CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURVG (GTPase obg OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=obg PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.087e-14 Identity = 52/160 (32.50%), Postives = 79/160 (49.38%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+SVDPV + + I ELR D E+ Sbjct: 141 KTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPSKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGVLLHLV------DLAPFDESVDPVAEAKAIVGELRKYDEALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_NEIM0 (GTPase obg OS=Neisseria meningitidis serogroup C (strain 053442) GN=obg PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14 Identity = 52/158 (32.91%), Postives = 73/158 (46.20%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIE 574 PK S E R + +G++G+PN GKSTL ++ N+PF T+ PN V I DE ++ + DI GL+ GA EG GLG+ FL H+ G + HV+ D+ D++VDP + I ELR D E Sbjct: 138 PKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRI-DENHSFV---------------MADIPGLIEGAAEGAGLGHRFLKHLSRTGLLLHVV------DLAPFDEAVDPAEEALAIINELRKYDEE 273
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURS3 (GTPase obg OS=Burkholderia sp. (strain 383) GN=obg PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+SVDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVSNARPKIADYPFTTLAPNLGVVRVGPSKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGVLLHLV------DLAPFDESVDPVAEATAIVGELRKYDEALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURP8 (GTPase obg OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=obg PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13 Identity = 45/138 (32.61%), Postives = 72/138 (52.17%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKST ++++ ++PF T+ PN V + R +F+ I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D++VDPV + + I ELR D E + Sbjct: 162 VGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPSR---------------SFV-IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHIV------DLAPFDETVDPVAEAKAIVNELRKYDEELFSK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURCJ (GTPase obg OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=obg PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+SVDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPSKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGVLLHLV------DLAPFDESVDPVAEATAIVGELRKYDEALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURCH (GTPase obg OS=Burkholderia cenocepacia (strain HI2424) GN=obg PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+SVDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPSKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGVLLHLV------DLAPFDESVDPVAEATAIVGELRKYDEALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURCC (GTPase obg OS=Burkholderia cenocepacia (strain MC0-3) GN=obg PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+SVDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPSKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGVLLHLV------DLAPFDESVDPVAEATAIVGELRKYDEALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURCA (GTPase obg OS=Burkholderia cenocepacia (strain AU 1054) GN=obg PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+SVDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPSKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGVLLHLV------DLAPFDESVDPVAEATAIVGELRKYDEALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_ROSS1 (GTPase obg OS=Roseiflexus sp. (strain RS-1) GN=obg PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13 Identity = 53/162 (32.72%), Postives = 72/162 (44.44%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 P+ ++ E R I +G+VG PN GKSTL + ++ +PF T++PN V + D F + DI GL+ GAH G GLG SFL HI + H++ D VD DPV D I+ ELRL E +R Sbjct: 141 PRIAELGEPGERREIELELKLLADVGLVGFPNAGKSTLLSVISAARPKIAPYPFTTLQPNLGVVEVGDYSF-----------------VVADIPGLIEGAHRGVGLGFSFLRHIERTRLLIHII------DAAGVDGR-DPVGDFHAINEELRLYQPELAQR 278
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURXL (GTPase obg OS=Burkholderia xenovorans (strain LB400) GN=obg PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13 Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD 568 +G++G+PN GKST ++++ ++PF T+ PN V + R +F+ I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+SVDPV + + I ELR D Sbjct: 162 VGLLGMPNAGKSTFISSVSNARPKIADYPFTTLAPNLGVVRVGPSR---------------SFV-IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHIV------DLAPFDESVDPVAEAKAIVNELRKYD 271 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |