CK933186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933186 vs. ExPASy Swiss-Prot
Match: RL13_CAEEL (60S ribosomal protein L13 OS=Caenorhabditis elegans GN=rpl-13 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.865e-39 Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 2 Query: 89 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMP----ITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 N ++ N HF+KHW +KTWF+QP I PRP AG LR VV +YN K R GRGF+L+ELKAAGI + A TIGI+VD RR N++ EGL++N RLK YKAKL++FP++A K GDS+ EEL A Q++G +P IT ++P +VT + + + LR ERA++++ G R Sbjct: 6 NQMLGNAHFRKHWHKRIKTWFDQPARKLRRRQNRQAKAVEIAPRPVAGLLRSVVRCPQKRYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEYKAKLILFPKKASAPKKGDSSAEELKVAAQLRGDVLPLSHTITFDEPR----QVTDAERKVEIFRLLRKERADKKYRGKR 195
BLAST of CK933186 vs. ExPASy Swiss-Prot
Match: RL13_LUMRU (60S ribosomal protein L13 OS=Lumbricus rubellus GN=RPL13 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.526e-35 Identity = 81/170 (47.65%), Postives = 105/170 (61.76%), Query Frame = 2 Query: 149 FNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 FNQP I PRP AG LRP V QT KYN +LR GRGF+L+ELKAAGI KK A IGISVD RR+N+S+E LQ NVQRLK Y++KL++FP++ K GD+ EE+ ATQ++G +P T +T + + K +D+LR RA++R G R Sbjct: 2 FNQPARKERRRVARRKKALAIAPRPAAGSLRPQVRCQTFKYNTRLREGRGFSLDELKAAGINKKEARAIGISVDVRRRNKSVESLQLNVQRLKEYRSKLILFPKKLSKPNKGDATEEEMKLATQLKGKLLPRTAWIKPEKARAITDEERKVKVFDRLRQARAHKRLAGKR 171
BLAST of CK933186 vs. ExPASy Swiss-Prot
Match: RL13A_YEAST (60S ribosomal protein L13-A OS=Saccharomyces cerevisiae GN=RPL13A PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.099e-28 Identity = 78/190 (41.05%), Postives = 101/190 (53.16%), Query Frame = 2 Query: 89 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 N I HF+KHWQ VK F+Q I PRP LRPVV T+KYN K+RAGRGFTL E+KAAG+ A TIGI+VDHRR+NR+ E +NVQRLK Y++K++VFPR + APE A QV + +P D+ A+ LR+ R+ ++ G R Sbjct: 6 NLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARATRAAKIAPRPL-DLLRPVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRNGK-------APE----AEQVLSAAATFPIAQPATDVEARAVQDNGESAFRTLRLARSEKKFRGIR 183
BLAST of CK933186 vs. ExPASy Swiss-Prot
Match: RL13_CANAL (60S ribosomal protein L13 OS=Candida albicans GN=RPL13 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.435e-28 Identity = 74/183 (40.44%), Postives = 100/183 (54.64%), Query Frame = 2 Query: 104 NGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITL---EKPTVDLVKVTQDMKSFKAYDKLRIERANER 643 N HF+KHWQ V+ F+Q I PRP LRPVV T+KYN K+RAGRGFTL ELKA GI K A TIGISVDHRR+N+S E +NV RL+ YK+KLV+F ++ + + +++ V+ P L E P + + ++ K Y +R +RA E+ Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKVRAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSATFPVEQPAPESGLRAVEVPEQTAYRTLRLARNEKKYKGIREKRAKEK 192
BLAST of CK933186 vs. ExPASy Swiss-Prot
Match: RL13B_YEAST (60S ribosomal protein L13-B OS=Saccharomyces cerevisiae GN=RPL13B PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.874e-28 Identity = 78/190 (41.05%), Postives = 101/190 (53.16%), Query Frame = 2 Query: 89 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 N I HF+KHWQ VK F+Q I PRP LRPVV T+KYN K+RAGRGFTL E+KAAG+ A TIGI+VDHRR+NR+ E +NVQRLK Y++K++VFPR + APE A QV + +P D+ A+ LR+ R+ ++ G R Sbjct: 6 NLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARAARAAKIAPRPL-DLLRPVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRDGK-------APE----AEQVLSAAATFPIAQPATDVEARAVQDNGESAFRTLRLARSEKKFRGIR 183
BLAST of CK933186 vs. ExPASy Swiss-Prot
Match: RL13_SACEX (60S ribosomal protein L13 OS=Saccharomyces exiguus GN=RPL13 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.452e-28 Identity = 75/183 (40.98%), Postives = 97/183 (53.01%), Query Frame = 2 Query: 110 HFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 HF+KHWQ VK FNQ I PRP LRPVV T+KYN K+RAGRGFT E+KAAG+ A TIGI+VDHRR+N++ E + NVQRLK Y++K++VFPR + PE QV + +P V+ AY LR+ R+ +R+ G R Sbjct: 13 HFRKHWQERVKVHFNQAGKKASRRDARVAKAAKIAPRPL-DLLRPVVRAPTVKYNRKVRAGRGFTFGEVKAAGLTPAYARTIGIAVDHRRQNKNQEMFELNVQRLKEYQSKIIVFPRNGK-------VPE----TEQVLSTAAAFPIAQPAVETETRAVQDNGESAYRTLRMARSEKRYKGIR 183 The following BLAST results are available for this feature:
BLAST of CK933186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933186 ID=CK933186; Name=CK933186; organism=Citrus sinensis; type=EST; length=792bpback to top |