CK933373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_LACAC (Dihydroorotate dehydrogenase OS=Lactobacillus acidophilus GN=pyrD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11 Identity = 57/210 (27.14%), Postives = 106/210 (50.48%), Query Frame = 3 Query: 270 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTIMSV 893 IT+ GL + NP + SG G + FD GA+V KT + A N P+ A L G S + L + + + ++ L+ YP+ ++AS+ + +++ + E+ ++ ++ ++A+E+N SCP+ + G + G ++EE+ I VP++ K+TPN+TDI A+ A + G++G S NT++ + Sbjct: 6 ITLPGLDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTTPKATSG-NPQPQIAVLDDGVLNS----------VGLTNPGVDQVISEKLVPLRKQYPNLPIMASVGGD-SESDYVEVAKKLSDSDLVNALEINVSCPN---VAQGGMSFGVHPDVVEELTKKIKDVVDVPIYVKLTPNVTDIVAIAQAAEKGGADGISMINTVLGM 200
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_LACDB (Dihydroorotate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=pyrD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11 Identity = 56/210 (26.67%), Postives = 104/210 (49.52%), Query Frame = 3 Query: 270 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTIMSV 893 + + GL + NP + SG G + FD GA+V KT + A N P+ A L G S + L + + + ++ +L+ Y D ++AS+ + ++ + E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++ K+TPN+TDI E A+ A G++G S NT++ + Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTTPHATTG-NPQPQIAILEDGVLNS----------VGLTNPGVDQVISEKLTKLRHQYIDLPIMASVGGD-SEDDYVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALPIYVKLTPNVTDIVEIAKAAESGGADGISMINTVLGM 200
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_LACDA (Dihydroorotate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=pyrD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11 Identity = 56/210 (26.67%), Postives = 104/210 (49.52%), Query Frame = 3 Query: 270 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTIMSV 893 + + GL + NP + SG G + FD GA+V KT + A N P+ A L G S + L + + + ++ +L+ Y D ++AS+ + ++ + E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++ K+TPN+TDI E A+ A G++G S NT++ + Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTTPHATTG-NPQPQIAILEDGVLNS----------VGLTNPGVDQVISEKLTKLRHQYLDLPIMASVGGD-SEDDYVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALPIYVKLTPNVTDIVEIAKAAESGGADGISMINTVLGM 200
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_ALKMQ (Dihydroorotate dehydrogenase OS=Alkaliphilus metalliredigens (strain QYMF) GN=pyrD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11 Identity = 57/214 (26.64%), Postives = 104/214 (48.60%), Query Frame = 3 Query: 261 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILI---ASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTIMSV 893 ++ + + G+++ NP + SG G+ + GAVV K V+ + K N +PR A G S +G +N + D +E + +Q Y +I++ +E+Y E++ ++ + +D +E+N SCP+ + G G D ++EEV + A P+ K+TPN+TDI A+ A+ G++G S NT++ + Sbjct: 5 NMKVNIAGVELKNPVMTASGTFGSGREYGEYVDLNQLGAVVVKGVANEPWKG-NPSPRIAETYGGMLNS-----VGLQNPGV--DEFIEKDIPFLRQ----YNTKIIVNIAGRTIEDYC-----EVVKKLGDADVDLLELNISCPN---VKAGGVCFGTDPFMVEEVTKAVKKVAKQPLIVKLTPNVTDIVPIAKAAVAGGADGISLINTLLGM 198
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_GEOUR (Dihydroorotate dehydrogenase OS=Geobacter uraniireducens (strain Rf4) GN=pyrD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.535e-11 Identity = 58/211 (27.49%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 255 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTI 884 +PDLS+ V G+++ NP + SG G E GA++ K +S+ K N TPR G + IG +N+ + D ++ L + + P + L + +EEY + A E +D++ E + +EVN SCP+ ++ G G D EV + P+ K++PN+T++ E A + +G++ S NT+ Sbjct: 3 KPDLSVEVAGIKLRNPVMTASGTFGYGKEFADYLDLEKIGAIITKGLSI-RPKAGNPTPRIVETPGGMLNA-----IGLQNVGI--DAFIQEKLPFLRTVNT--PVIVNLYGNTLEEYGELA--EKLDKLPE--VAGLEVNISCPN---VKQGGIVFGTDPNAAYEVVSLVRESTIKPLIVKLSPNVTNVVEMANACVDAGADALSLINTL 196
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_DESAD (Dihydroorotate dehydrogenase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=pyrD PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.324e-11 Identity = 64/209 (30.62%), Postives = 96/209 (45.93%), Query Frame = 3 Query: 261 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGASXXNTI 884 D+SI GL++ NP + SG G + E G +V K +SL + N PR A G + Q G E E I+ + + K L LY A+ EE+ + A E G+ A+EVN SCP+ ++ G A GQD + + +V + A P+ K++PN+TDIT A+ A G++ S NT+ Sbjct: 2 DVSIDFAGLKLKNPILTASGTFGFGLEFQRYGDLESLGGIVVKGLSLKPREG-NPMPRIAETPCGMLNAIGIQNPGVE--EFINKKLPKLPWKTLPVLANLY------ATDAEEFGELAGV----LAGEEGVAALEVNVSCPN---VKEGGIAFGQDPKQITKVAEAVKKNAGNKPIIIKLSPNVTDITVCAKAAEDGGADALSLINTL 194
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_NATTJ (Dihydroorotate dehydrogenase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=pyrD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11 Identity = 60/209 (28.71%), Postives = 91/209 (43.54%), Query Frame = 3 Query: 261 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTI 884 DL + G+ M NP SG G + GA+V K ++L + T RL A+G IG EN + D + +L + +Q A I N + E+ ++ GI +EVN SCP+ R+ G G D L + + + PV K++PN+TDITE A+ R+G++G S NT+ Sbjct: 3 DLKVNFAGIPMKNPVASASGTFGFGFEYQSVISPHELGALVVKGLTLSPKRGNQGT----RLHETASGLLNS--IGLENPGI--DNFINEILPDLRQCDATTLINI------SGGNDEEYVEITQKLNNCQGIAGLEVNISCPN---IREGGLVYGVDPELTYRLVSKVRQSTSFPVIVKLSPNVTDITEIAKACERAGADGLSLINTV 194
BLAST of CK933373 vs. ExPASy Swiss-Prot
Match: PYRD_LISW6 (Dihydroorotate dehydrogenase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=pyrD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11 Identity = 58/211 (27.49%), Postives = 104/211 (49.29%), Query Frame = 3 Query: 264 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGASXXNTIMSV 893 L++ + GL + NP + SG G K GA++AK V+ + ++ N TPR A +G + Q G E++ L + P L++F+ P +A E+ + E+ R+ E+ + AIE+N SCP+ + G A G D + + + + A+VPV+ K++PN+ DI A+ +G++G + NT++ + Sbjct: 4 LAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNKLGAIMAKAVTPEP-RLGNPTPRVAETASGMLNAIGLQNPGLEHV-LAHELPF---LEQFET-----PIIANVAGATED----DYVEVCSRIGESKAVKAIELNISCPN---VKHGGIAFGTDPEVAHRLTKAVKSVASVPVYVKLSPNVADIVSIAQAIEAAGADGLTMINTLLGM 197 The following BLAST results are available for this feature:
BLAST of CK933373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933373 ID=CK933373; Name=CK933373; organism=Citrus sinensis; type=EST; length=893bpback to top |