CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURMS (GTPase obg OS=Burkholderia mallei (strain SAVP1) GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 51/160 (31.87%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+ VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPGKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DLAPFDERVDPVAEARAIVGELRKYDESLYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURMA (GTPase obg OS=Burkholderia mallei GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 51/160 (31.87%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+ VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPGKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DLAPFDERVDPVAEARAIVGELRKYDESLYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURM9 (GTPase obg OS=Burkholderia mallei (strain NCTC 10229) GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 51/160 (31.87%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+ VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPGKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DLAPFDERVDPVAEARAIVGELRKYDESLYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURM7 (GTPase obg OS=Burkholderia mallei (strain NCTC 10247) GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 51/160 (31.87%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+ VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPGKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DLAPFDERVDPVAEARAIVGELRKYDESLYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_RICCN (GTPase obg OS=Rickettsia conorii GN=obg PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13 Identity = 46/143 (32.17%), Postives = 67/143 (46.85%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDV 601 +G+VGLPN GKST + +T ++PF T+ PN V + DE F I DI GL+ GAH+G GLG+ FL HI + H++ S D V D + EL L ++++ +IE + Sbjct: 162 VGLVGLPNAGKSTFLSVVTAAKPKIADYPFTTLVPNLGVVYVDDEEF-----------------VIADIPGLIEGAHQGHGLGDKFLKHIERCNVLIHLIDG----------SSNDVVADYNTVRLELELYS-DYLKNKIETI 276
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_RALEJ (GTPase obg OS=Ralstonia eutropha (strain JMP134) GN=obg PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13 Identity = 42/132 (31.82%), Postives = 70/132 (53.03%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD 568 +G++G+PN GKST + ++ ++PF T+ PN V + E+ +F+ + DI GL+ GA EG GLG+ FL H++ G + H++ D+ D++VDPV + + I EL+ D Sbjct: 162 VGLLGMPNAGKSTFISHISNARPKVADYPFTTLHPNLGVVRVDHEQ---------------SFV-VADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHIV------DLAPFDEAVDPVAEAKAIVNELKKYD 271
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_RALEH (GTPase obg OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=obg PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13 Identity = 42/132 (31.82%), Postives = 70/132 (53.03%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD 568 +G++G+PN GKST + ++ ++PF T+ PN V + E+ +F+ + DI GL+ GA EG GLG+ FL H++ G + H++ D+ D++VDPV + + I EL+ D Sbjct: 162 VGLLGMPNAGKSTFISHISNARPKVADYPFTTLHPNLGVVRVDHEQ---------------SFV-VADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHIV------DLAPFDEAVDPVAEAKAIVNELKKYD 271
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CLOK1 (GTPase obg OS=Clostridium kluyveri (strain NBRC 12016) GN=obg PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13 Identity = 49/138 (35.51%), Postives = 71/138 (51.45%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G PNVGKSTL + +TK A N+ F T+ PN VNIP + +F+ I DI G++ GA EG GLG FL HI + H++ DI ++ DP D I+ EL+ D++ +R Sbjct: 161 VGLLGFPNVGKSTLLSVVTKAAPKIANYHFTTLSPNLGVVNIP---------------GIQSFV-IADIPGIIEGAAEGVGLGIDFLRHIERTRLLIHIV------DISGLEGR-DPFGDFIKINEELKKYDVKLWDR 275
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_PELTS (GTPase obg OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=obg PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13 Identity = 53/164 (32.32%), Postives = 77/164 (46.95%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRL 562 +R ++P+ P+ ++ E ER + +G+VG PN GKSTL + ++ ++PF TI PN V + D R S V A DI GL+ GAH+G GLG+ FL H+ + HVL + DPV+D V + EL L Sbjct: 127 ARFVTPQNRAPRMAEKGEPGEERWLDLELKLLADVGLVGFPNAGKSTLISRVSAARPKIASYPFTTITPNLGVVRVDDGR-----------SFVMA-----DIPGLIEGAHKGAGLGHDFLRHVERTRLLVHVLDTAG-------SEGRDPVQDFLVTNRELSL 267
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BACLD (GTPase obg OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=obg PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13 Identity = 59/196 (30.10%), Postives = 89/196 (45.41%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER---------RIEDVEKSMKRSNDK 631 +R +P P+ S++ E ER I+ +G+VG P+VGKSTL + ++ ++ F T+ PN V D R S V A D+ GL+ GAHEG GLG+ FL HI I HV+ D+ ++ DP D I+ EL ++ ER + D E+++K +K Sbjct: 127 TRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLNPNLGMVETEDGR-----------SFVMA-----DLPGLIEGAHEGVGLGHQFLRHIERTRVIVHVI------DMSGLEGR-DPYEDYVTINKELEQYNLRLTERPQIIVANKMDMPDAEENLKAFKEK 299 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |