CK933924

Overview
NameCK933924
Unique NameCK933924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 3.509e-75
Identity = 142/235 (60.43%), Postives = 165/235 (70.21%), Query Frame = 1
Query:  115 QNCG---SGVVCPGGECCSRFGWCGLTTDYCC-EGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVII 789
            + CG    G +CPGG CCS+FGWCG T DYC   GCQS C+           G A   G L  +ISR+ F  +L +RND  CPAR FYTYDAFI AA++FPAF  +G++  RKREIAAF AQT HETTGG  W  AP G YAWGYC+NRE+   SS YC  DPNYPC  GK Y+GRGP+QL+WN NY +CG A+GVD LNNPDLL++DP +SFKSA WFWMT Q PKPS H VII
Sbjct:    1 EQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVII 224          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 4.582e-75
Identity = 140/241 (58.09%), Postives = 163/241 (67.63%), Query Frame = 1
Query:  106 GSAQNCG---SGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGE-----CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC-RGKYY-GRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            GSA+ CG      +CPGG CCS +GWCG T DYC  GCQS C+    G+     CD  D   GDG  G L  II +  F+ LL++RND RCPA  FYTY+AFI AAK FP FGN+G++ MRKREIAAF  QT HETTGGWPDAP G YAWGYC+ +E+      YCDP  NY C  GK Y GRGPIQL+WN NY  CG+ L +  L  P+L+ TDPV+SFK+AIWFWM  Q PKPS H VI
Sbjct:   20 GSAEQCGRQAGDALCPGGLCCSSYGWCGTTVDYCGIGCQSQCDGGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVI 258          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.021e-74
Identity = 135/234 (57.69%), Postives = 162/234 (69.23%), Query Frame = 1
Query:  112 AQNCG---SGVVCPGGECCSRFGWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVII 789
            A+ CG    G +CP G CCS FGWCG T  YC + GCQS C     G   P     G  G+L  IISR  F+D+L++RND  CPAR FYTYDAFI AAK+FP FG +G+   RK+EIAAFF QT HETTGGW  AP G Y+WGYCF +E    SS+YC P+  +PC     YYGRGP+QL+WN NY +CG A+G D LNNPDL++ DPV++FK+AIWFWMT Q PKPS H VI+
Sbjct:   20 AEQCGRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQC-----GGTPP-----GPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQN-PSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIV 242          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.274e-74
Identity = 138/236 (58.47%), Postives = 164/236 (69.49%), Query Frame = 1
Query:  109 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVII 789
            SA+ CG    G  C  G CCS FGWCG T DYC  G CQS C      +  P  G    GG++G +IS  MF+ +L++RND  C  +  FY+Y+AFI AA++F  FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G+   DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVD LNNPDL+ATDPV+SFKSAIWFWMT Q PKPS H+VII
Sbjct:   17 SAEQCGKQAGGARCAAGLCCSNFGWCGNTNDYCGPGKCQSQCPSGPSPK-PPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVII 250          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.925e-73
Identity = 138/235 (58.72%), Postives = 162/235 (68.94%), Query Frame = 1
Query:  109 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            SA+ CGS   G +C  G CCS+FGWCG T DYC  G CQS C            G  G  G+LG +IS  MF+ +L +RND  C  +  FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G +  DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVD LNNPDL+ATD V+SFKSAIWFWMT Q PKPS H+VI
Sbjct:   17 SAEQCGSQAGGALCASGLCCSKFGWCGDTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVI 239          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.289e-73
Identity = 136/235 (57.87%), Postives = 162/235 (68.94%), Query Frame = 1
Query:  109 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            SA+ CGS   G +C  G CCS+FGWCG T +YC  G CQS C            G  G  G+LG +IS  MF+ +L +RND  C  +  FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G+   DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVD LNNPDL+ATDPV+SFKSAIWFWMT Q PKPS H+VI
Sbjct:   21 SAEQCGSQAGGALCASGLCCSKFGWCGNTNEYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVI 243          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 9.555e-73
Identity = 132/237 (55.70%), Postives = 165/237 (69.62%), Query Frame = 1
Query:  112 AQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELG-----KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            A+ CGS   G +CP   CCS +GWCG T+DYC +GCQS C+   CG      G  G GG  G      ++S+++FE LL +RND  CPAR FYTYDA + AA AFP F  +G++  RKRE+AAF  QT HETTGGW  AP G Y+WGYCF  E+GA +S YC P+  +PC    KY+GRGPIQL++N NY   GEA+G D LNNP+L+A+DPV+SFK+A+WFWMT Q PKPS H+VI
