CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_NATTJ (GTPase obg OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=obg PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15 Identity = 54/173 (31.21%), Postives = 89/173 (51.45%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPD-ERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +R +PK P+ S+ + E+ I+ ++G++G PNVGKSTL + +TK + +++ F T+ PN V + + RF + DI GL+ GAH+G+GLG+ FL HI + HV+ DI ++ DPV D+E I+ EL+ + M++ Sbjct: 127 TRFANPKNKAPRFSEDGKPGEEKWIVLELKVMAEVGLIGYPNVGKSTLLSQVTKASPKIDSYHFTTLNPNLGVVELEEGSRF-----------------VMADIPGLIEGAHQGRGLGDQFLRHIERTKMLIHVI------DIASIEGR-DPVLDIETINEELKGYNSRVMDK 275
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_THEPX (GTPase obg OS=Thermoanaerobacter sp. (strain X514) GN=obg PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15 Identity = 53/160 (33.12%), Postives = 75/160 (46.88%), Query Frame = 2 Query: 83 SPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRL 562 +P L P+ ++S E E + +G++G PN GKSTL + T+ N+PF T+ PN V K KS V A DI GL+ GAH G+GLG+ FL HI + HV+ + + DP+ D E I+ EL+L Sbjct: 131 TPTLKTPRFAESGEKGKEMWVRLELKLLADVGLIGFPNAGKSTLLASCTRAKPKIANYPFTTLTPNLGVVE------------HKGKSFVMA-----DIPGLIEGAHRGEGLGHDFLRHIERTKMLIHVVD-------VSASEGRDPIEDFEKINEELKL 266
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_THEP3 (GTPase obg OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=obg PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15 Identity = 53/160 (33.12%), Postives = 75/160 (46.88%), Query Frame = 2 Query: 83 SPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRL 562 +P L P+ ++S E E + +G++G PN GKSTL + T+ N+PF T+ PN V K KS V A DI GL+ GAH G+GLG+ FL HI + HV+ + + DP+ D E I+ EL+L Sbjct: 131 TPTLKTPRFAESGEKGKEMWVRLELKLLADVGLIGFPNAGKSTLLASCTRAKPKIANYPFTTLTPNLGVVE------------HKGKSFVMA-----DIPGLIEGAHRGEGLGHDFLRHIERTKMLIHVVD-------VSASEGRDPIEDFEKINEELKL 266
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_POLSQ (GTPase obg OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=obg PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15 Identity = 48/138 (34.78%), Postives = 73/138 (52.90%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKSTL ++ ++PF T+ PN V + +ER +F+ I DI GL+ GA EG GLG+ FL H++ G + H++ DI D+++DPV D I ELR D +E+ Sbjct: 162 VGLLGMPNAGKSTLITAVSNARPKIADYPFTTLHPNLGVVRVGNER---------------SFV-IADIPGLIEGAAEGAGLGHRFLRHLQRTGVLLHLV------DIAPFDENIDPVADAVAIVNELRKYDEALVEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CLOTH (GTPase obg OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=obg PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14 Identity = 56/168 (33.33%), Postives = 79/168 (47.02%), Query Frame = 2 Query: 83 SPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +P P +K E E ++ +G++G PNVGKST+ + +T N+ F TI PN VNI E AF+ + DI GL+ GAH+G GLG+ FL HI + HV+ I + DPV+D EVI+ EL+ + ER Sbjct: 131 TPTRQVPSFAKPGEPGEELWVILELKLLADVGLIGFPNVGKSTILSMVTAAQPKIANYHFTTINPNLGVVNIDAEN---------------AFV-MADIPGLIEGAHQGVGLGHEFLKHIERTKLLIHVVD-------ISGSEGRDPVQDFEVINEELKKYNPVLCER 275
