CK933309

Overview
NameCK933309
Unique NameCK933309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: THIO_CHLMU (Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  196 LVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKH 444
            LV+VDF A WCGPC+ + P L  LA +LP V  LK+D+D     A  + V ++PT +  K+GK V++ VG K K+ L + I+KH
Sbjct:   18 LVLVDFFAEWCGPCKMLTPVLEALAAELPYVTILKLDIDASPRPAEQFGVSSIPTLILFKDGKEVERSVGLKDKDSLVKLISKH 101          
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TRX3_YEAST (Thioredoxin-3, mitochondrial OS=Saccharomyces cerevisiae GN=TRX3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1
Query:  199 VVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 435
            +V+DF A+WCGPC+ + P L +L +  P+V F+K DVD    +A +  V AMPTF+  K+G+++ K++GA    L++ I
Sbjct:   46 LVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGANPTALEKGI 124          
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13
Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  130 VIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKL--PNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIA 438
            VI   + + W   + KS      + VD  A WCGPC+ I+P  ++LA K   P  +F KV+VD  + +A+   V+AMPTF+F + GK +D + GA  + L++ +A
Sbjct:    3 VIEIRSYQHWISTIPKSG----YLAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALKEKVA 103          
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: THIO_PENCH (Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1
Query:  133 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQ 426
            +G   +++  E  +K  +    VVVDF A+WCGPC+ IAP L +L++    + F KVDVD L  VA    V AMPTF F K G+  ++V GA    +Q
Sbjct:    1 MGVTPIKSVAEYKEKVTDATGPVVVDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDELSEVAASNGVSAMPTFHFYKGGERNEEVKGANPAAIQ 98          
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: THIO_FUSCU (Thioredoxin-like protein OS=Fusarium culmorum PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  160 NEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKK--LPNVL-FLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIV------------DKVVGAKKEELQQTIAKHLATA 456
            N++LQK   +   VVVDF A WC PC+ IAP   +L+ K  +P+VL F KV+VD ++  A  + + AMPTFMF KEGK V             + +GA  E+L     K +A A
Sbjct:    8 NDELQKLLSSTTYVVVDFFADWCPPCKAIAPVYEQLSTKHSVPDVLAFAKVNVDHVQDAAQQYGITAMPTFMFFKEGKQVAVNGQAVIKGADPRTLGAAAEKLGGLAQKRVAGA 121          
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: THIO_EMENI (Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  172 QKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 450
            +K    K  VVVD  A+WCGPC+ IAP + + A+   +  F ++DVD L  VA +  + AMPTF+  K+G+ V  VVGA    L+  I   LA
Sbjct:   18 EKVLNAKGFVVVDCFATWCGPCKAIAPTVEKFAQTYTDASFYQIDVDELSEVAAELGIRAMPTFLLFKDGQKVSDVVGANPGALEAGIKALLA 110          
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: THIO_MYCGA (Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 33/91 (36.26%), Postives = 59/91 (64.84%), Query Frame = 1
Query:  166 QLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVG-AKKEELQQTI 435
            +L +   T + VVVDF A+WCGPC+ + P   E+A+   +  F+KVDVD    +++++ + ++PT +F ++GK+ DK +G   K EL++ +
Sbjct:    9 ELDQLLSTNKKVVVDFYANWCGPCKILGPIFEEVAQDKKDWTFVKVDVDQANEISSEYEIRSIPTVIFFQDGKMADKRIGFIPKNELKELL 99          
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: THIO_CYAME (Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = 1
Query:  160 NEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 447
            NE LQ    +++LV+VDF A WCGPCR I P L E+AK+  N+  ++V+ D   ++AT + + ++PT M  K+G+ VD V+GA  K  L  TI K+L
Sbjct:   11 NEVLQ----SEKLVLVDFWAPWCGPCRMIGPILEEIAKEF-NLKVVQVNTDENPNLATFYGIRSIPTLMLFKKGQRVDTVIGAVPKSILIHTINKYL 102          
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: THIO_BACSU (Thioredoxin OS=Bacillus subtilis GN=trxA PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = 1
Query:  178 SNETKQ-LVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKHL 447
            S ET + +V+ DF A WCGPC+ IAP L EL +++ + L  +K+DVD  +  A  + V ++PT + LK+G++V+  VG K KE LQ+ + KHL
Sbjct:   12 SAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL 104          
BLAST of CK933309 vs. ExPASy Swiss-Prot
Match: THIO1_SYNE7 (Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 1
Query:  172 QKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPN-VLFLKVDVDGLKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 447
            Q+  E+   V+VDF A WCGPCR +AP + E+A++  + V  +KV+ D   SVA+ + + ++PT M  K+G+ VD VVGA  K  L  T+ KHL
Sbjct:   14 QEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPSVASQYGIRSIPTLMIFKDGQRVDTVVGAVPKTTLANTLDKHL 107          
The following BLAST results are available for this feature:
BLAST of CK933309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
THIO_CHLMU2.735e-1445.24Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV... [more]
TRX3_YEAST7.958e-1441.77Thioredoxin-3, mitochondrial OS=Saccharomyces cere... [more]
TXL1_SCHPO1.039e-1337.14Thioredoxin-like protein 1 OS=Schizosaccharomyces ... [more]
THIO_PENCH1.357e-1341.84Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=... [more]
THIO_FUSCU1.773e-1341.23Thioredoxin-like protein OS=Fusarium culmorum PE=1... [more]
THIO_EMENI1.773e-1341.94Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV... [more]
THIO_MYCGA2.315e-1336.26Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE... [more]
THIO_CYAME2.315e-1344.33Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=... [more]
THIO_BACSU2.315e-1344.09Thioredoxin OS=Bacillus subtilis GN=trxA PE=1 SV=3[more]
THIO1_SYNE73.024e-1343.62Thioredoxin-1 OS=Synechococcus elongatus (strain P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_A09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933309 ID=CK933309; Name=CK933309; organism=Citrus sinensis; type=EST; length=691bp
GGGGAAAGAAACCCCATACGCAAATCACCAAGAGCAAGAAAGCGAGGGAG
AGAATAGAAGTATCGTTGGGTGGAGTAGTGGTGGTAATAACCGCGGAAAG
CAGAAATGGCAGCAGCAGAAGAGGGACAAGTCATCGGGTGCCACACCGTT
GAGGCCTGGAACGAGCAGCTCCAGAAGAGCAATGAAACCAAACAGCTGGT
TGTTGTTGATTTCACTGCTTCATGGTGCGGACCATGCCGTTTCATTGCTC
CTTTCTTGGCAGAGCTGGCCAAGAAACTGCCTAATGTCCTGTTTCTGAAG
GTTGATGTGGATGGACTGAAGAGTGTTGCCACTGACTGGGCAGTGGAGGC
CATGCCAACTTTCATGTTCCTGAAAGAGGGGAAGATTGTGGACAAGGTGG
TTGGAGCAAAGAAAGAGGAACTGCAGCAGACTATTGCCAAGCATCTGGCA
ACTGCTTCTGCCTAATAAGTTATAACTATCCTCCTGCCTTTTGGCTTTAG
AGGCTATAGACCTCAATATATGCTATCAGTCTGTAATTTACTTATTAGAG
TGGTTATGGGATTGTGTTTGTTTGTGTGTTTGAATATTCCGTAATTTACT
GTTCTATGAAGCTCATACTGTGGTCTTTACAATAATTTAATTTCATATTT
GTTGTTGAACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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