CK933309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.811e-35 Identity = 66/113 (58.41%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 121 EGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 459 EG V CH+ E W +LQ++ +TK+LV VDFTA+WCGPCR I P EL+KK P + FLKVDVD L+ VA +W VEAMPTF+F+K+GK VDKVVGAKK++L++ +A A A+ Sbjct: 3 EGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKVAALAAAAT 115
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.059e-34 Identity = 67/116 (57.76%), Postives = 90/116 (77.59%), Query Frame = 1 Query: 115 AEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 462 A EG+VI CHTVE W E+L+ +NE+K+L+V+DFTA+WC PCRFIAP A+LAKK +V+F KVDVD L +VA ++ V+AMPTF+F+KEG+I + VVGA KEE+ + KH +A Sbjct: 2 AAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAA 117
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 2.014e-33 Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 100 AEMAAAEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 450 A AA G+VI H++E W Q++++N K+LVV+DFTASWCGPCR +AP A+LAKK P +FLKVDVD LK +A ++VEAMPTF+F+KEG + D+VVGA KEEL + H A Sbjct: 10 ATAAAVGAGEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKVGLHAA 126
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31 Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 1 Query: 106 MAAAEE----GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 462 MAA E G+VI CHTVE WN +L+ + E+ +L+V+DFTA WC PCRFIAP ELAKK +V+F KVDVD L +VA ++ V+AMPTF+++K + +DKVVGA KEE++ + KH A+A Sbjct: 1 MAATAELIPAGEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31 Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 1 Query: 106 MAAAEE----GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 462 MAA E G+VI CHTVE WN +L+ + E+ +L+V+DFTA WC PCRFIAP ELAKK +V+F KVDVD L +VA ++ V+AMPTF+++K + +DKVVGA KEE++ + KH A+A Sbjct: 1 MAATAEVIPAGEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31 Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 1 Query: 106 MAAAEE----GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 462 MAA E G+VI CHTVE WN +L+ + E+ +L+V+DFTA WC PCRFIAP ELAKK +V+F KVDVD L +VA ++ V+AMPTF+++K + +DKVVGA KEE++ + KH A+A Sbjct: 1 MAATAEVIPAGEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.037e-21 Identity = 43/97 (44.33%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 145 TVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 435 T E+W+++L +++ ++VV +F+A+WCGPC+ +APF EL++K +++FL VDVD L ++ W ++A PTF FLK G+ + K+VGA K ELQ+ + Sbjct: 30 TKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.017e-21 Identity = 46/109 (42.20%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 115 AEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAK 441 +E +V+ + W + E+ +L+VVDF+ASWCGPCR I P + +A K +V F+K+DVD L VA ++ V AMPTF+ +K GK +++++GAKK+EL++ ++K Sbjct: 22 SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21 Identity = 42/97 (43.30%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 145 TVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 435 T E W+++L +++ ++V+ +F+A WCGPC+ IAP+ EL++ P+++FL +DVD L + W ++A PTF FL++G+ VDK+VGA K EL + I Sbjct: 31 TKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKI 127
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 4.357e-20 Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 1 Query: 124 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 450 G VI + AW+ QL K E + +VVDFTA+WCGPC+ IAP L+ V+FLKVDVD + +VA + AMPTF K+G D +VGA +++L+ +AKH A Sbjct: 3 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKHAA 112 The following BLAST results are available for this feature:
BLAST of CK933309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933309 ID=CK933309; Name=CK933309; organism=Citrus sinensis; type=EST; length=691bpback to top |