CK933540
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933540 vs. ExPASy Swiss-Prot
Match: RL5_MAGSA (50S ribosomal protein L5 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplE PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.658e-11 Identity = 47/159 (29.56%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 46 RLRLH*AAAVTHHQQTRMASEKKLSNPMREIKVQKLVLNISVGESGD---RLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVV 492 RLR H V + + E +NPM+ K+QK+V+N+ VGE+ ++ A L +SGQ PV +KA+ ++ F +R + + C VT+R ++ + L+ + +V+++ + ++F G + G++E I I YD I GMD V Sbjct: 3 RLRKHYDTVV----KPALQKEFNYANPMQVPKLQKIVINMGVGEAAQDSKKIESALAELTLISGQKPVSTKAKMSIAQFKLREGQVVGCKVTLRAERMYEFLDRLINIALPRVRDFRGVPGKSFDGRGNYSLGLKEQIVFPEIDYDKVETIRGMDIIFV 157
BLAST of CK933540 vs. ExPASy Swiss-Prot
Match: RL5_AQUAE (50S ribosomal protein L5 OS=Aquifex aeolicus GN=rplE PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.658e-11 Identity = 45/133 (33.83%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 121 NPMREIKVQKLVLNISVGESGD---RLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFV 489 +PM+ ++QK+V+N+ VGE+ +L RA + L ++GQ PV ++AR + F +R+ I C VT+R ++ L+ + +VK+++ L R+F G + FGI E I I YD I GMD + Sbjct: 32 SPMQIPRLQKIVVNMGVGEAVQDIRQLERAVEDLRAITGQQPVITRARKSEAGFKLRKGMPIGCKVTLRKERMWDFLDKLISVALPRVKDFKGLSPRSFDGRGNYAFGIAEQIVFPEIDYDKVDRIRGMDIII 164 The following BLAST results are available for this feature:
BLAST of CK933540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933540 ID=CK933540; Name=CK933540; organism=Citrus sinensis; type=EST; length=833bpback to top |