CK933935

Overview
NameCK933935
Unique NameCK933935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 3
Query:  426 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            +Y A A+ KLP  +F Y   GA  + TL+ N    + I  R RIL ++S + + T++ G K++MP+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    8 DYRAAAQAKLPPFLFHYIDGGAYAEHTLRRNTEDLAGIALRQRILRNMSDLSLETSLFGEKLAMPVILGPVGLTGMYARRGEVQAAKAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLY 129          
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_ECOUT (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain UTI89 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  411 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLY 129          
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL6 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6 GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  411 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLY 129          
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL5 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  411 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLY 129          
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_ECOK1 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O1:K1 / APEC GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  411 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLY 129          
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  411 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLY 129          
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_ECO7I (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  411 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLY 129          
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_ECO45 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  411 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLY 129          
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBY (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AYE) GN=lldD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 3
Query:  411 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            I++  +Y A A+ +LP  +F Y   GA  ++TL+ N    S I  R R+L D+S + + T +    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    3 ISSGNDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLY 129          
BLAST of CK933935 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBT (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=lldD PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 3
Query:  411 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 791
            I++  +Y A A+ +LP  +F Y   GA  ++TL+ N    S I  R R+L D+S + + T +    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLY
Sbjct:    3 ISSGNDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLY 129          
The following BLAST results are available for this feature:
BLAST of CK933935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
LLDD_SERP55.477e-1233.61L-lactate dehydrogenase [cytochrome] OS=Serratia p... [more]
LLDD_ECOUT5.477e-1233.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL65.477e-1233.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL55.477e-1233.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOK15.477e-1233.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO815.477e-1233.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO7I5.477e-1233.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO455.477e-1233.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ACIBY5.477e-1233.07L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBT5.477e-1233.07L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_E01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933935 ID=CK933935; Name=CK933935; organism=Citrus sinensis; type=EST; length=792bp
GGGGATTTATTTATTTATTTAAAAATTTGATAACAAGAGGGATAATGATA
ATGAAGAAGAAAAATTATGAAACACACACACCATATGCAGATGATAGCCA
CCCATTTTCCCTGATAAGATTTGTTCTCAATTTCTCACCTCCAAATGCTC
ATCCACTCAACTTGCATTTTCTTGTTTAATTTTTTTTTCTTGTCTTATAA
TTCAATCAGGCCCCTTGTTTTGTCTCCATGAAAACTTATATCTATTTTAT
TTTCTCTTTGCTTTCTATTTCTTAAATCTCCCTCTATAACTCAGTCTTTG
TTCATCATCGTCTTCTCTCCACTGGTTTCTCTGAATGCACTTTGCTGCAC
AGTCTTTGTAAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGTCAA
GATGGGGGAGATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAA
AGTTGCCAAAGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAG
TGGACTTTGCAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACC
TCGCATTCTGATTGATGTAAGCAAAATAGACATGAGTACCACTGTCTTGG
GCTTCAAGATATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAG
ATGGCTCATCCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGC
TGGAACGATTATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGG
TTGCTTCAACAGGACCTGGCATCCGCTTTTTCCAGCTCTATG
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