CK933373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_THEAC (Dihydroorotate dehydrogenase OS=Thermoplasma acidophilum GN=pyrD PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13 Identity = 55/198 (27.78%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 261 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWE----NIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVA 842 DLS +V G+++ NP ++ SG N M + G AVV K++ ++ NG + I+ + N +S+ ++ +E + K + +I S+ + ++ L +++E G DA+E+N SCPH + G VG D L+E++ + +K +VPV+AK++PN++DI E A+ A Sbjct: 3 DLSTSVAGIRLENPLMLASGILDENGYTMLDVMNNGAAAVVTKSIGMEER----------------NGYSAPVIVEYGDSLINAVGLSNPGIDNFAEEIRIAKR--SGKPVIGSVFAS-DAESFVNLGRKMQEYGCDAVELNLSCPH---VKGFGLEVGSDPDLVEDIVNEMKSKISVPVFAKLSPNVSDIIEIAKAA 178
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_PYRFU (Dihydroorotate dehydrogenase OS=Pyrococcus furiosus GN=pyrD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.033e-13 Identity = 58/210 (27.62%), Postives = 98/210 (46.67%), Query Frame = 3 Query: 264 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTIMSV 893 + I + G+ NP ++ SG +++RA EG G VV K++ ++ K + P + G + GW+ L+EF++ +P +I SI N + L +++E G DA E+N SCPH + G +GQD + V + PV AK+TPN +DIT+ A ++ ++G S NT+ ++ Sbjct: 3 IKIELFGITFENPLILASGVVDMTPELLRRAHKEGAGGVVTKSIGIEPRKGYD-NPTVVEVPCGLINAMGLPNPGWK-----------AFLEEFEKESFDFP---VIVSIFGG-NPEEFAFLAEKLERVG-DAFELNLSCPHA---KGYGLEIGQDPENVYRVVKAVKDVTDKPVIAKLTPNTSDITKLGLAAEKAEADGVSAINTLKAI 192
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_GEOSF (Dihydroorotate dehydrogenase OS=Geobacter sp. (strain FRC-32) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.033e-13 Identity = 59/211 (27.96%), Postives = 99/211 (46.92%), Query Frame = 3 Query: 252 AEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTI 884 A+PDLS+ ++G+++ NP + SG G E GA++ K +SL K N TPR G + Q +G + I ++ + + LY + +EEY + A E +DR+ E + +EVN SCP+ ++ G G D EV G + + P+ K++PN+TD+ A + +G++ S NT+ Sbjct: 2 AKPDLSVEISGIKLRNPVMTASGTFGYGKEFSDYLDLEKIGAIITKGLSL-RPKAGNPTPRIVETPGGMLNAIGLQNVGID--AFIGEKLPFLRTVDTPVIVNLY------GNTLEEYGELA--EKLDRLPE--VAGLEVNISCPN---VKQGGIVFGTDPNAAAEVVGLVRRSTSKPLIIKLSPNVTDVVRMADACVNAGADALSLINTL 196
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_LACH4 (Dihydroorotate dehydrogenase OS=Lactobacillus helveticus (strain DPC 4571) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12 Identity = 57/210 (27.14%), Postives = 105/210 (50.00%), Query Frame = 3 Query: 270 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTIMSV 893 + + GL + NP + SG G + FD GA+V KT + A N P+ A L G S + L + + + ++ +L+ YPD ++AS+ + ++ + E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++ K+TPN+TDI E A+ A G++G S NT++ + Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTTPHATTG-NPQPQIAILEDGVLNS----------VGLTNPGVDQVISEKLTKLRHQYPDLPIMASVGGD-SEDDYVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALPIYVKLTPNVTDIVEIAKAAESGGADGISMINTLLGM 200
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_ANATD (Dihydroorotate dehydrogenase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12 Identity = 61/213 (28.64%), Postives = 106/213 (49.77%), Query Frame = 3 Query: 261 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTIMSV 893 +L + + G+++ NP + SG G K +GA+ K ++L ++ N PR + AG S +G EN +E + L LK F D +IA+I ++K + EL ++ + +D IEVN SCP+ ++ G G+D + + E+ + A+ P+ K+TPN+TDIT+ A A +G++ S NT+ ++ Sbjct: 2 NLEVEIAGIKLKNPVIAASGTFGFGREYSKLIDISEFGAICTKGITLKK-RIGNPQPRLCEVYAGIINS-----VGLENPGVEAFINDELP-FLKSF--------DTKIIANI-NGFSKEEFVELT-KILTSLVDMIEVNLSCPN---VKEGGMVFGKDPKKVYEITKSVKDVASCPIIVKLTPNVTDITQLAVAAENAGADAISLINTVSAM 194