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_THEM4 (GTPase obg OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=obg PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 56/188 (29.79%), Postives = 87/188 (46.28%), Query Frame = 2 Query: 83 SPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHV--LRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLK 640 S + PK S+ ER ++ +G+VG PNVGKS+ + ++ N+PF T+ PN V + D +F + DI GL++GA +G GLGN FL H+ I H+ + FE D V+D D R+LE S +L K+ + +I+ + K ++LK Sbjct: 135 SSTMRTPKISERGAEGEERKLILELKLLADVGLVGYPNVGKSSFISKISNAKPKIANYPFTTLIPNLGVVQVDDLQF-----------------VVADIPGLIKGASKGVGLGNVFLRHVERCSVIVHIVDISGFEGRD--PVNDYFDIRRELEYFSEDLAKKEEIIVANKIDLLSKEELEERIQKLK 303
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_POLNS (GTPase obg OS=Polynucleobacter necessarius (strain STIR1) GN=obg PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14 Identity = 49/138 (35.51%), Postives = 71/138 (51.45%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKSTL ++ ++PF T+ PN V + ER +F+ I DI GL+ GA EG GLG+ FL H++ G + H++ DI D +VDPV D I ELR D +E+ Sbjct: 162 VGLLGMPNAGKSTLITAVSNARPKIADYPFTTLHPNLGVVRVGSER---------------SFV-IADIPGLIEGAAEGAGLGHRFLRHLQRTGVLLHLV------DIAPFDANVDPVADAAAIVNELRKYDEALVEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CHRVO (GTPase obg OS=Chromobacterium violaceum GN=obg PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 57/180 (31.67%), Postives = 86/180 (47.78%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEF--MERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLG 706 +G++G+PN GKST +++ ++PF T+ PN V + D R +F+ I DI GL+ GA EG GLG+ FL H++ G + HV+ DI D VDPVR+ I EL+ D E R + + M ++++L + L W Q+ D LG Sbjct: 162 VGLLGMPNAGKSTFIRSVSAARPKVADYPFTTLHPNLGVVRMDDTR---------------SFV-IADIPGLIEGAAEGAGLGHRFLKHLQRTGLLLHVV------DIAPFDPDVDPVREARAIVEELKKFDEELHGKPRWLVLNKVDMLPEDERELTVSAFL--NAYGWPQERPDDSLG 317
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_DESHY (GTPase obg OS=Desulfitobacterium hafniense (strain Y51) GN=obg PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.427e-14 Identity = 70/231 (30.30%), Postives = 102/231 (44.16%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAK 763 +R +S P +++ E ER +L +G+VG PNVGKST+ + ++ ++ F T+ PN V + D +F+ + DI GL+ GAH G GLG+ FL H IFHVL DI ++ DP+ D ++I+ ELR E R I V +N + E QR+ L G+D R+ AA E L AK Sbjct: 127 ARFMSNTNKAPTVAENGEPGEERNLLLELKLLADVGLVGFPNVGKSTIISRISAAKPKIADYHFTTLVPNLGVVELEDGE---------------SFV-VADIPGLIEGAHTGAGLGHEFLRHTERTRLIFHVL------DIAGSEER-DPLEDFQIIAEELRQYSQELANRPILIV------ANKMDIPGAEENLQRLTEKL--GEDYRIFPVSAATGEGLKELVYAAAK 326
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_ACIC5 (GTPase obg OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=obg PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.427e-14 Identity = 53/166 (31.93%), Postives = 78/166 (46.99%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVK 670 IGIVG PNVGKSTL + ++ ++PF T+EPN V + + E + DI GL+ GAHEG GLG+ FL H+ + H++ D+ DPV D + I+AEL E ++ + V + N +LK + +R K Sbjct: 161 IGIVGYPNVGKSTLISRISAAKPKIADYPFTTLEPNLGVVTVGEMPHE-------------ETFVVADIPGLIEGAHEGAGLGDRFLRHVERTHLLVHLV------DVSDASGRPDPVADYKTIAAELANFGGELEDKPVIVVASKIDSVNPDKLKKLAAMAKRRK 307 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |