CK933970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29 Identity = 74/190 (38.95%), Postives = 118/190 (62.11%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALKSGEEEEXXLPDTIDVGNSS 726 L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + + LQIWDTAGQERF ++ ++YRGA +LVYD+ + KSF+N++ W A+ ++ ++LGNK D+D + RVV + K A + I +FETSAK IN+E+AF +A + L+ +E P++ +V SS Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNKCDMD--DKRVVPKGKGEQ-IAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKE---PNSENVDISS 188
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB27A_RAT (Ras-related protein Rab-27A OS=Rattus norvegicus GN=Rab27a PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29 Identity = 74/184 (40.22%), Postives = 110/184 (59.78%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALKSGE 678 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD V+ GNK D++ + R V E++AR A K IPYFETSA G N+ +A + + +K E Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRAVKEEEARE-LAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRME 186
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29 Identity = 66/165 (40.00%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 651 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K N+ + ETSA + NVEEAF+ I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAFKNI 168
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29 Identity = 66/165 (40.00%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 651 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K N+ + ETSA + NVEEAF+ I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAFKNI 168
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29 Identity = 66/165 (40.00%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 651 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K N+ + ETSA + NVEEAF+ I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAFKNI 168
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29 Identity = 66/165 (40.00%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 651 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K N+ + ETSA + NVEEAF+ I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAFKNI 168
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29 Identity = 70/170 (41.18%), Postives = 107/170 (62.94%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNAL 666 L K++++GDSGVGKT L+ ++ F+ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD + ++LGNK D++ + R VS+++ G I + E SAK +NVEEAF +A + + Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVER---MILGNKCDMN--DKRQVSKERGEKLAIDYG-IKFLEASAKSSMNVEEAFFTLARDIM 170
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29 Identity = 71/189 (37.57%), Postives = 109/189 (57.67%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAXNALKSGEEEEXXLPDTIDVGNS 723 L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + ++ E + LQIWDTAGQERF+++ A+YRGA +LVYDV KSF N+ NW A+ D+ +++GNK D+ +VV + ++ A + I + ETSAK INVEEAF +A + K + P + G + Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHAT----DSVNKMLIGNKCDM--AEKKVVDSSRGKS-LADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNEQPQVVQPGTN 196
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.362e-29 Identity = 67/166 (40.36%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 157 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 654 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + V+ + ++ LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK D+ + +VV A+A+ A + IP+ ETSAK NVE+AF +A Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS----ENVNKLLVGNKSDLT--SKKVVEYSVAKAF-ADEIGIPFLETSAKNATNVEQAFMTMA 166
BLAST of CK933970 vs. ExPASy Swiss-Prot
Match: RB32D_DICDI (Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.362e-29 Identity = 65/164 (39.63%), Postives = 103/164 (62.80%), Query Frame = 1 Query: 160 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD----NFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEA 639 LK+I++GD VGKTS++++ + KF+ +YK+TIGADFL+K D + +Q+WDTAGQE++ L AF+R +D +LV+D+++ SF NLN W ++F ++ +PD P ++L NK D +R V + + WC Y+E SAK IN++E+ Sbjct: 10 LKLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQLWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQF--KSKSINPDGTEKQLPILLLANKSD---SLTRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKES 168 The following BLAST results are available for this feature:
BLAST of CK933970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933970 ID=CK933970; Name=CK933970; organism=Citrus sinensis; type=EST; length=729bpback to top |