Sbjct:   23 AEQCGSQAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDG--CGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVI 256          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 9.555e-73
Identity = 137/235 (58.30%), Postives = 161/235 (68.51%), Query Frame = 1
Query:  109 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            SA+ CGS   G +C  G CCS+FGWCG T DYC  G CQS C            G  G  G+LG +IS  MF+ +L +RND  C  +  FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G +  DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVD LNNPDL+ATD V+SFKSAIWFWMT Q PKPS H+VI
Sbjct:   17 SAEQCGSQAGGALCAPGLCCSKFGWCGNTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVI 239          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.631e-72
Identity = 137/236 (58.05%), Postives = 164/236 (69.49%), Query Frame = 1
Query:  112 AQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCG----ECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            A+ CGS   G  CP   CCSRFGWCG T+DYC +GCQS C    CG       P    +G GG +  I+SR +F+ +L +RND  C A+ FYTYDAF+ AA AFP FG +G+   RKRE+AAF AQT HETTGGW  AP G +AWGYCF +E G A+S+YC P+  +PC  GK YYGRGPIQL+ N NY   G A+GVD L NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI
Sbjct:   19 AEQCGSQAGGATCPNCLCCSRFGWCGSTSDYCGDGCQSQC--AGCGGGGTPVTPTPTPSGGGG-VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVI 250          
BLAST of CK933924 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 6.193e-72
Identity = 135/235 (57.45%), Postives = 160/235 (68.09%), Query Frame = 1
Query:  109 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDWLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSWHEVI 786
            SA+ CGS   G +C  G CCS+FGWCG T DYC  G CQS C               G  G+LG +IS  MF+ +L +RND  C  +  FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGW  AP G YAWGYCF RE G +  DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVD LNNPDL+ATD ++SFKSAIWFWMT Q PKPS H+VI
Sbjct:   17 SAEQCGSQAGGALCASGLCCSKFGWCGNTNDYCGPGNCQSQC-------------PGGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQG-SPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVI 237          
The following BLAST results are available for this feature:
BLAST of CK933924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI2_GOSHI3.509e-7560.43Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI6_POPTR4.582e-7558.09Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHI2_BRANA1.021e-7457.69Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHI4_SOLTU2.274e-7458.47Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_SOLTU1.925e-7358.72Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHIC_SOLLC4.289e-7357.87Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI9_ORYSJ9.555e-7355.70Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI3_SOLTU9.555e-7358.30Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHIA_SECCE3.631e-7258.05Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI2_SOLTU6.193e-7257.45Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_E09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933924 ID=CK933924; Name=CK933924; organism=Citrus sinensis; type=EST; length=794bp
GGGGACACCAAGCAGAGGATAATTGATATCATAACTGTTGCTTTCAAAAT
GAGGCTTATTGGGTCCTTACTAATTTTCTCTCTGGTTTTATCTTTTGTAC
TAGGAGGCTCAGCACAGAACTGTGGAAGCGGCGTTGTGTGCCCAGGAGGG
GAGTGTTGTAGTCGATTTGGTTGGTGTGGCCTAACAACAGACTACTGTTG
TGAAGGCTGCCAAAGTAACTGTAATCAGGTTGTTTGCGGTGAATGTGATC
CCGACGACGGGACGGCTGGCGATGGCGGTGAACTGGGCAAGATCATCTCA
AGGAAGATGTTTGAAGACTTGCTTGAGTATAGAAATGATAAACGATGCCC
TGCCAGATGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCAAAGCTT
TTCCAGCCTTTGGTAATTCTGGAAATGAAACCATGCGTAAAAGAGAAATT
GCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCCGA
TGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTAATAGGGAAGTTG
GTGCTGCGTCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGAAG
TACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTGCAATTACTTAAG
GTGCGGAGAAGCCTTGGGGGTGGACTGGTTGAACAATCCAGACCTACTTG
CCACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGATGACC
GCACAGCCACCAAAGCCATCGTGGCACGAAGTCATTATCGACGA
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