CK933467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB7B_ARATH (Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13 Identity = 58/184 (31.52%), Postives = 87/184 (47.28%), Query Frame = 1 Query: 214 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASG 765 QK KA GTT + IFK+GV++ AD+RA+ G ++ ++ +KI + P + AG AAD + + + RLH R V A LL L+SY+G +S ++ G D TGP L+ + G ++GSGS A V ++ YK ++ I F D SG Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQG-HVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSG 209
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB7A_ARATH (Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13 Identity = 60/200 (30.00%), Postives = 91/200 (45.50%), Query Frame = 1 Query: 214 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKL 813 QK KA GTT + IFK+GV++ AD+RA+ G ++ ++ +KI + P + AG AAD + + + RLH R V A LL L+SY+G +S ++ G D TGP L+ + G ++GSGS A V ++ YK ++ I F D SG + + E L Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQG-HVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYL 225
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB7_SCHPO (Probable proteasome subunit beta type-7 OS=Schizosaccharomyces pombe GN=SPAC23D3.07 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13 Identity = 58/199 (29.15%), Postives = 95/199 (47.74%), Query Frame = 1 Query: 199 DFDEFQKDT----------KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASG 765 DF+ +Q++ KAT + GTT + I K+ +++ AD+RA+ G I+ ++ KK+ I+P + AG AAD +F + LH L R+ V A +L L+ Y+G + ++ G+D GP L+ + + G K ++GSGS A VL++ Y+ D+ I F D SG Sbjct: 11 DFEYYQRNLLLQEKGFPTPKAT---STGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQG-HIGAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSG 205
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13 Identity = 52/178 (29.21%), Postives = 85/178 (47.75%), Query Frame = 1 Query: 241 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGG 768 HA+ GTT +F++GV++ AD+RA+ ++ +S +KI I P + AG AAD + R K LH L+ R V +++L L+ Y+G + ++ G D GP LY V G + ++GSG A +L+ ++ +M++ I D SGG Sbjct: 34 HARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQG-HVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGG 210
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13 Identity = 52/178 (29.21%), Postives = 84/178 (47.19%), Query Frame = 1 Query: 241 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGG 768 HA+ GTT +F++GV++ AD+RA+ ++ + +KI I P + AG AAD + R LH L+ R V +++L L+ Y+G + ++ G D TGP LY V G + ++GSG A VL+ ++ +M++ I D SGG Sbjct: 34 HARKTGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGY-VGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAITAGILGDLGSGG 210
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB6_YEAST (Proteasome component PRE3 OS=Saccharomyces cerevisiae GN=PRE3 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12 Identity = 52/189 (27.51%), Postives = 90/189 (47.62%), Query Frame = 1 Query: 250 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWEKL 813 GT+ +A FK+GV++ ADSR + G YI+++ K+ ++ + +G AAD Q + L+ + T AS + + Y + L+ G ++AG+D+ G Y GG + +++ GSGS + YG D ++ +MS + A D +SGGV + + G E+L Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAAS-VFKELCYENKD-NLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERL 205
BLAST of CK933467 vs. ExPASy Swiss-Prot
Match: PSB_STRCO (Proteasome subunit beta OS=Streptomyces coelicolor GN=prcB PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12 Identity = 58/205 (28.29%), Postives = 101/205 (49.27%), Query Frame = 1 Query: 250 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM---GLSVGTMIAGWD-ETGPG-LYYVDSEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGG--VASVYY-----VGPNGWEKLSGDD 825 GTT +A F GV++A D RA+MG I+ + ++K+ + Y +AG A + ++ E ++S+ G + L+ ++ S GM GL+V + AG+D + G G ++ D GGR + F + GSGS +A G + ++ D++ +Y A D+A+GG VA Y + +G+ +L D+ Sbjct: 53 GTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKLFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRGRGRIFSYDVTGGRSEERHFATTGSGSVFARGAMKKLFRDDLTEEQATTLVVQALYDAADDDSATGGPDVARRIYPIITVITEDGFRRLGEDE 257 The following BLAST results are available for this feature:
BLAST of CK933467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933467 ID=CK933467; Name=CK933467; organism=Citrus sinensis; type=EST; length=829bpback to top |