CK933876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: ACSM4_MOUSE (Acyl-coenzyme A synthetase ACSM4, mitochondrial OS=Mus musculus GN=Acsm4 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.184e-11 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 32 VDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSEN-----EVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 331 V R ++I GY++ P E+E+ L+ HP + ++AVV PD G+ A++V A + S E+ D V APYK R+V FV +PK +GKI R L Sbjct: 468 VGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFIVLAAPYKCSNREKLTAELQDHVKNSTAPYKYPRKVEFVQELPKTITGKIKRNVL 572
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: ACSM4_RAT (Acyl-coenzyme A synthetase ACSM4, mitochondrial OS=Rattus norvegicus GN=Acsm4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.853e-11 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 32 VDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSEN-----EVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 331 V R ++I GY++ P E+E+ L+ HP + ++AVV PD G+ A++V A + S E+ D V APYK R+V FV +PK +GKI R L Sbjct: 468 VGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFIVLAAPFKSSNREKLTAELQDHVKNSTAPYKYPRKVEFVQELPKTITGKIKRNVL 572
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: ACSM1_MOUSE (Acyl-coenzyme A synthetase ACSM1, mitochondrial OS=Mus musculus GN=Acsm1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.853e-11 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 47 ELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVV--REAGSRLSE---NEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 331 ++I GY++ P E+E L HP ++++AVV PDK+ G+ A++V E S E E+ V APYK R+V FV+ +PK +GKI RK+L Sbjct: 466 DVINASGYRIGPVEVENALAEHPAVAESAVVSSPDKDRGEVVKAFIVLNPEFLSHDQEQLIKELQHHVKSVTAPYKYPRKVEFVSELPKTVTGKIKRKEL 565
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: ACSF3_HUMAN (Acyl-CoA synthetase family member 3, mitochondrial OS=Homo sapiens GN=ACSF3 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.853e-11 Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = 2 Query: 47 ELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIK 337 ++IK GY+V E+E LL HP I+D AV+ PD GQ A V G LS E+ ++ +APY + V IP+N GKI +K LI+ Sbjct: 475 DIIKTGGYKVSALEVEWHLLAHPSITDVAVIGVPDMTWGQRVTAVVTLREGHSLSHRELKEWARNVLAPYAVPSELVLVEEIPRNQMGKIDKKALIR 571
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: ACSA_PARL1 (Acetyl-coenzyme A synthetase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=acsA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.853e-11 Identity = 36/105 (34.29%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 38 RLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSE---NEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLA 343 R+ +++ G+++ AE+E+ L+ HPK+++AAVV +P GQ AYV AG +E E++ +V +++ P + F +PK SGKI+R+ L K+A Sbjct: 512 RVDDVLNVSGHRMGTAEVESALVAHPKVAEAAVVGYPHDIKGQGIYAYVTLIAGEAATEELRKELVTWVRKEIGPIASPDLIQFAPGLPKTRSGKIMRRILRKIA 616
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.726e-11 Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 32 VDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 355 VDR K++I G+ V P E+E +++ HP + + A V P +G+ +VV++ S L+E ++ F RQ+ YK + V F +PK+ GKILR++L A K+ Sbjct: 451 VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPS-LTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKV 557
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: LCFA_ECOL6 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6 GN=fadD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.726e-11 Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 32 VDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 355 VDR K++I G+ V P E+E +++ HP + + A V P +G+ +VV++ S L+E ++ F RQ+ YK + V F +PK+ GKILR++L A K+ Sbjct: 451 VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPS-LTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKV 557
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.726e-11 Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 32 VDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 355 VDR K++I G+ V P E+E +++ HP + + A V P +G+ +VV++ S L+E ++ F RQ+ YK + V F +PK+ GKILR++L A K+ Sbjct: 451 VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPS-LTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKV 557
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: ACSA_METPB (Acetyl-coenzyme A synthetase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=acsA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.726e-11 Identity = 38/105 (36.19%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 38 RLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVV---REAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLA 343 R+ ++I G+++ AE+E+ L+ HPK+S+AAVV +P GQ AYV E GS E++ +V + + P + F +PK SGKI+R+ L K+A Sbjct: 514 RVDDVINVSGHRMGTAEVESSLVAHPKVSEAAVVGYPHNVKGQGIYAYVTLNEGEDGSDELRKELVTWVRKDIGPIASPDLIQFAPGLPKTRSGKIMRRILRKIA 618
BLAST of CK933876 vs. ExPASy Swiss-Prot
Match: YDAB_BACSU (Putative acyl--CoA ligase ydaB OS=Bacillus subtilis GN=ydaB PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.866e-11 Identity = 36/100 (36.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 38 RLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIK 337 R K++I Y G V P ++E ++ P I + AVV PD G+ P A++V+ G R++E +V+ F +++ YK + V FV +PKN GK+ +KD+++ Sbjct: 400 RYKDVIIYGGDNVYPDQVEEVIQQIPGILETAVVGIPDPLYGEKPKAFIVKNGGQRITEEDVIAFCKERLSAYK-IPEVEFVNELPKNNLGKV-KKDVLR 497 The following BLAST results are available for this feature:
BLAST of CK933876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933876 ID=CK933876; Name=CK933876; organism=Citrus sinensis; type=EST; length=534bpback to top |