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_GEOBB (Dihydroorotate dehydrogenase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=pyrD PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12 Identity = 62/210 (29.52%), Postives = 100/210 (47.62%), Query Frame = 3 Query: 258 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTI 884 PD+S+ V G++M NP + SG G E GA+++K +SL K N TPR G + IG +N+ + D +E L K + P + L + +EEY + A +D + +G+ IEVN SCP+ ++ G G D +EV + T P+ K++PN+TD+ A+ +G++ S NT+ Sbjct: 4 PDMSVAVAGIKMRNPVMTASGTFGYGAEFADYLDLECIGAMISKGLSLKP-KAGNPTPRIVETPGGMLNA-----IGLQNVGI--DAFIEQKLPYLKNVNT--PVIVNLYGNTLEEYGEVAAR--LDGL--SGVAGIEVNISCPN---VKQGGIVFGTDPGAAQEVVRLVKKNTTKPMIVKLSPNVTDVVLMAKACADAGADALSLINTL 196
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_GEOSM (Dihydroorotate dehydrogenase OS=Geobacter sp. (strain M21) GN=pyrD PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12 Identity = 61/210 (29.05%), Postives = 99/210 (47.14%), Query Frame = 3 Query: 258 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTI 884 PD+S+ V G++M NP + SG G E GA+++K +SL K N TPR G + IG +N+ + D +E L K + P + L + +EEY + A +D + G+ IEVN SCP+ ++ G G D +EV + + P+ K++PN+TD+ A+ +G++ S NT+ Sbjct: 4 PDMSVAVAGIKMRNPVMTASGTFGYGAEFADYLDLESIGAMISKGLSLKP-KAGNPTPRIVETPGGMLNA-----IGLQNVGI--DAFIEQKLPYLKNVNT--PVIVNLYGNTLEEYGEVAAR--LDGL--AGVAGIEVNISCPN---VKQGGIVFGTDPGAAQEVVRLVKKNTSKPMIVKLSPNVTDVVVMAKACADAGADALSLINTL 196
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_ALKOO (Dihydroorotate dehydrogenase OS=Alkaliphilus oremlandii (strain OhILAs) GN=pyrD PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12 Identity = 57/211 (27.01%), Postives = 101/211 (47.87%), Query Frame = 3 Query: 261 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTIMSV 893 ++ + + G+Q+ NP + SG G+ + GAVV K V+ + N TPR A G S +G +N +E +K+ Q Y +I++ + A + ++ +++ + ID IE+N SCP+ + G G + ++EEV + A P+ K+TPN+TDI E A+ A+ G++ S NT++ + Sbjct: 5 NMGVHIAGIQLKNPVMTASGTFGSGREYSEFVDLNQLGAVVVKGVANEPWSG-NPTPRIAETYGGMLNS-----VGLQN------PGVEAFIKDDIQFLRQYDTKIIVN--IAGRTVADYCKVTEKLGDADIDLIELNISCPN---VKAGGVNFGTNPAMVEEVTKAVKKVARQPLIVKLTPNVTDIVEIAKAAVAGGADAISLINTLLGM 198
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_CLOPH (Dihydroorotate dehydrogenase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=pyrD PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.107e-12 Identity = 59/208 (28.37%), Postives = 99/208 (47.60%), Query Frame = 3 Query: 267 SITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTI 884 ++T+ G+ NP SG G+ + GA+ K VS N PR A G + IG +N +++ +R L LK+F D +I ++ + K + E+++R+ E +D +E+N SCP+ ++ A GQD +++ + I A PV K++PN+TDITE A+ A G++ S NT+ Sbjct: 4 NVTIAGVTFKNPVTTASGTFGSGMEYSEFVDLNRLGAITTKGVS-SVPWPGNPVPRIAETYGGMLNA-----IGLQNPGVDMFVERDL-AFLKQF--------DTKVIVNVCGKSVKE-YVEVVERLSEEAVDLLELNISCPN---VKEGCIAFGQDPKMIAMIMDEIKRHAKQPVIVKLSPNVTDITEMAKAAEAGGADALSLINTL 192
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_METMA (Dihydroorotate dehydrogenase OS=Methanosarcina mazei GN=pyrD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.670e-12 Identity = 62/208 (29.81%), Postives = 93/208 (44.71%), Query Frame = 3 Query: 264 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTI 884 L T+ GL++ NP ++ +G GT + R EG GAVV K++ A K + P L G + N + + L+E + K D +IASI + + E+ + + DA E+N SCPH GAA+G + L+E V + VPVW K+TPN+ DIT A G++ NT+ Sbjct: 13 LMYTLTGLKLKNPTILAAGVLGTTGASLCRVAREGGAGAVVTKSIG-PAPKTGHPNPSMIELDCG-----------FLNAMGLPNPSYPGFLQELEFAKE-NSDAPVIASIFGG-TPSEFAEVAEGLLPAKPDAFELNVSCPHA---EGYGAAIGSNPCLVEAVTAAVKDVVNVPVWVKLTPNVADITCIGNAAESGGADAVVAINTV 203 The following BLAST results are available for this feature:
BLAST of CK933373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933373 ID=CK933373; Name=CK933373; organism=Citrus sinensis; type=EST; length=893bpback to top |