CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CORGB (GTPase obg OS=Corynebacterium glutamicum (strain R) GN=obg PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 48/159 (30.19%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 107 ASKSKEAPA---------ERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556 ASK+++AP ++ S +G+VG P+ GKS+L + ++ ++PF T++PN VN+ E F + D+ GL+ GA EG+GLG FL HI + HV+ D +D DP+ D+E + AEL Sbjct: 131 ASKARKAPGFALIGEPGEAHDLILELKSMADVGLVGFPSAGKSSLISVMSAAKPKIGDYPFTTLQPNLGVVNVGHETF-----------------TMADVPGLIPGASEGKGLGLDFLRHIERTSVLVHVV------DTATMDPGRDPISDIEALEAEL 266
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURPP (GTPase obg OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=obg PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 45/132 (34.09%), Postives = 69/132 (52.27%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD 568 +G++G+PN GKST +++ ++PF T+ PN V + R +F+ I DI GL+ GA EG GLG+ FL H++ G + H++ D+ DD+VDPV + + I ELR D Sbjct: 162 VGLLGMPNAGKSTFIASVSNAKPKIADYPFTTLAPNLGVVRVGPSR---------------SFV-IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHIV------DLAPFDDAVDPVAEAKAIVNELRKYD 271
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURM1 (GTPase obg OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=obg PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 52/160 (32.50%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ DI D+ VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPSKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DIAPFDEGVDPVAEATAIVGELRKYDEALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_AQUAE (GTPase obg OS=Aquifex aeolicus GN=obg PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 60/219 (27.40%), Postives = 104/219 (47.49%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRA--FEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDV-EKSMKRSNDKQLKIEHELCQRVKAWLQDG-KDVRLGDWK 715 +R +P P ++ + ER I+ +G+VG PN GKSTL + LT+ ++PF T+ PN + + ER L I DI GL+ AH+G GLG+ FL HI + HV+ F + + + ++++ R+LE+ S +L K + +I+ + ++S+ +K K + V A +G ++++ G WK Sbjct: 129 ARFATPTNQAPTYAEKGQKGEERWIILELKLIADVGLVGFPNAGKSTLLSRLTRAKPKIADYPFTTLSPNLGVMELDWER----------------RLVIADIPGLIEDAHKGAGLGHEFLRHIERTKFLAHVIDVSDFREREPVQAFEAIN--RELELYSPKLAQKPQIVVANKIDALSDRSLLSELEKYFKEKGYEFYAVSALTGEGIEELKEGLWK 329
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_NEIMF (GTPase obg OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=obg PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIE 574 PK S E R + +G++G+PN GKSTL ++ N+PF T+ PN V I DE ++ + DI GL+ GA EG GLG+ FL H+ G + HV+ D+ D++V+P + I ELR D E Sbjct: 138 PKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRI-DENHSFV---------------MADIPGLIEGAAEGAGLGHRFLKHLSRTGLLLHVV------DLAPFDETVNPAEEALAIINELRKYDEE 273
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_NEIMB (GTPase obg OS=Neisseria meningitidis serogroup B GN=obg PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIE 574 PK S E R + +G++G+PN GKSTL ++ N+PF T+ PN V I DE ++ + DI GL+ GA EG GLG+ FL H+ G + HV+ D+ D++V+P + I ELR D E Sbjct: 138 PKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRI-DENHSFV---------------MADIPGLIEGAAEGAGLGHRFLKHLSRTGLLLHVV------DLAPFDETVNPAEEALAIINELRKYDEE 273
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_NEIMA (GTPase obg OS=Neisseria meningitidis serogroup A GN=obg PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIE 574 PK S E R + +G++G+PN GKSTL ++ N+PF T+ PN V I DE ++ + DI GL+ GA EG GLG+ FL H+ G + HV+ D+ D++V+P + I ELR D E Sbjct: 138 PKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRI-DENHSFV---------------MADIPGLIEGAAEGAGLGHRFLKHLSRTGLLLHVV------DLAPFDETVNPAEEALAIINELRKYDEE 273
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_NEIG2 (GTPase obg OS=Neisseria gonorrhoeae (strain NCCP11945) GN=obg PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIE 574 PK S E R + +G++G+PN GKSTL ++ N+PF T+ PN V I DE ++ + DI GL+ GA EG GLG+ FL H+ G + HV+ D+ D++V+P + I ELR D E Sbjct: 138 PKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRI-DENHSFV---------------MADIPGLIEGAAEGAGLGHRFLKHLSRTGLLLHVV------DLAPFDETVNPAEEALAIINELRKYDEE 273
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_NEIG1 (GTPase obg OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=obg PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIE 574 PK S E R + +G++G+PN GKSTL ++ N+PF T+ PN V I DE ++ + DI GL+ GA EG GLG+ FL H+ G + HV+ D+ D++V+P + I ELR D E Sbjct: 138 PKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRI-DENHSFV---------------MADIPGLIEGAAEGAGLGHRFLKHLSRTGLLLHVV------DLAPFDETVNPAEEALAIINELRKYDEE 273
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_GEOUR (GTPase obg OS=Geobacter uraniireducens (strain Rf4) GN=obg PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERR 589 PK ++ E ER + +G++G+P+VGKS+L + ++ ++ F T++PN V + KS V A DI GL+ GAHEG GLG+ FL H+ G + H+L DI + D DP+R+ E I+ EL L + E E++ Sbjct: 138 PKFAQPGEPGEERWLRLELKLMADVGLLGMPSVGKSSLISKISAARPKIADYHFTTLKPNLGVVAYKNY-----------KSFVMA-----DIPGLIEGAHEGAGLGHRFLKHLERTGQLIHIL------DISWMPDR-DPLREYEAINRELALFNPELAEKK 277 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |