CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_RALSO (GTPase obg OS=Ralstonia solanacearum GN=obg PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12 Identity = 43/139 (30.94%), Postives = 68/139 (48.92%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKSTL ++ ++PF T+ PN V P + F + DI GL+ GA EG GLG+ FL H++ + HV+ D+ D+ +DPV + + I EL+ D E ++ Sbjct: 162 VGLLGMPNAGKSTLITAISNARPKIADYPFTTLHPNLGVVRTGPSKSF-----------------VVADIPGLIEGAAEGAGLGHQFLRHLQRTRVLLHVV------DLAPFDEGIDPVAEAKAIVGELKKYDAELYDK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_METFK (GTPase obg OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=obg PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12 Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD 568 +G++G+PN GKST +++ ++PF T+ PN V + R +F+ I D+ GL+ GA EG GLG+ FL H+ + H++ D+ D+SVDPVR+ I+ ELR D Sbjct: 162 VGLLGMPNAGKSTFIRSVSAAKPKVADYPFTTLHPNLGVVRVDANR---------------SFV-IADVPGLIEGAAEGAGLGHQFLRHLSRTRLLLHLV------DLAPFDESVDPVREALAITEELRKYD 271
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_GEOSF (GTPase obg OS=Geobacter sp. (strain FRC-32) GN=obg PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12 Identity = 52/163 (31.90%), Postives = 80/163 (49.08%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERR 589 P+ ++ E ER + +G++G+P+VGKS+L ++ + F T++PN V + KS V A DI GL+ GAHEG GLG+ FL H+ G + H+L DI + D DP+R+ E I+ EL L + E E++ Sbjct: 138 PRFAQPGEPGEERWLRLELKLMADVGLLGMPSVGKSSLITKVSAARPKIAEYHFTTLKPNLGVVAYKNY-----------KSFVMA-----DIPGLIEGAHEGAGLGHRFLKHLERTGHLLHIL------DISWMPDR-DPIREYEAINKELSLFNPELAEKK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BREBN (GTPase obg OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=obg PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12 Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER-RIEDVEKSMKRSNDKQLKIEHELCQRVKAW 676 P S++ E ER I+ +G+VG P+VGKSTL +++T + F T+ PN V++ + F + D+ GL+ GAHEG GLG+ FL H+ I HV+ D+ VD DP D I+ EL L +++ +R +I K ++ L+I E VK + Sbjct: 137 PHISENGEPGQERYIVMELKLIADVGLVGYPSVGKSTLLSSVTAAKPKIAAYHFTTLTPNLGVVDLGERSF-----------------VMADLPGLIEGAHEGVGLGHQFLRHVERTRLIVHVI------DMAAVDGR-DPYEDYLQINRELTLYNLKLEDRPQIVVANKMELPEAEENLRIFKEKAPDVKVY 305
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BACP2 (GTPase obg OS=Bacillus pumilus (strain SAFR-032) GN=obg PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.023e-12 Identity = 54/172 (31.40%), Postives = 78/172 (45.35%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 SR +P P+ S++ E ER ++ +G+VG P+VGKSTL + ++ ++ F T+ PN V D R S V A D+ GL+ GAHEG GLG+ FL HI I HV+ + + DP D I+ EL ++ ER Sbjct: 127 SRFATPANPAPQLSENGEPGKERDVILELKVLADVGLVGFPSVGKSTLLSIVSSAKPKIADYHFTTLVPNLGVVETDDNR-----------SFVMA-----DLPGLIEGAHEGVGLGHQFLRHIERTRVIVHVID-------MSALEGRDPYEDYVTINEELEQYNMRLTER 275
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_SYNSC (GTPase obg OS=Synechococcus sp. (strain CC9605) GN=obg PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 58/187 (31.02%), Postives = 83/187 (44.39%), Query Frame = 2 Query: 98 PPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER-RIEDVEKSMKRSNDKQLKIEHEL 655 P K ++ +E E P+ ++GI+GLPN GKSTL L+ ++PF T+ PN V +P F DI GL+ GA +G GLG+ FL HI + H++ A S DPV DL V+ EL ++R R+ + K S D K++ EL Sbjct: 138 PEKFTEGREGE-EWPLQLELKLLAEVGIIGLPNAGKSTLIAVLSAARPKIADYPFTTLVPNLGVVR-------------RPSGDGTVFA---DIPGLIEGAAQGSGLGHDFLRHIERTRLLIHLVDA----------GSEDPVADLNVVQQELEAYGHGLVDRPRLLVINKQELVSEDDLPKLQQEL 297
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_ROSCS (GTPase obg OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=obg PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 49/154 (31.82%), Postives = 69/154 (44.81%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRL 562 P+ ++ E R I +G++G PN GKSTL + ++ +PF T++PN V + + F + DI GL+ GAH G GLG SFL HI + H++ D VD DPV D I+ ELRL Sbjct: 141 PRIAELGEPGERREIELELKLLADVGLIGFPNAGKSTLLSVISAARPKIAPYPFTTLQPNLGVVEVGEYSFV-----------------VADIPGLIEGAHRGVGLGFSFLRHIERTRLLIHII------DAAGVDGR-DPVNDFSAINEELRL 270
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_RHOE4 (GTPase obg OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=obg PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 48/159 (30.19%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 107 ASKSKEAPA---------ERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556 ASK+++AP ER ++ S +G++G P+ GKS+L + L+ ++PF T+ PN V+ D F + D+ GL+ GA EG+GLG FL HI + HV+ D +D DP+ D++ + AEL Sbjct: 131 ASKARKAPGFALLGEDGVERDLVLELKSVADVGLLGFPSAGKSSLVSVLSAAKPKIADYPFTTLVPNLGVVSSGDTTF-----------------TVADVPGLIPGASEGRGLGLDFLRHIERCAVLAHVI------DCATLDPGRDPISDIDALEAEL 266
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_LEPCP (GTPase obg OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=obg PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 44/139 (31.65%), Postives = 68/139 (48.92%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKSTL ++ ++PF T+ PN V + P + F + DI GL+ GA EG GLG+ FL H++ + H++ D+ DD+VDPV + I EL+ D E+ Sbjct: 162 VGLLGMPNAGKSTLIAAISNARPKIADYPFTTLHPNLGVVRVGPSQSF-----------------VVADIPGLIEGASEGAGLGHRFLRHLQRTRVLLHMI------DMAPFDDNVDPVAQAKAIVKELKKYDPALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_GEOTN (GTPase obg OS=Geobacillus thermodenitrificans (strain NG80-2) GN=obg PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 57/175 (32.57%), Postives = 83/175 (47.43%), Query Frame = 2 Query: 62 TRRSRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 TR + A +P P+ +++ E ER ++ +G+VG P+VGKSTL + ++ + F T+ PN V D R S V A D+ GL+ GAHEG GLG+ FL HI I HV+ D+ V+ DP D VI+ EL+ ++ ER Sbjct: 127 TRFATAANPA---PEIAENGEPGEERNVILELKLLADVGLVGFPSVGKSTLLSVVSAARPKIAEYHFTTLVPNLGVVETEDGR-----------SFVMA-----DLPGLIEGAHEGVGLGHQFLRHIERTRVIVHVI------DMAAVEGR-DPYDDYVVINEELKQYNLRLTER 275 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |