +G+VG PN GKSTL + ++ N+PF T+ PN V K KS V A DI GL+ GAH G+GLG+ FL HI + HV+ + + DPV D E I+ ELRL D + + + + + + +K + E E+ +R + A ++G D L IEIL++ + + P V + N E++ Sbjct: 132 TPTLKTPRFAESGEKGREMWVRLELKLLADVGLVGFPNAGKSTLLASCSRARPKIANYPFTTLTPNLGVVE------------HKGKSFVMA-----DIPGLIEGAHRGEGLGHDFLRHIERTKMLIHVVD-------VSGSEGRDPVEDFEKINEELRLYDERLVTLPQIVAANKMDLPEGKEKYPRFEEEIKKRGYEVYPISALTKEGLDALLD----KTIEILSSIPAEKIEEVPEVIVYNPPEEE 352
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: YG4I_YEAST (Uncharacterized GTP-binding protein YGR210C OS=Saccharomyces cerevisiae GN=YGR210C PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15 Identity = 57/142 (40.14%), Postives = 76/142 (53.52%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEA----RVNIPDERF--EWLCQ-----LFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDD-SVDPVRDLEVISAELRL 562 IGIVG P+ GKST N+LT FPF TIEPN+A +V RF E LC+ K K +P +++ D+AGLV GAH G+GLGN FL +R + HV+ D + DP+ D+E + E+RL Sbjct: 7 IGIVGKPSSGKSTTLNSLTDAGAAVGAFPFTTIEPNQATGYLQVECACSRFGKEDLCKPNYGWCSKGKRHIP--IKLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDAEGKNTRGYDPLNDIEWLQDEIRL 146 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |